data_3UO6 # _model_server_result.job_id NEUK2VBkxAFEXgmm1lMwBA _model_server_result.datetime_utc '2024-12-26 11:09:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uo6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3UO6 # _exptl.entry_id 3UO6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3UO6 _cell.length_a 85.7 _cell.length_b 85.7 _cell.length_c 76.65 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UO6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,B,C,D,E,F,G,H,I,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 122 n n C1 C2 EDO sing 123 n n C1 H11 EDO sing 124 n n C1 H12 EDO sing 125 n n O1 HO1 EDO sing 126 n n C2 O2 EDO sing 127 n n C2 H21 EDO sing 128 n n C2 H22 EDO sing 129 n n O2 HO2 EDO sing 130 n n # _atom_sites.entry_id 3UO6 _atom_sites.fract_transf_matrix[1][1] 0.011669 _atom_sites.fract_transf_matrix[1][2] 0.006737 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0BY A 1 1 1 0BY INH . D 3 EDO A 1 2 2 EDO EDO . E 3 EDO A 1 3 3 EDO EDO . F 2 0BY B 1 2 2 0BY INH . G 3 EDO B 1 1 1 EDO EDO . H 3 EDO B 1 4 4 EDO EDO . I 4 HOH A 1 8 8 HOH HOH . I 4 HOH A 2 9 9 HOH HOH . I 4 HOH A 3 10 10 HOH HOH . I 4 HOH A 4 13 13 HOH HOH . I 4 HOH A 5 15 15 HOH HOH . I 4 HOH A 6 16 16 HOH HOH . I 4 HOH A 7 18 18 HOH HOH . I 4 HOH A 8 402 1 HOH HOH . I 4 HOH A 9 403 2 HOH HOH . J 4 HOH B 1 3 3 HOH HOH . J 4 HOH B 2 5 5 HOH HOH . J 4 HOH B 3 6 6 HOH HOH . J 4 HOH B 4 7 7 HOH HOH . J 4 HOH B 5 11 11 HOH HOH . J 4 HOH B 6 12 12 HOH HOH . J 4 HOH B 7 14 14 HOH HOH . J 4 HOH B 8 17 17 HOH HOH . J 4 HOH B 9 19 19 HOH HOH . J 4 HOH B 10 20 20 HOH HOH . J 4 HOH B 11 21 21 HOH HOH . J 4 HOH B 12 402 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 15.496 26.107 13.385 1 48.56 ? C1 EDO 2 A 1 HETATM 2 O O1 EDO . . . D 3 14.507 26.031 14.46 1 71.63 ? O1 EDO 2 A 1 HETATM 3 C C2 EDO . . . D 3 16.504 27.225 13.701 1 40.46 ? C2 EDO 2 A 1 HETATM 4 O O2 EDO . . . D 3 15.794 28.299 14.371 1 55.17 ? O2 EDO 2 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #