data_3UGS # _model_server_result.job_id m5p35M0LkF_yrHm8caWFpw _model_server_result.datetime_utc '2025-07-05 16:06:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ugs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 3UGS # _exptl.entry_id 3UGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.346 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl dihydrogen phosphate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UGS _cell.length_a 60.643 _cell.length_b 67.234 _cell.length_c 118.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C15 H27 O4 P' _chem_comp.formula_weight 302.346 _chem_comp.id FFT _chem_comp.mon_nstd_flag . _chem_comp.name '(2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl dihydrogen phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'farnesyl monophosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 P FFT doub 83 n n O C14 FFT sing 84 n n O P FFT sing 85 n n C13 C14 FFT sing 86 n n C13 C11 FFT doub 87 z n C12 C11 FFT sing 88 n n O3 P FFT sing 89 n n P O1 FFT sing 90 n n C11 C10 FFT sing 91 n n C10 C9 FFT sing 92 n n C9 C8 FFT sing 93 n n C8 C6 FFT doub 94 z n C5 C6 FFT sing 95 n n C5 C4 FFT sing 96 n n C6 C7 FFT sing 97 n n C3 C4 FFT sing 98 n n C3 C1 FFT doub 99 n n C C1 FFT sing 100 n n C1 C2 FFT sing 101 n n O3 H1 FFT sing 102 n n O1 H2 FFT sing 103 n n C14 H3 FFT sing 104 n n C14 H4 FFT sing 105 n n C13 H5 FFT sing 106 n n C12 H6 FFT sing 107 n n C12 H7 FFT sing 108 n n C12 H8 FFT sing 109 n n C10 H9 FFT sing 110 n n C10 H10 FFT sing 111 n n C9 H11 FFT sing 112 n n C9 H12 FFT sing 113 n n C8 H13 FFT sing 114 n n C7 H14 FFT sing 115 n n C7 H15 FFT sing 116 n n C7 H16 FFT sing 117 n n C5 H17 FFT sing 118 n n C5 H18 FFT sing 119 n n C4 H19 FFT sing 120 n n C4 H20 FFT sing 121 n n C3 H21 FFT sing 122 n n C2 H22 FFT sing 123 n n C2 H23 FFT sing 124 n n C2 H24 FFT sing 125 n n C H25 FFT sing 126 n n C H26 FFT sing 127 n n C H27 FFT sing 128 n n # _atom_sites.entry_id 3UGS _atom_sites.fract_transf_matrix[1][1] 0.01649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FFT B 1 401 401 FFT FFT . D 2 FFT A 1 401 401 FFT FFT . E 3 HOH B 1 224 2 HOH HOH . E 3 HOH B 2 225 4 HOH HOH . E 3 HOH B 3 226 5 HOH HOH . E 3 HOH B 4 227 9 HOH HOH . E 3 HOH B 5 228 11 HOH HOH . E 3 HOH B 6 229 13 HOH HOH . E 3 HOH B 7 230 18 HOH HOH . E 3 HOH B 8 231 19 HOH HOH . E 3 HOH B 9 232 21 HOH HOH . E 3 HOH B 10 233 22 HOH HOH . E 3 HOH B 11 234 23 HOH HOH . E 3 HOH B 12 235 24 HOH HOH . E 3 HOH B 13 236 25 HOH HOH . E 3 HOH B 14 237 34 HOH HOH . E 3 HOH B 15 238 35 HOH HOH . E 3 HOH B 16 239 36 HOH HOH . E 3 HOH B 17 240 40 HOH HOH . E 3 HOH B 18 241 42 HOH HOH . E 3 HOH B 19 242 43 HOH HOH . E 3 HOH B 20 243 44 HOH HOH . E 3 HOH B 21 244 45 HOH HOH . E 3 HOH B 22 245 46 HOH HOH . E 3 HOH B 23 246 47 HOH HOH . E 3 HOH B 24 247 30 HOH HOH . E 3 HOH B 25 248 32 HOH HOH . E 3 HOH B 26 249 35 HOH HOH . E 3 HOH B 27 250 36 HOH HOH . E 3 HOH B 28 251 39 HOH HOH . E 3 HOH B 29 252 40 HOH HOH . E 3 HOH B 30 253 42 HOH HOH . E 3 HOH B 31 254 45 HOH HOH . E 3 HOH B 32 255 52 HOH HOH . E 3 HOH B 33 256 55 HOH HOH . E 3 HOH B 34 257 60 HOH HOH . E 3 HOH B 35 258 62 HOH HOH . E 3 HOH B 36 259 63 HOH HOH . F 3 HOH A 1 16 16 HOH HOH . F 3 HOH A 2 224 1 HOH HOH . F 3 HOH A 3 225 3 HOH HOH . F 3 HOH A 4 226 6 HOH HOH . F 3 HOH A 5 227 7 HOH HOH . F 3 HOH A 6 228 8 HOH HOH . F 3 HOH A 7 229 10 HOH HOH . F 3 HOH A 8 230 12 HOH HOH . F 3 HOH A 9 231 14 HOH HOH . F 3 HOH A 10 232 17 HOH HOH . F 3 HOH A 11 233 20 HOH HOH . F 3 HOH A 12 234 26 HOH HOH . F 3 HOH A 13 235 27 HOH HOH . F 3 HOH A 14 236 28 HOH HOH . F 3 HOH A 15 237 29 HOH HOH . F 3 HOH A 16 238 30 HOH HOH . F 3 HOH A 17 239 31 HOH HOH . F 3 HOH A 18 240 32 HOH HOH . F 3 HOH A 19 241 33 HOH HOH . F 3 HOH A 20 242 48 HOH HOH . F 3 HOH A 21 243 31 HOH HOH . F 3 HOH A 22 244 33 HOH HOH . F 3 HOH A 23 245 34 HOH HOH . F 3 HOH A 24 246 37 HOH HOH . F 3 HOH A 25 247 43 HOH HOH . F 3 HOH A 26 248 44 HOH HOH . F 3 HOH A 27 249 46 HOH HOH . F 3 HOH A 28 250 47 HOH HOH . F 3 HOH A 29 251 50 HOH HOH . F 3 HOH A 30 252 53 HOH HOH . F 3 HOH A 31 253 56 HOH HOH . F 3 HOH A 32 254 61 HOH HOH . F 3 HOH A 33 255 64 HOH HOH . F 3 HOH A 34 256 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 FFT . . . D 2 27.667 21.708 46.401 1 28.26 ? O3 FFT 401 A 1 HETATM 2 P P FFT . . . D 2 27.613 20.196 46.636 1 31.62 ? P FFT 401 A 1 HETATM 3 O O1 FFT . . . D 2 27.581 19.738 48.125 1 35.51 ? O1 FFT 401 A 1 HETATM 4 O O2 FFT . . . D 2 26.592 19.428 45.846 1 30.84 ? O2 FFT 401 A 1 HETATM 5 O O FFT . . . D 2 29.001 19.721 46.032 1 32.76 ? O FFT 401 A 1 HETATM 6 C C14 FFT . . . D 2 29.725 18.636 46.607 1 32.59 ? C14 FFT 401 A 1 HETATM 7 C C13 FFT . . . D 2 31.148 18.698 46.068 1 29.67 ? C13 FFT 401 A 1 HETATM 8 C C11 FFT . . . D 2 32.178 18.32 46.806 1 30.51 ? C11 FFT 401 A 1 HETATM 9 C C12 FFT . . . D 2 33.53 18.376 46.186 1 28.84 ? C12 FFT 401 A 1 HETATM 10 C C10 FFT . . . D 2 31.958 17.809 48.231 1 33.99 ? C10 FFT 401 A 1 HETATM 11 C C9 FFT . . . D 2 32.852 18.493 49.228 1 34.69 ? C9 FFT 401 A 1 HETATM 12 C C8 FFT . . . D 2 32.508 18.072 50.656 1 36.26 ? C8 FFT 401 A 1 HETATM 13 C C6 FFT . . . D 2 33.474 17.687 51.525 1 35.26 ? C6 FFT 401 A 1 HETATM 14 C C7 FFT . . . D 2 33.153 17.299 52.949 1 36.69 ? C7 FFT 401 A 1 HETATM 15 C C5 FFT . . . D 2 34.903 17.643 51.051 1 33.42 ? C5 FFT 401 A 1 HETATM 16 C C4 FFT . . . D 2 35.889 18.24 52.041 1 34.91 ? C4 FFT 401 A 1 HETATM 17 C C3 FFT . . . D 2 37.305 17.962 51.546 1 35.63 ? C3 FFT 401 A 1 HETATM 18 C C1 FFT . . . D 2 38.328 17.621 52.372 1 40.71 ? C1 FFT 401 A 1 HETATM 19 C C2 FFT . . . D 2 38.16 17.503 53.868 1 41.13 ? C2 FFT 401 A 1 HETATM 20 C C FFT . . . D 2 39.669 17.344 51.77 1 42.61 ? C FFT 401 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #