data_3UGR
#
_model_server_result.job_id            L58PvOn-CZM3pwMBrSbcbw 
_model_server_result.datetime_utc      '2024-11-22 19:16:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ugr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2005}' 
#
_entry.id    3UGR 
#
_exptl.entry_id    3UGR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3UGR 
_cell.length_a            55.957 
_cell.length_b            63.287 
_cell.length_c            96.394 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UGR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     3UGR 
_atom_sites.fract_transf_matrix[1][1]    0.017871 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015801 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010374 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 1001 1001 NAP NAP . 
C 3 IMN A 1 2001 2001 IMN IMN . 
D 4 DMS A 1 2002 2002 DMS DMS . 
E 5 EDO A 1 2004 2004 EDO EDO . 
F 5 EDO A 1 2005 2005 EDO EDO . 
G 6 HOH A 1 332 1 HOH HOH . 
G 6 HOH A 2 333 2 HOH HOH . 
G 6 HOH A 3 334 3 HOH HOH . 
G 6 HOH A 4 335 4 HOH HOH . 
G 6 HOH A 5 336 5 HOH HOH . 
G 6 HOH A 6 337 6 HOH HOH . 
G 6 HOH A 7 338 7 HOH HOH . 
G 6 HOH A 8 339 8 HOH HOH . 
G 6 HOH A 9 340 9 HOH HOH . 
G 6 HOH A 10 341 10 HOH HOH . 
G 6 HOH A 11 342 11 HOH HOH . 
G 6 HOH A 12 343 12 HOH HOH . 
G 6 HOH A 13 344 13 HOH HOH . 
G 6 HOH A 14 345 14 HOH HOH . 
G 6 HOH A 15 346 15 HOH HOH . 
G 6 HOH A 16 347 16 HOH HOH . 
G 6 HOH A 17 348 17 HOH HOH . 
G 6 HOH A 18 349 18 HOH HOH . 
G 6 HOH A 19 350 19 HOH HOH . 
G 6 HOH A 20 351 20 HOH HOH . 
G 6 HOH A 21 352 21 HOH HOH . 
G 6 HOH A 22 353 22 HOH HOH . 
G 6 HOH A 23 354 23 HOH HOH . 
G 6 HOH A 24 355 24 HOH HOH . 
G 6 HOH A 25 356 25 HOH HOH . 
G 6 HOH A 26 357 26 HOH HOH . 
G 6 HOH A 27 358 27 HOH HOH . 
G 6 HOH A 28 359 28 HOH HOH . 
G 6 HOH A 29 360 29 HOH HOH . 
G 6 HOH A 30 361 30 HOH HOH . 
G 6 HOH A 31 362 31 HOH HOH . 
G 6 HOH A 32 363 32 HOH HOH . 
G 6 HOH A 33 364 33 HOH HOH . 
G 6 HOH A 34 365 34 HOH HOH . 
G 6 HOH A 35 366 35 HOH HOH . 
G 6 HOH A 36 367 36 HOH HOH . 
G 6 HOH A 37 368 37 HOH HOH . 
G 6 HOH A 38 369 38 HOH HOH . 
G 6 HOH A 39 370 39 HOH HOH . 
G 6 HOH A 40 371 40 HOH HOH . 
G 6 HOH A 41 372 41 HOH HOH . 
G 6 HOH A 42 373 42 HOH HOH . 
G 6 HOH A 43 374 43 HOH HOH . 
G 6 HOH A 44 375 44 HOH HOH . 
G 6 HOH A 45 376 45 HOH HOH . 
G 6 HOH A 46 377 46 HOH HOH . 
G 6 HOH A 47 378 47 HOH HOH . 
G 6 HOH A 48 379 48 HOH HOH . 
G 6 HOH A 49 380 49 HOH HOH . 
G 6 HOH A 50 381 50 HOH HOH . 
G 6 HOH A 51 382 53 HOH HOH . 
G 6 HOH A 52 383 54 HOH HOH . 
G 6 HOH A 53 384 55 HOH HOH . 
G 6 HOH A 54 385 56 HOH HOH . 
G 6 HOH A 55 386 57 HOH HOH . 
G 6 HOH A 56 387 58 HOH HOH . 
G 6 HOH A 57 388 59 HOH HOH . 
G 6 HOH A 58 389 60 HOH HOH . 
G 6 HOH A 59 390 61 HOH HOH . 
G 6 HOH A 60 391 62 HOH HOH . 
G 6 HOH A 61 392 63 HOH HOH . 
G 6 HOH A 62 393 64 HOH HOH . 
G 6 HOH A 63 394 65 HOH HOH . 
G 6 HOH A 64 395 66 HOH HOH . 
G 6 HOH A 65 396 67 HOH HOH . 
G 6 HOH A 66 397 68 HOH HOH . 
G 6 HOH A 67 398 69 HOH HOH . 
G 6 HOH A 68 399 70 HOH HOH . 
G 6 HOH A 69 400 71 HOH HOH . 
G 6 HOH A 70 401 72 HOH HOH . 
G 6 HOH A 71 402 73 HOH HOH . 
G 6 HOH A 72 403 74 HOH HOH . 
G 6 HOH A 73 404 75 HOH HOH . 
G 6 HOH A 74 405 76 HOH HOH . 
G 6 HOH A 75 406 77 HOH HOH . 
G 6 HOH A 76 407 78 HOH HOH . 
G 6 HOH A 77 408 79 HOH HOH . 
G 6 HOH A 78 409 80 HOH HOH . 
G 6 HOH A 79 410 81 HOH HOH . 
G 6 HOH A 80 411 82 HOH HOH . 
G 6 HOH A 81 412 83 HOH HOH . 
G 6 HOH A 82 413 84 HOH HOH . 
G 6 HOH A 83 414 85 HOH HOH . 
G 6 HOH A 84 415 86 HOH HOH . 
G 6 HOH A 85 416 87 HOH HOH . 
G 6 HOH A 86 417 88 HOH HOH . 
G 6 HOH A 87 418 89 HOH HOH . 
G 6 HOH A 88 419 90 HOH HOH . 
G 6 HOH A 89 420 91 HOH HOH . 
G 6 HOH A 90 421 92 HOH HOH . 
G 6 HOH A 91 422 93 HOH HOH . 
G 6 HOH A 92 423 94 HOH HOH . 
G 6 HOH A 93 424 95 HOH HOH . 
G 6 HOH A 94 425 96 HOH HOH . 
G 6 HOH A 95 426 97 HOH HOH . 
G 6 HOH A 96 427 98 HOH HOH . 
G 6 HOH A 97 428 99 HOH HOH . 
G 6 HOH A 98 429 100 HOH HOH . 
G 6 HOH A 99 430 101 HOH HOH . 
G 6 HOH A 100 431 102 HOH HOH . 
G 6 HOH A 101 432 103 HOH HOH . 
G 6 HOH A 102 433 105 HOH HOH . 
G 6 HOH A 103 434 106 HOH HOH . 
G 6 HOH A 104 435 107 HOH HOH . 
G 6 HOH A 105 436 108 HOH HOH . 
G 6 HOH A 106 437 109 HOH HOH . 
G 6 HOH A 107 438 110 HOH HOH . 
G 6 HOH A 108 439 111 HOH HOH . 
G 6 HOH A 109 440 112 HOH HOH . 
G 6 HOH A 110 441 113 HOH HOH . 
G 6 HOH A 111 442 114 HOH HOH . 
G 6 HOH A 112 443 115 HOH HOH . 
G 6 HOH A 113 444 116 HOH HOH . 
G 6 HOH A 114 445 117 HOH HOH . 
G 6 HOH A 115 446 118 HOH HOH . 
G 6 HOH A 116 447 119 HOH HOH . 
G 6 HOH A 117 448 120 HOH HOH . 
G 6 HOH A 118 449 121 HOH HOH . 
G 6 HOH A 119 450 122 HOH HOH . 
G 6 HOH A 120 451 123 HOH HOH . 
G 6 HOH A 121 452 124 HOH HOH . 
G 6 HOH A 122 453 125 HOH HOH . 
G 6 HOH A 123 454 126 HOH HOH . 
G 6 HOH A 124 455 127 HOH HOH . 
G 6 HOH A 125 456 128 HOH HOH . 
G 6 HOH A 126 457 129 HOH HOH . 
G 6 HOH A 127 458 130 HOH HOH . 
G 6 HOH A 128 459 131 HOH HOH . 
G 6 HOH A 129 460 132 HOH HOH . 
G 6 HOH A 130 461 133 HOH HOH . 
G 6 HOH A 131 462 134 HOH HOH . 
G 6 HOH A 132 463 136 HOH HOH . 
G 6 HOH A 133 464 137 HOH HOH . 
G 6 HOH A 134 465 138 HOH HOH . 
G 6 HOH A 135 466 139 HOH HOH . 
G 6 HOH A 136 467 140 HOH HOH . 
G 6 HOH A 137 468 141 HOH HOH . 
G 6 HOH A 138 469 142 HOH HOH . 
G 6 HOH A 139 470 143 HOH HOH . 
G 6 HOH A 140 471 144 HOH HOH . 
G 6 HOH A 141 472 145 HOH HOH . 
G 6 HOH A 142 473 146 HOH HOH . 
G 6 HOH A 143 474 148 HOH HOH . 
G 6 HOH A 144 475 149 HOH HOH . 
G 6 HOH A 145 476 150 HOH HOH . 
G 6 HOH A 146 477 151 HOH HOH . 
G 6 HOH A 147 478 152 HOH HOH . 
G 6 HOH A 148 479 153 HOH HOH . 
G 6 HOH A 149 480 154 HOH HOH . 
G 6 HOH A 150 481 155 HOH HOH . 
G 6 HOH A 151 482 156 HOH HOH . 
G 6 HOH A 152 483 158 HOH HOH . 
G 6 HOH A 153 484 159 HOH HOH . 
G 6 HOH A 154 485 160 HOH HOH . 
G 6 HOH A 155 486 161 HOH HOH . 
G 6 HOH A 156 487 162 HOH HOH . 
G 6 HOH A 157 488 163 HOH HOH . 
G 6 HOH A 158 489 164 HOH HOH . 
G 6 HOH A 159 490 165 HOH HOH . 
G 6 HOH A 160 491 167 HOH HOH . 
G 6 HOH A 161 492 168 HOH HOH . 
G 6 HOH A 162 493 169 HOH HOH . 
G 6 HOH A 163 494 170 HOH HOH . 
G 6 HOH A 164 495 171 HOH HOH . 
G 6 HOH A 165 496 172 HOH HOH . 
G 6 HOH A 166 497 173 HOH HOH . 
G 6 HOH A 167 498 174 HOH HOH . 
G 6 HOH A 168 499 176 HOH HOH . 
G 6 HOH A 169 500 177 HOH HOH . 
G 6 HOH A 170 501 178 HOH HOH . 
G 6 HOH A 171 502 179 HOH HOH . 
G 6 HOH A 172 503 180 HOH HOH . 
G 6 HOH A 173 504 183 HOH HOH . 
G 6 HOH A 174 505 184 HOH HOH . 
G 6 HOH A 175 506 185 HOH HOH . 
G 6 HOH A 176 507 186 HOH HOH . 
G 6 HOH A 177 508 188 HOH HOH . 
G 6 HOH A 178 509 190 HOH HOH . 
G 6 HOH A 179 510 191 HOH HOH . 
G 6 HOH A 180 511 193 HOH HOH . 
G 6 HOH A 181 512 194 HOH HOH . 
G 6 HOH A 182 513 195 HOH HOH . 
G 6 HOH A 183 514 196 HOH HOH . 
G 6 HOH A 184 515 198 HOH HOH . 
G 6 HOH A 185 516 199 HOH HOH . 
G 6 HOH A 186 517 200 HOH HOH . 
G 6 HOH A 187 518 201 HOH HOH . 
G 6 HOH A 188 519 202 HOH HOH . 
G 6 HOH A 189 520 203 HOH HOH . 
G 6 HOH A 190 521 204 HOH HOH . 
G 6 HOH A 191 522 205 HOH HOH . 
G 6 HOH A 192 523 206 HOH HOH . 
G 6 HOH A 193 524 208 HOH HOH . 
G 6 HOH A 194 525 209 HOH HOH . 
G 6 HOH A 195 526 210 HOH HOH . 
G 6 HOH A 196 527 211 HOH HOH . 
G 6 HOH A 197 528 212 HOH HOH . 
G 6 HOH A 198 529 213 HOH HOH . 
G 6 HOH A 199 530 215 HOH HOH . 
G 6 HOH A 200 531 216 HOH HOH . 
G 6 HOH A 201 532 217 HOH HOH . 
G 6 HOH A 202 533 219 HOH HOH . 
G 6 HOH A 203 534 220 HOH HOH . 
G 6 HOH A 204 535 221 HOH HOH . 
G 6 HOH A 205 536 222 HOH HOH . 
G 6 HOH A 206 537 223 HOH HOH . 
G 6 HOH A 207 538 224 HOH HOH . 
G 6 HOH A 208 539 225 HOH HOH . 
G 6 HOH A 209 540 226 HOH HOH . 
G 6 HOH A 210 541 227 HOH HOH . 
G 6 HOH A 211 542 228 HOH HOH . 
G 6 HOH A 212 543 229 HOH HOH . 
G 6 HOH A 213 544 230 HOH HOH . 
G 6 HOH A 214 545 231 HOH HOH . 
G 6 HOH A 215 546 232 HOH HOH . 
G 6 HOH A 216 547 233 HOH HOH . 
G 6 HOH A 217 548 234 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 5 21.038 -15.154 -23.934 1 26.56 ? C1 EDO 2005 A 1 
HETATM 2 O O1 EDO . . . F 5 20.137 -14.578 -22.864 1 21.24 ? O1 EDO 2005 A 1 
HETATM 3 C C2 EDO . . . F 5 20.459 -16.509 -24.367 1 28.59 ? C2 EDO 2005 A 1 
HETATM 4 O O2 EDO . . . F 5 19.88 -16.393 -25.676 1 27.39 ? O2 EDO 2005 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#