data_3UL4 # _model_server_result.job_id 2jvjiQfJ9x6oFzkKjCptQA _model_server_result.datetime_utc '2025-07-02 23:07:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ul4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":72}' # _entry.id 3UL4 # _exptl.entry_id 3UL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UL4 _cell.length_a 130.05 _cell.length_b 130.05 _cell.length_c 70.19 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 7 B ASP 7 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc2 B OD1 ASN 9 B ASN 9 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 B OD1 ASN 11 B ASN 11 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc4 B O ILE 13 B ILE 13 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc5 B OD2 ASP 18 B ASP 18 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc6 B OD1 ASP 18 B ASP 18 1_555 G CA CA . B CA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc7 B OD1 ASP 40 B ASP 40 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc8 B OD1 ASN 42 B ASN 42 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc9 B OD1 ASP 44 B ASP 44 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc10 B O LYS 46 B LYS 46 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc11 B OD1 ASP 51 B ASP 51 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc12 B OD2 ASP 51 B ASP 51 1_555 F CA CA . B CA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc13 F CA CA . B CA 66 1_555 N O HOH . B HOH 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc14 G CA CA . B CA 67 1_555 N O HOH . B HOH 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 3UL4 _atom_sites.fract_transf_matrix[1][1] 0.007689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 158 4 SO4 SO4 . D 3 SO4 A 1 159 5 SO4 SO4 . E 4 PEG A 1 160 10 PEG PEG . F 5 CA B 1 66 1 CA CA . G 5 CA B 1 67 2 CA CA . H 3 SO4 B 1 68 3 SO4 SO4 . I 3 SO4 B 1 69 69 SO4 SO4 . J 4 PEG B 1 70 7 PEG PEG . K 4 PEG B 1 71 8 PEG PEG . L 4 PEG B 1 72 9 PEG PEG . M 6 HOH A 1 161 161 HOH HOH . M 6 HOH A 2 162 162 HOH HOH . M 6 HOH A 3 163 163 HOH HOH . M 6 HOH A 4 164 164 HOH HOH . M 6 HOH A 5 165 1 HOH HOH . M 6 HOH A 6 166 166 HOH HOH . M 6 HOH A 7 167 2 HOH HOH . M 6 HOH A 8 168 168 HOH HOH . M 6 HOH A 9 169 169 HOH HOH . M 6 HOH A 10 170 4 HOH HOH . M 6 HOH A 11 171 171 HOH HOH . M 6 HOH A 12 172 172 HOH HOH . M 6 HOH A 13 173 5 HOH HOH . M 6 HOH A 14 174 174 HOH HOH . M 6 HOH A 15 175 6 HOH HOH . M 6 HOH A 16 176 176 HOH HOH . M 6 HOH A 17 177 177 HOH HOH . M 6 HOH A 18 178 178 HOH HOH . M 6 HOH A 19 179 7 HOH HOH . M 6 HOH A 20 180 8 HOH HOH . M 6 HOH A 21 181 9 HOH HOH . M 6 HOH A 22 182 10 HOH HOH . M 6 HOH A 23 183 11 HOH HOH . M 6 HOH A 24 184 12 HOH HOH . M 6 HOH A 25 185 14 HOH HOH . M 6 HOH A 26 186 15 HOH HOH . M 6 HOH A 27 187 18 HOH HOH . M 6 HOH A 28 188 19 HOH HOH . M 6 HOH A 29 189 20 HOH HOH . M 6 HOH A 30 190 21 HOH HOH . M 6 HOH A 31 191 23 HOH HOH . M 6 HOH A 32 192 24 HOH HOH . M 6 HOH A 33 193 25 HOH HOH . M 6 HOH A 34 194 26 HOH HOH . M 6 HOH A 35 195 27 HOH HOH . M 6 HOH A 36 196 29 HOH HOH . M 6 HOH A 37 197 30 HOH HOH . M 6 HOH A 38 198 31 HOH HOH . M 6 HOH A 39 199 32 HOH HOH . M 6 HOH A 40 200 34 HOH HOH . M 6 HOH A 41 201 35 HOH HOH . M 6 HOH A 42 202 36 HOH HOH . M 6 HOH A 43 203 38 HOH HOH . M 6 HOH A 44 204 39 HOH HOH . M 6 HOH A 45 205 42 HOH HOH . M 6 HOH A 46 206 43 HOH HOH . M 6 HOH A 47 207 45 HOH HOH . M 6 HOH A 48 208 46 HOH HOH . M 6 HOH A 49 209 47 HOH HOH . M 6 HOH A 50 210 49 HOH HOH . M 6 HOH A 51 211 52 HOH HOH . M 6 HOH A 52 212 53 HOH HOH . M 6 HOH A 53 213 56 HOH HOH . M 6 HOH A 54 214 57 HOH HOH . M 6 HOH A 55 215 61 HOH HOH . M 6 HOH A 56 216 62 HOH HOH . M 6 HOH A 57 217 63 HOH HOH . M 6 HOH A 58 218 64 HOH HOH . M 6 HOH A 59 219 67 HOH HOH . M 6 HOH A 60 220 68 HOH HOH . M 6 HOH A 61 221 69 HOH HOH . M 6 HOH A 62 222 70 HOH HOH . M 6 HOH A 63 223 71 HOH HOH . M 6 HOH A 64 224 72 HOH HOH . M 6 HOH A 65 225 73 HOH HOH . M 6 HOH A 66 226 74 HOH HOH . M 6 HOH A 67 227 75 HOH HOH . M 6 HOH A 68 228 76 HOH HOH . M 6 HOH A 69 229 77 HOH HOH . M 6 HOH A 70 230 78 HOH HOH . M 6 HOH A 71 231 80 HOH HOH . M 6 HOH A 72 232 81 HOH HOH . M 6 HOH A 73 233 83 HOH HOH . M 6 HOH A 74 234 85 HOH HOH . M 6 HOH A 75 235 87 HOH HOH . M 6 HOH A 76 236 88 HOH HOH . M 6 HOH A 77 237 89 HOH HOH . M 6 HOH A 78 238 91 HOH HOH . M 6 HOH A 79 239 92 HOH HOH . M 6 HOH A 80 240 93 HOH HOH . M 6 HOH A 81 241 94 HOH HOH . M 6 HOH A 82 242 96 HOH HOH . M 6 HOH A 83 243 98 HOH HOH . M 6 HOH A 84 244 100 HOH HOH . M 6 HOH A 85 245 101 HOH HOH . M 6 HOH A 86 246 104 HOH HOH . M 6 HOH A 87 247 106 HOH HOH . M 6 HOH A 88 248 108 HOH HOH . M 6 HOH A 89 249 109 HOH HOH . M 6 HOH A 90 250 110 HOH HOH . M 6 HOH A 91 251 111 HOH HOH . M 6 HOH A 92 252 114 HOH HOH . M 6 HOH A 93 253 117 HOH HOH . M 6 HOH A 94 254 118 HOH HOH . M 6 HOH A 95 255 119 HOH HOH . M 6 HOH A 96 256 120 HOH HOH . M 6 HOH A 97 257 122 HOH HOH . M 6 HOH A 98 258 123 HOH HOH . M 6 HOH A 99 259 127 HOH HOH . M 6 HOH A 100 260 130 HOH HOH . M 6 HOH A 101 261 131 HOH HOH . M 6 HOH A 102 262 133 HOH HOH . M 6 HOH A 103 263 134 HOH HOH . M 6 HOH A 104 264 136 HOH HOH . M 6 HOH A 105 265 138 HOH HOH . M 6 HOH A 106 266 139 HOH HOH . M 6 HOH A 107 267 140 HOH HOH . M 6 HOH A 108 268 141 HOH HOH . M 6 HOH A 109 269 142 HOH HOH . M 6 HOH A 110 270 143 HOH HOH . M 6 HOH A 111 271 144 HOH HOH . M 6 HOH A 112 272 149 HOH HOH . M 6 HOH A 113 273 150 HOH HOH . M 6 HOH A 114 274 152 HOH HOH . M 6 HOH A 115 275 153 HOH HOH . M 6 HOH A 116 276 154 HOH HOH . M 6 HOH A 117 277 155 HOH HOH . M 6 HOH A 118 278 156 HOH HOH . M 6 HOH A 119 279 157 HOH HOH . M 6 HOH A 120 280 158 HOH HOH . M 6 HOH A 121 281 160 HOH HOH . N 6 HOH B 1 73 3 HOH HOH . N 6 HOH B 2 74 13 HOH HOH . N 6 HOH B 3 75 16 HOH HOH . N 6 HOH B 4 76 17 HOH HOH . N 6 HOH B 5 77 22 HOH HOH . N 6 HOH B 6 78 28 HOH HOH . N 6 HOH B 7 79 79 HOH HOH . N 6 HOH B 8 80 33 HOH HOH . N 6 HOH B 9 81 37 HOH HOH . N 6 HOH B 10 82 82 HOH HOH . N 6 HOH B 11 83 40 HOH HOH . N 6 HOH B 12 84 84 HOH HOH . N 6 HOH B 13 85 41 HOH HOH . N 6 HOH B 14 86 86 HOH HOH . N 6 HOH B 15 87 44 HOH HOH . N 6 HOH B 16 88 48 HOH HOH . N 6 HOH B 17 89 50 HOH HOH . N 6 HOH B 18 90 90 HOH HOH . N 6 HOH B 19 91 51 HOH HOH . N 6 HOH B 20 92 54 HOH HOH . N 6 HOH B 21 93 55 HOH HOH . N 6 HOH B 22 94 58 HOH HOH . N 6 HOH B 23 95 95 HOH HOH . N 6 HOH B 24 96 59 HOH HOH . N 6 HOH B 25 97 97 HOH HOH . N 6 HOH B 26 98 60 HOH HOH . N 6 HOH B 27 99 99 HOH HOH . N 6 HOH B 28 100 65 HOH HOH . N 6 HOH B 29 101 66 HOH HOH . N 6 HOH B 30 102 102 HOH HOH . N 6 HOH B 31 103 103 HOH HOH . N 6 HOH B 32 105 105 HOH HOH . N 6 HOH B 33 107 107 HOH HOH . N 6 HOH B 34 112 112 HOH HOH . N 6 HOH B 35 113 113 HOH HOH . N 6 HOH B 36 115 115 HOH HOH . N 6 HOH B 37 116 116 HOH HOH . N 6 HOH B 38 121 121 HOH HOH . N 6 HOH B 39 124 124 HOH HOH . N 6 HOH B 40 125 125 HOH HOH . N 6 HOH B 41 126 126 HOH HOH . N 6 HOH B 42 128 128 HOH HOH . N 6 HOH B 43 129 129 HOH HOH . N 6 HOH B 44 132 132 HOH HOH . N 6 HOH B 45 135 135 HOH HOH . N 6 HOH B 46 137 137 HOH HOH . N 6 HOH B 47 145 145 HOH HOH . N 6 HOH B 48 146 146 HOH HOH . N 6 HOH B 49 147 147 HOH HOH . N 6 HOH B 50 148 148 HOH HOH . N 6 HOH B 51 151 151 HOH HOH . N 6 HOH B 52 159 159 HOH HOH . N 6 HOH B 53 165 165 HOH HOH . N 6 HOH B 54 167 167 HOH HOH . N 6 HOH B 55 170 170 HOH HOH . N 6 HOH B 56 173 173 HOH HOH . N 6 HOH B 57 175 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . L 4 30.466 11.963 26.114 1 57.23 ? C1 PEG 72 B 1 HETATM 2 O O1 PEG . . . L 4 31.147 11.991 24.912 1 64.65 ? O1 PEG 72 B 1 HETATM 3 C C2 PEG . . . L 4 29.73 10.709 26.445 1 55.09 ? C2 PEG 72 B 1 HETATM 4 O O2 PEG . . . L 4 30.435 9.549 26.662 1 61.82 ? O2 PEG 72 B 1 HETATM 5 C C3 PEG . . . L 4 29.733 8.396 26.962 1 44.51 ? C3 PEG 72 B 1 HETATM 6 C C4 PEG . . . L 4 30.502 7.134 27.175 1 49.28 ? C4 PEG 72 B 1 HETATM 7 O O4 PEG . . . L 4 31.161 6.567 26.096 1 65.86 ? O4 PEG 72 B 1 HETATM 8 H H11 PEG . . . L 4 31.108 12.131 26.826 1 68.67 ? H11 PEG 72 B 1 HETATM 9 H H12 PEG . . . L 4 29.823 12.693 26.107 1 68.67 ? H12 PEG 72 B 1 HETATM 10 H HO1 PEG . . . L 4 31.673 12.705 24.886 1 77.58 ? HO1 PEG 72 B 1 HETATM 11 H H21 PEG . . . L 4 29.212 10.884 27.25 1 66.1 ? H21 PEG 72 B 1 HETATM 12 H H22 PEG . . . L 4 29.102 10.539 25.722 1 66.1 ? H22 PEG 72 B 1 HETATM 13 H H31 PEG . . . L 4 29.22 8.571 27.77 1 53.41 ? H31 PEG 72 B 1 HETATM 14 H H32 PEG . . . L 4 29.097 8.243 26.241 1 53.41 ? H32 PEG 72 B 1 HETATM 15 H H41 PEG . . . L 4 31.164 7.307 27.867 1 59.13 ? H41 PEG 72 B 1 HETATM 16 H H42 PEG . . . L 4 29.881 6.469 27.519 1 59.13 ? H42 PEG 72 B 1 HETATM 17 H HO4 PEG . . . L 4 31.495 5.781 26.334 1 79.03 ? HO4 PEG 72 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #