data_3UFE # _model_server_result.job_id zh77br7p12HxjDh2GTI6yw _model_server_result.datetime_utc '2024-11-12 20:50:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ufe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":115}' # _entry.id 3UFE # _exptl.entry_id 3UFE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.62 _cell.angle_gamma 90 _cell.entry_id 3UFE _cell.length_a 37.36 _cell.length_b 65.81 _cell.length_c 38.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UFE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3UFE _atom_sites.fract_transf_matrix[1][1] 0.026767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009542 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027726 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 112 1 CL CL . D 2 CL A 1 113 2 CL CL . E 3 PO4 A 1 114 4 PO4 PO4 . F 4 GOL A 1 115 6 GOL GOL . G 3 PO4 B 1 112 3 PO4 PO4 . H 4 GOL B 1 113 5 GOL GOL . I 5 HOH A 1 116 2 HOH HOH . I 5 HOH A 2 117 3 HOH HOH . I 5 HOH A 3 118 4 HOH HOH . I 5 HOH A 4 119 6 HOH HOH . I 5 HOH A 5 120 7 HOH HOH . I 5 HOH A 6 121 8 HOH HOH . I 5 HOH A 7 122 9 HOH HOH . I 5 HOH A 8 123 11 HOH HOH . I 5 HOH A 9 124 13 HOH HOH . I 5 HOH A 10 125 14 HOH HOH . I 5 HOH A 11 126 16 HOH HOH . I 5 HOH A 12 127 17 HOH HOH . I 5 HOH A 13 128 18 HOH HOH . I 5 HOH A 14 129 20 HOH HOH . I 5 HOH A 15 130 21 HOH HOH . I 5 HOH A 16 131 22 HOH HOH . I 5 HOH A 17 132 25 HOH HOH . I 5 HOH A 18 133 29 HOH HOH . I 5 HOH A 19 134 30 HOH HOH . I 5 HOH A 20 135 31 HOH HOH . I 5 HOH A 21 136 32 HOH HOH . I 5 HOH A 22 137 34 HOH HOH . I 5 HOH A 23 138 36 HOH HOH . I 5 HOH A 24 139 39 HOH HOH . I 5 HOH A 25 140 42 HOH HOH . I 5 HOH A 26 141 48 HOH HOH . I 5 HOH A 27 142 49 HOH HOH . I 5 HOH A 28 143 52 HOH HOH . I 5 HOH A 29 144 53 HOH HOH . I 5 HOH A 30 145 55 HOH HOH . I 5 HOH A 31 146 56 HOH HOH . I 5 HOH A 32 147 58 HOH HOH . I 5 HOH A 33 148 59 HOH HOH . I 5 HOH A 34 149 62 HOH HOH . I 5 HOH A 35 150 63 HOH HOH . I 5 HOH A 36 151 66 HOH HOH . I 5 HOH A 37 152 67 HOH HOH . I 5 HOH A 38 153 68 HOH HOH . I 5 HOH A 39 154 69 HOH HOH . I 5 HOH A 40 155 71 HOH HOH . I 5 HOH A 41 156 74 HOH HOH . I 5 HOH A 42 157 79 HOH HOH . J 5 HOH B 1 114 1 HOH HOH . J 5 HOH B 2 115 5 HOH HOH . J 5 HOH B 3 116 10 HOH HOH . J 5 HOH B 4 117 12 HOH HOH . J 5 HOH B 5 118 15 HOH HOH . J 5 HOH B 6 119 19 HOH HOH . J 5 HOH B 7 120 23 HOH HOH . J 5 HOH B 8 121 24 HOH HOH . J 5 HOH B 9 122 26 HOH HOH . J 5 HOH B 10 123 27 HOH HOH . J 5 HOH B 11 124 28 HOH HOH . J 5 HOH B 12 125 33 HOH HOH . J 5 HOH B 13 126 35 HOH HOH . J 5 HOH B 14 127 37 HOH HOH . J 5 HOH B 15 128 38 HOH HOH . J 5 HOH B 16 129 40 HOH HOH . J 5 HOH B 17 130 41 HOH HOH . J 5 HOH B 18 131 43 HOH HOH . J 5 HOH B 19 132 44 HOH HOH . J 5 HOH B 20 133 45 HOH HOH . J 5 HOH B 21 134 46 HOH HOH . J 5 HOH B 22 135 47 HOH HOH . J 5 HOH B 23 136 50 HOH HOH . J 5 HOH B 24 137 51 HOH HOH . J 5 HOH B 25 138 54 HOH HOH . J 5 HOH B 26 139 57 HOH HOH . J 5 HOH B 27 140 60 HOH HOH . J 5 HOH B 28 141 61 HOH HOH . J 5 HOH B 29 142 64 HOH HOH . J 5 HOH B 30 143 65 HOH HOH . J 5 HOH B 31 144 70 HOH HOH . J 5 HOH B 32 145 72 HOH HOH . J 5 HOH B 33 146 73 HOH HOH . J 5 HOH B 34 147 75 HOH HOH . J 5 HOH B 35 148 76 HOH HOH . J 5 HOH B 36 149 77 HOH HOH . J 5 HOH B 37 150 78 HOH HOH . J 5 HOH B 38 151 80 HOH HOH . J 5 HOH B 39 152 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 31.41 -20.095 1.367 1 46.99 ? C1 GOL 115 A 1 HETATM 2 O O1 GOL . . . F 4 32.673 -20.056 0.727 1 44.77 ? O1 GOL 115 A 1 HETATM 3 C C2 GOL . . . F 4 30.262 -19.608 0.464 1 47.48 ? C2 GOL 115 A 1 HETATM 4 O O2 GOL . . . F 4 29.882 -20.646 -0.412 1 47.15 ? O2 GOL 115 A 1 HETATM 5 C C3 GOL . . . F 4 30.575 -18.356 -0.367 1 48.36 ? C3 GOL 115 A 1 HETATM 6 O O3 GOL . . . F 4 31.03 -17.269 0.423 1 48.46 ? O3 GOL 115 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #