data_3UP8 # _model_server_result.job_id TRY5VvROM9PNJtVbocojFg _model_server_result.datetime_utc '2024-12-13 02:31:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3up8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":276}' # _entry.id 3UP8 # _exptl.entry_id 3UP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UP8 _cell.length_a 57.283 _cell.length_b 88.768 _cell.length_c 123.638 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 22 A SER -1 1_555 A N MSE 23 A MSE 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 23 A MSE 0 1_555 A N MSE 24 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MSE 24 A MSE 1 1_555 A N HIS 25 A HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C ARG 43 A ARG 20 1_555 A N MSE 44 A MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C MSE 44 A MSE 21 1_555 A N SER 45 A SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C PRO 135 A PRO 112 1_555 A N MSE 136 A MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 A C MSE 136 A MSE 113 1_555 A N ALA 137 A ALA 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C GLN 164 A GLN 141 1_555 A N MSE 165 A MSE 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C MSE 165 A MSE 142 1_555 A N GLU 166 A GLU 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale10 A C GLY 200 A GLY 177 1_555 A N MSE 201 A MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 A C MSE 201 A MSE 178 1_555 A N SER 202 A SER 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 A C ALA 208 A ALA 185 1_555 A N MSE 209 A MSE 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 A C MSE 209 A MSE 186 1_555 A N ALA 210 A ALA 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale14 A C GLU 272 A GLU 249 1_555 A N MSE 273 A MSE 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale15 A C MSE 273 A MSE 250 1_555 A N ALA 274 A ALA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale16 B C SER 22 B SER -1 1_555 B N MSE 23 B MSE 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 B C MSE 23 B MSE 0 1_555 B N MSE 24 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C MSE 24 B MSE 1 1_555 B N HIS 25 B HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale19 B C ARG 43 B ARG 20 1_555 B N MSE 44 B MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale20 B C MSE 44 B MSE 21 1_555 B N SER 45 B SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale21 B C PRO 135 B PRO 112 1_555 B N MSE 136 B MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale22 B C MSE 136 B MSE 113 1_555 B N ALA 137 B ALA 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale23 B C GLN 164 B GLN 141 1_555 B N MSE 165 B MSE 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale24 B C MSE 165 B MSE 142 1_555 B N GLU 166 B GLU 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 B C GLY 200 B GLY 177 1_555 B N MSE 201 B MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale26 B C MSE 201 B MSE 178 1_555 B N SER 202 B SER 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale27 B C ALA 208 B ALA 185 1_555 B N MSE 209 B MSE 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale28 B C MSE 209 B MSE 186 1_555 B N ALA 210 B ALA 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale29 B C GLU 272 B GLU 249 1_555 B N MSE 273 B MSE 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale30 B C MSE 273 B MSE 250 1_555 B N ALA 274 B ALA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3UP8 _atom_sites.fract_transf_matrix[1][1] 0.017457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 276 1 ACT ACT . D 2 ACT B 1 276 2 ACT ACT . E 3 HOH A 1 277 3 HOH HOH . E 3 HOH A 2 278 4 HOH HOH . E 3 HOH A 3 279 5 HOH HOH . E 3 HOH A 4 280 6 HOH HOH . E 3 HOH A 5 281 7 HOH HOH . E 3 HOH A 6 282 9 HOH HOH . E 3 HOH A 7 283 10 HOH HOH . E 3 HOH A 8 284 11 HOH HOH . E 3 HOH A 9 285 12 HOH HOH . E 3 HOH A 10 286 14 HOH HOH . E 3 HOH A 11 287 16 HOH HOH . E 3 HOH A 12 288 17 HOH HOH . E 3 HOH A 13 289 18 HOH HOH . E 3 HOH A 14 290 19 HOH HOH . E 3 HOH A 15 291 21 HOH HOH . E 3 HOH A 16 292 22 HOH HOH . E 3 HOH A 17 293 23 HOH HOH . E 3 HOH A 18 294 24 HOH HOH . E 3 HOH A 19 295 25 HOH HOH . E 3 HOH A 20 296 26 HOH HOH . E 3 HOH A 21 297 27 HOH HOH . E 3 HOH A 22 298 28 HOH HOH . E 3 HOH A 23 299 29 HOH HOH . E 3 HOH A 24 300 30 HOH HOH . E 3 HOH A 25 301 31 HOH HOH . E 3 HOH A 26 302 32 HOH HOH . E 3 HOH A 27 303 33 HOH HOH . E 3 HOH A 28 304 35 HOH HOH . E 3 HOH A 29 305 41 HOH HOH . E 3 HOH A 30 306 42 HOH HOH . E 3 HOH A 31 307 43 HOH HOH . E 3 HOH A 32 308 45 HOH HOH . E 3 HOH A 33 309 46 HOH HOH . E 3 HOH A 34 310 47 HOH HOH . E 3 HOH A 35 311 50 HOH HOH . E 3 HOH A 36 312 51 HOH HOH . E 3 HOH A 37 313 52 HOH HOH . E 3 HOH A 38 314 53 HOH HOH . E 3 HOH A 39 315 54 HOH HOH . E 3 HOH A 40 316 56 HOH HOH . E 3 HOH A 41 317 57 HOH HOH . E 3 HOH A 42 318 59 HOH HOH . E 3 HOH A 43 319 60 HOH HOH . E 3 HOH A 44 320 61 HOH HOH . E 3 HOH A 45 321 62 HOH HOH . E 3 HOH A 46 322 64 HOH HOH . E 3 HOH A 47 323 65 HOH HOH . E 3 HOH A 48 324 66 HOH HOH . E 3 HOH A 49 325 67 HOH HOH . E 3 HOH A 50 326 69 HOH HOH . E 3 HOH A 51 327 73 HOH HOH . E 3 HOH A 52 328 74 HOH HOH . E 3 HOH A 53 329 75 HOH HOH . E 3 HOH A 54 330 77 HOH HOH . E 3 HOH A 55 331 79 HOH HOH . E 3 HOH A 56 332 81 HOH HOH . E 3 HOH A 57 333 84 HOH HOH . E 3 HOH A 58 334 85 HOH HOH . E 3 HOH A 59 335 86 HOH HOH . E 3 HOH A 60 336 87 HOH HOH . E 3 HOH A 61 337 89 HOH HOH . E 3 HOH A 62 338 90 HOH HOH . E 3 HOH A 63 339 91 HOH HOH . E 3 HOH A 64 340 93 HOH HOH . E 3 HOH A 65 341 94 HOH HOH . E 3 HOH A 66 342 95 HOH HOH . E 3 HOH A 67 343 96 HOH HOH . E 3 HOH A 68 344 97 HOH HOH . E 3 HOH A 69 345 99 HOH HOH . E 3 HOH A 70 346 100 HOH HOH . E 3 HOH A 71 347 103 HOH HOH . E 3 HOH A 72 348 104 HOH HOH . E 3 HOH A 73 349 105 HOH HOH . E 3 HOH A 74 350 106 HOH HOH . E 3 HOH A 75 351 107 HOH HOH . E 3 HOH A 76 352 108 HOH HOH . E 3 HOH A 77 353 110 HOH HOH . E 3 HOH A 78 354 111 HOH HOH . E 3 HOH A 79 355 113 HOH HOH . E 3 HOH A 80 356 115 HOH HOH . E 3 HOH A 81 357 116 HOH HOH . E 3 HOH A 82 358 118 HOH HOH . E 3 HOH A 83 359 120 HOH HOH . E 3 HOH A 84 360 123 HOH HOH . E 3 HOH A 85 361 125 HOH HOH . E 3 HOH A 86 362 126 HOH HOH . E 3 HOH A 87 363 128 HOH HOH . E 3 HOH A 88 364 130 HOH HOH . E 3 HOH A 89 365 132 HOH HOH . E 3 HOH A 90 366 134 HOH HOH . E 3 HOH A 91 367 136 HOH HOH . E 3 HOH A 92 368 139 HOH HOH . E 3 HOH A 93 369 140 HOH HOH . E 3 HOH A 94 370 142 HOH HOH . E 3 HOH A 95 371 143 HOH HOH . F 3 HOH B 1 277 8 HOH HOH . F 3 HOH B 2 278 13 HOH HOH . F 3 HOH B 3 279 15 HOH HOH . F 3 HOH B 4 280 20 HOH HOH . F 3 HOH B 5 281 34 HOH HOH . F 3 HOH B 6 282 36 HOH HOH . F 3 HOH B 7 283 37 HOH HOH . F 3 HOH B 8 284 38 HOH HOH . F 3 HOH B 9 285 39 HOH HOH . F 3 HOH B 10 286 40 HOH HOH . F 3 HOH B 11 287 44 HOH HOH . F 3 HOH B 12 288 48 HOH HOH . F 3 HOH B 13 289 49 HOH HOH . F 3 HOH B 14 290 55 HOH HOH . F 3 HOH B 15 291 58 HOH HOH . F 3 HOH B 16 292 63 HOH HOH . F 3 HOH B 17 293 68 HOH HOH . F 3 HOH B 18 294 70 HOH HOH . F 3 HOH B 19 295 71 HOH HOH . F 3 HOH B 20 296 72 HOH HOH . F 3 HOH B 21 297 76 HOH HOH . F 3 HOH B 22 298 78 HOH HOH . F 3 HOH B 23 299 80 HOH HOH . F 3 HOH B 24 300 82 HOH HOH . F 3 HOH B 25 301 83 HOH HOH . F 3 HOH B 26 302 92 HOH HOH . F 3 HOH B 27 303 98 HOH HOH . F 3 HOH B 28 304 101 HOH HOH . F 3 HOH B 29 305 102 HOH HOH . F 3 HOH B 30 306 109 HOH HOH . F 3 HOH B 31 307 114 HOH HOH . F 3 HOH B 32 308 121 HOH HOH . F 3 HOH B 33 309 124 HOH HOH . F 3 HOH B 34 310 127 HOH HOH . F 3 HOH B 35 311 129 HOH HOH . F 3 HOH B 36 312 133 HOH HOH . F 3 HOH B 37 313 135 HOH HOH . F 3 HOH B 38 314 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 2 4.512 -11.132 -46.223 1 31.94 ? C ACT 276 B 1 HETATM 2 O O ACT . . . D 2 4.971 -11.549 -45.139 1 32.14 ? O ACT 276 B 1 HETATM 3 O OXT ACT . . . D 2 3.269 -11.198 -46.381 1 31.46 ? OXT ACT 276 B 1 HETATM 4 C CH3 ACT . . . D 2 5.419 -10.571 -47.27 1 31.94 ? CH3 ACT 276 B 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #