data_3UNG
#
_model_server_result.job_id            Ixl_7tbpbtEfjbi2Llx0uA 
_model_server_result.datetime_utc      '2024-10-10 22:29:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ung 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":904}' 
#
_entry.id    3UNG 
#
_exptl.entry_id    3UNG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3UNG 
_cell.length_a            73.167 
_cell.length_b            85.07 
_cell.length_c            140.087 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UNG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 270 C CYS 448 1_555 D ZN ZN . C ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc2 A SG CYS 273 C CYS 451 1_555 D ZN ZN . C ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc3 A SG CYS 300 C CYS 478 1_555 D ZN ZN . C ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc4 A SG CYS 303 C CYS 481 1_555 D ZN ZN . C ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc5 A OD1 ASP 422 C ASP 600 1_555 B CA CA . C CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.105 ? 
metalc ? metalc6 A OD1 ASP 422 C ASP 600 1_555 C CA CA . C CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? 
metalc ? metalc7 A OD2 ASP 422 C ASP 600 1_555 C CA CA . C CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? 
metalc ? metalc8 A O GLY 423 C GLY 601 1_555 C CA CA . C CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc9 A OD2 ASP 495 C ASP 673 1_555 B CA CA . C CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? 
metalc ? metalc10 A OD1 ASP 495 C ASP 673 1_555 C CA CA . C CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? 
metalc ? metalc11 A OD1 ASP 496 C ASP 674 1_555 B CA CA . C CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? 
metalc ? metalc12 A OD2 ASP 496 C ASP 674 1_555 B CA CA . C CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? 
metalc ? metalc13 B CA CA . C CA 901 1_555 E O1B ADP . C ADP 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? 
metalc ? metalc14 B CA CA . C CA 901 1_555 F O HOH . C HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.157 ? 
metalc ? metalc15 C CA CA . C CA 902 1_555 F O HOH . C HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? 
metalc ? metalc16 C CA CA . C CA 902 1_555 F O HOH . C HOH 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     3UNG 
_atom_sites.fract_transf_matrix[1][1]    0.013667 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011755 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007138 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA C 1 901 1 CA CA . 
C 2 CA C 1 902 2 CA CA . 
D 3 ZN C 1 903 1 ZN ZN . 
E 4 ADP C 1 904 602 ADP ADP . 
F 5 HOH C 1 1001 1 HOH HOH . 
F 5 HOH C 2 1002 2 HOH HOH . 
F 5 HOH C 3 1003 3 HOH HOH . 
F 5 HOH C 4 1004 4 HOH HOH . 
F 5 HOH C 5 1005 5 HOH HOH . 
F 5 HOH C 6 1006 6 HOH HOH . 
F 5 HOH C 7 1007 7 HOH HOH . 
F 5 HOH C 8 1008 8 HOH HOH . 
F 5 HOH C 9 1009 9 HOH HOH . 
F 5 HOH C 10 1010 10 HOH HOH . 
F 5 HOH C 11 1011 11 HOH HOH . 
F 5 HOH C 12 1012 12 HOH HOH . 
F 5 HOH C 13 1013 13 HOH HOH . 
F 5 HOH C 14 1014 14 HOH HOH . 
F 5 HOH C 15 1015 15 HOH HOH . 
F 5 HOH C 16 1016 16 HOH HOH . 
F 5 HOH C 17 1017 17 HOH HOH . 
F 5 HOH C 18 1018 18 HOH HOH . 
F 5 HOH C 19 1019 19 HOH HOH . 
F 5 HOH C 20 1020 20 HOH HOH . 
F 5 HOH C 21 1021 21 HOH HOH . 
F 5 HOH C 22 1022 22 HOH HOH . 
F 5 HOH C 23 1023 23 HOH HOH . 
F 5 HOH C 24 1024 24 HOH HOH . 
F 5 HOH C 25 1025 25 HOH HOH . 
F 5 HOH C 26 1026 26 HOH HOH . 
F 5 HOH C 27 1027 27 HOH HOH . 
F 5 HOH C 28 1028 28 HOH HOH . 
F 5 HOH C 29 1029 29 HOH HOH . 
F 5 HOH C 30 1030 30 HOH HOH . 
F 5 HOH C 31 1031 31 HOH HOH . 
F 5 HOH C 32 1032 32 HOH HOH . 
F 5 HOH C 33 1033 33 HOH HOH . 
F 5 HOH C 34 1034 34 HOH HOH . 
F 5 HOH C 35 1035 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . E 4 15.312 30.128 6.563 1 173.81 ? PB ADP 904 C 1 
HETATM 2 O O1B ADP . . . E 4 13.806 30.128 6.468 1 168.36 ? O1B ADP 904 C 1 
HETATM 3 O O2B ADP . . . E 4 15.931 31.425 6.095 1 175.1 ? O2B ADP 904 C 1 
HETATM 4 O O3B ADP . . . E 4 15.98 28.887 6.023 1 166.8 ? O3B ADP 904 C 1 
HETATM 5 P PA ADP . . . E 4 14.757 30.884 9.233 1 168.66 ? PA ADP 904 C 1 
HETATM 6 O O1A ADP . . . E 4 13.87 31.849 8.477 1 165.75 ? O1A ADP 904 C 1 
HETATM 7 O O2A ADP . . . E 4 15.688 31.396 10.31 1 148.89 ? O2A ADP 904 C 1 
HETATM 8 O O3A ADP . . . E 4 15.653 30.098 8.143 1 263.69 ? O3A ADP 904 C 1 
HETATM 9 O O5' ADP . . . E 4 13.79 29.76 9.884 1 153.8 ? O5' ADP 904 C 1 
HETATM 10 C C5' ADP . . . E 4 14.101 29.063 11.099 1 132.59 ? C5' ADP 904 C 1 
HETATM 11 C C4' ADP . . . E 4 13.428 27.69 11.074 1 105.42 ? C4' ADP 904 C 1 
HETATM 12 O O4' ADP . . . E 4 12.985 27.287 12.371 1 90.58 ? O4' ADP 904 C 1 
HETATM 13 C C3' ADP . . . E 4 12.203 27.69 10.177 1 105.25 ? C3' ADP 904 C 1 
HETATM 14 O O3' ADP . . . E 4 12.475 26.945 8.989 1 122.01 ? O3' ADP 904 C 1 
HETATM 15 C C2' ADP . . . E 4 11.112 26.992 10.953 1 97.84 ? C2' ADP 904 C 1 
HETATM 16 O O2' ADP . . . E 4 10.691 25.834 10.232 1 104.49 ? O2' ADP 904 C 1 
HETATM 17 C C1' ADP . . . E 4 11.74 26.586 12.275 1 87.2 ? C1' ADP 904 C 1 
HETATM 18 N N9 ADP . . . E 4 10.804 26.891 13.405 1 88.74 ? N9 ADP 904 C 1 
HETATM 19 C C8 ADP . . . E 4 10.496 28.109 13.912 1 91.18 ? C8 ADP 904 C 1 
HETATM 20 N N7 ADP . . . E 4 9.598 28.028 14.936 1 67.92 ? N7 ADP 904 C 1 
HETATM 21 C C5 ADP . . . E 4 9.311 26.721 15.104 1 64.76 ? C5 ADP 904 C 1 
HETATM 22 C C6 ADP . . . E 4 8.45 25.914 16.011 1 59.58 ? C6 ADP 904 C 1 
HETATM 23 N N6 ADP . . . E 4 7.67 26.478 16.98 1 55.67 ? N6 ADP 904 C 1 
HETATM 24 N N1 ADP . . . E 4 8.461 24.575 15.832 1 60.05 ? N1 ADP 904 C 1 
HETATM 25 C C2 ADP . . . E 4 9.202 23.973 14.886 1 55.66 ? C2 ADP 904 C 1 
HETATM 26 N N3 ADP . . . E 4 10.008 24.633 14.042 1 63.37 ? N3 ADP 904 C 1 
HETATM 27 C C4 ADP . . . E 4 10.104 25.983 14.094 1 71.43 ? C4 ADP 904 C 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           27 
#