data_3UPC
#
_model_server_result.job_id            BINQCWSKtGpxdPPV2RshBQ 
_model_server_result.datetime_utc      '2024-10-18 16:32:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3upc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":116}' 
#
_entry.id    3UPC 
#
_exptl.entry_id    3UPC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3UPC 
_cell.length_a            82.61 
_cell.length_b            143.12 
_cell.length_c            145.61 
_cell.Z_PDB               40 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UPC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
? monomeric 1 author_defined_assembly 7 
? monomeric 1 author_defined_assembly 8 
? monomeric 1 author_defined_assembly 9 
? monomeric 1 author_defined_assembly 10 
PISA dimeric 2 software_defined_assembly 11 
PISA dimeric 2 software_defined_assembly 12 
PISA dimeric 2 software_defined_assembly 13 
PISA dimeric 2 software_defined_assembly 14 
PISA dimeric 2 software_defined_assembly 15 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,K 1 1 
B,L 2 1 
C,M 3 1 
D,N 4 1 
E 5 1 
F 6 1 
G,O 7 1 
H,P 8 1 
I,Q 9 1 
J 10 1 
A,B,K,L 11 1 
C,D,M,N 12 1 
E,I,Q 13 1 
F,J 14 1 
G,H,O,P 15 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             L 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 20 A CYS 22 1_555 A SG CYS 94 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf2 B SG CYS 20 B CYS 22 1_555 B SG CYS 94 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
disulf ? disulf3 C SG CYS 20 C CYS 22 1_555 C SG CYS 94 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf4 D SG CYS 20 D CYS 22 1_555 D SG CYS 94 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 E SG CYS 20 E CYS 22 1_555 E SG CYS 94 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf6 F SG CYS 20 F CYS 22 1_555 F SG CYS 94 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf7 G SG CYS 20 G CYS 22 1_555 G SG CYS 94 G CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf8 H SG CYS 20 H CYS 22 1_555 H SG CYS 94 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
disulf ? disulf9 I SG CYS 20 I CYS 22 1_555 I SG CYS 94 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf10 J SG CYS 20 J CYS 22 1_555 J SG CYS 94 J CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 297 n n 
C1 C2 PGE sing 298 n n 
C1 H1 PGE sing 299 n n 
C1 H12 PGE sing 300 n n 
O1 HO1 PGE sing 301 n n 
C2 O2 PGE sing 302 n n 
C2 H2 PGE sing 303 n n 
C2 H22 PGE sing 304 n n 
O2 C3 PGE sing 305 n n 
C3 C4 PGE sing 306 n n 
C3 H3 PGE sing 307 n n 
C3 H32 PGE sing 308 n n 
C4 O3 PGE sing 309 n n 
C4 H4 PGE sing 310 n n 
C4 H42 PGE sing 311 n n 
O4 C6 PGE sing 312 n n 
O4 HO4 PGE sing 313 n n 
C6 C5 PGE sing 314 n n 
C6 H6 PGE sing 315 n n 
C6 H62 PGE sing 316 n n 
C5 O3 PGE sing 317 n n 
C5 H5 PGE sing 318 n n 
C5 H52 PGE sing 319 n n 
#
_atom_sites.entry_id                     3UPC 
_atom_sites.fract_transf_matrix[1][1]    0.012105 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006987 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 1PE A 1 2 2 1PE 1PE . 
L 3 PGE B 1 116 6 PGE PGE . 
M 4 PEG C 1 116 7 PEG PEG . 
N 2 1PE D 1 116 3 1PE 1PE . 
O 5 PG4 G 1 116 4 PG4 PG4 . 
P 5 PG4 H 1 1 1 PG4 PG4 . 
Q 5 PG4 I 1 116 5 PG4 PG4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . L 3 -1.53 -30.325 5.633 1 47.77 ? C1 PGE 116 B 1 
HETATM 2 O O1 PGE . . . L 3 -0.689 -29.235 6.083 1 43.3 ? O1 PGE 116 B 1 
HETATM 3 C C2 PGE . . . L 3 -2.145 -30.076 4.235 1 52.03 ? C2 PGE 116 B 1 
HETATM 4 O O2 PGE . . . L 3 -2.386 -31.318 3.536 1 57.98 ? O2 PGE 116 B 1 
HETATM 5 C C3 PGE . . . L 3 -2.802 -31.222 2.156 1 43.87 ? C3 PGE 116 B 1 
HETATM 6 C C4 PGE . . . L 3 -2.567 -32.558 1.404 1 41.84 ? C4 PGE 116 B 1 
HETATM 7 O O4 PGE . . . L 3 -0.672 -32.295 -3.088 1 29.62 ? O4 PGE 116 B 1 
HETATM 8 C C6 PGE . . . L 3 -0.844 -32.965 -1.811 1 35.15 ? C6 PGE 116 B 1 
HETATM 9 C C5 PGE . . . L 3 -1.39 -32.025 -0.723 1 36.95 ? C5 PGE 116 B 1 
HETATM 10 O O3 PGE . . . L 3 -1.395 -32.672 0.563 1 42.79 ? O3 PGE 116 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#