data_3ULF # _model_server_result.job_id OhNXWJUA-1d131oo5h8tGQ _model_server_result.datetime_utc '2024-11-07 05:37:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ulf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":502}' # _entry.id 3ULF # _exptl.entry_id 3ULF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ULF _cell.length_a 73.98 _cell.length_b 73.98 _cell.length_c 176.18 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ULF _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA hexameric 6 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,O,P 1 1 C,D,J,K,Q 2 1 E,F,L,M,N,R,S 3 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 87 A CYS 254 1_555 G C4A FMN . A FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.872 ? covale ? covale2 B SG CYS 87 B CYS 254 1_555 H C4A FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? covale ? covale3 C SG CYS 87 C CYS 254 1_555 J C4A FMN . C FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? covale ? covale4 D SG CYS 87 D CYS 254 1_555 K C4A FMN . D FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.872 ? covale ? covale5 E SG CYS 87 E CYS 254 1_555 L C4A FMN . E FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? covale ? covale6 F SG CYS 87 F CYS 254 1_555 M C4A FMN . F FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 314 n n P O2 PO4 sing 315 n n P O3 PO4 sing 316 n n P O4 PO4 sing 317 n n # _atom_sites.entry_id 3ULF _atom_sites.fract_transf_matrix[1][1] 0.013517 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005676 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 FMN A 1 501 501 FMN FMN . H 2 FMN B 1 501 501 FMN FMN . I 3 PO4 B 1 502 2 PO4 PO4 . J 2 FMN C 1 501 501 FMN FMN . K 2 FMN D 1 501 501 FMN FMN . L 2 FMN E 1 501 501 FMN FMN . M 2 FMN F 1 501 501 FMN FMN . N 3 PO4 F 1 502 1 PO4 PO4 . O 4 HOH A 1 601 1 HOH HOH . O 4 HOH A 2 602 22 HOH HOH . O 4 HOH A 3 603 56 HOH HOH . O 4 HOH A 4 604 58 HOH HOH . O 4 HOH A 5 605 59 HOH HOH . O 4 HOH A 6 606 88 HOH HOH . O 4 HOH A 7 607 89 HOH HOH . O 4 HOH A 8 608 90 HOH HOH . O 4 HOH A 9 609 91 HOH HOH . O 4 HOH A 10 610 92 HOH HOH . O 4 HOH A 11 611 113 HOH HOH . O 4 HOH A 12 612 121 HOH HOH . O 4 HOH A 13 613 125 HOH HOH . O 4 HOH A 14 614 126 HOH HOH . O 4 HOH A 15 615 127 HOH HOH . O 4 HOH A 16 616 128 HOH HOH . O 4 HOH A 17 617 129 HOH HOH . O 4 HOH A 18 618 130 HOH HOH . O 4 HOH A 19 619 131 HOH HOH . O 4 HOH A 20 620 132 HOH HOH . O 4 HOH A 21 621 134 HOH HOH . O 4 HOH A 22 622 135 HOH HOH . O 4 HOH A 23 623 138 HOH HOH . O 4 HOH A 24 624 139 HOH HOH . O 4 HOH A 25 625 140 HOH HOH . O 4 HOH A 26 626 117 HOH HOH . P 4 HOH B 1 601 33 HOH HOH . P 4 HOH B 2 602 84 HOH HOH . P 4 HOH B 3 603 85 HOH HOH . P 4 HOH B 4 604 86 HOH HOH . P 4 HOH B 5 605 87 HOH HOH . P 4 HOH B 6 606 93 HOH HOH . P 4 HOH B 7 607 94 HOH HOH . P 4 HOH B 8 608 95 HOH HOH . P 4 HOH B 9 609 96 HOH HOH . P 4 HOH B 10 610 97 HOH HOH . P 4 HOH B 11 611 98 HOH HOH . P 4 HOH B 12 612 99 HOH HOH . P 4 HOH B 13 613 100 HOH HOH . P 4 HOH B 14 614 101 HOH HOH . P 4 HOH B 15 615 102 HOH HOH . P 4 HOH B 16 616 103 HOH HOH . P 4 HOH B 17 617 123 HOH HOH . P 4 HOH B 18 618 124 HOH HOH . P 4 HOH B 19 619 137 HOH HOH . Q 4 HOH C 1 601 104 HOH HOH . R 4 HOH E 1 601 64 HOH HOH . R 4 HOH E 2 602 105 HOH HOH . R 4 HOH E 3 603 106 HOH HOH . R 4 HOH E 4 604 107 HOH HOH . R 4 HOH E 5 605 108 HOH HOH . R 4 HOH E 6 606 110 HOH HOH . R 4 HOH E 7 607 111 HOH HOH . R 4 HOH E 8 608 112 HOH HOH . R 4 HOH E 9 609 114 HOH HOH . R 4 HOH E 10 610 115 HOH HOH . R 4 HOH E 11 611 133 HOH HOH . R 4 HOH E 12 612 136 HOH HOH . R 4 HOH E 13 613 141 HOH HOH . R 4 HOH E 14 614 142 HOH HOH . S 4 HOH F 1 601 66 HOH HOH . S 4 HOH F 2 602 67 HOH HOH . S 4 HOH F 3 603 69 HOH HOH . S 4 HOH F 4 604 78 HOH HOH . S 4 HOH F 5 605 79 HOH HOH . S 4 HOH F 6 606 80 HOH HOH . S 4 HOH F 7 607 81 HOH HOH . S 4 HOH F 8 608 82 HOH HOH . S 4 HOH F 9 609 83 HOH HOH . S 4 HOH F 10 610 109 HOH HOH . S 4 HOH F 11 611 116 HOH HOH . S 4 HOH F 12 612 118 HOH HOH . S 4 HOH F 13 613 119 HOH HOH . S 4 HOH F 14 614 120 HOH HOH . S 4 HOH F 15 615 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . N 3 24.979 -50.879 -12.532 1 124.34 ? P PO4 502 F 1 HETATM 2 O O1 PO4 . . . N 3 25.901 -52.041 -12.837 1 118.48 ? O1 PO4 502 F 1 HETATM 3 O O2 PO4 . . . N 3 25.013 -49.923 -13.708 1 100.78 ? O2 PO4 502 F 1 HETATM 4 O O3 PO4 . . . N 3 23.575 -51.395 -12.319 1 125.37 ? O3 PO4 502 F 1 HETATM 5 O O4 PO4 . . . N 3 25.399 -50.187 -11.246 1 133.48 ? O4 PO4 502 F 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #