data_3USG # _model_server_result.job_id o--frphwjp1RrBG3vNZ_uQ _model_server_result.datetime_utc '2024-11-23 11:02:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":522}' # _entry.id 3USG # _exptl.entry_id 3USG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.308 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.78 _cell.angle_gamma 90 _cell.entry_id 3USG _cell.length_a 123.814 _cell.length_b 90.859 _cell.length_c 81.645 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 104.366614 0 79.295052 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 H NA NA . A NA 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 H NA NA . A NA 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc5 A O THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc6 A OG1 THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 H NA NA . A NA 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 H NA NA . A NA 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 H NA NA . A NA 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc11 B O LEU . A LEU 601 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? # _chem_comp.formula 'C11 H24' _chem_comp.formula_weight 156.308 _chem_comp.id UND _chem_comp.mon_nstd_flag . _chem_comp.name UNDECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 UND sing 392 n n C1 H11 UND sing 393 n n C1 H12 UND sing 394 n n C1 H13 UND sing 395 n n C2 C3 UND sing 396 n n C2 H21 UND sing 397 n n C2 H22 UND sing 398 n n C3 C4 UND sing 399 n n C3 H31 UND sing 400 n n C3 H32 UND sing 401 n n C4 C5 UND sing 402 n n C4 H41 UND sing 403 n n C4 H42 UND sing 404 n n C5 C6 UND sing 405 n n C5 H51 UND sing 406 n n C5 H52 UND sing 407 n n C6 C7 UND sing 408 n n C6 H61 UND sing 409 n n C6 H62 UND sing 410 n n C7 C8 UND sing 411 n n C7 H71 UND sing 412 n n C7 H72 UND sing 413 n n C8 C9 UND sing 414 n n C8 H81 UND sing 415 n n C8 H82 UND sing 416 n n C9 C10 UND sing 417 n n C9 H91 UND sing 418 n n C9 H92 UND sing 419 n n C10 C11 UND sing 420 n n C10 H101 UND sing 421 n n C10 H102 UND sing 422 n n C11 H111 UND sing 423 n n C11 H112 UND sing 424 n n C11 H113 UND sing 425 n n # _atom_sites.entry_id 3USG _atom_sites.fract_transf_matrix[1][1] 0.008077 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001981 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LEU A 1 601 601 LEU LEU . C 3 NA A 1 752 752 NA NA . D 4 ACT A 1 520 1 ACT ACT . E 5 PEG A 1 521 1 PEG PEG . F 6 UND A 1 522 1 UND UND . G 7 PC A 1 523 1 PC PC . H 3 NA A 1 524 1 NA NA . I 8 HOH A 1 525 1 HOH HOH . I 8 HOH A 2 526 2 HOH HOH . I 8 HOH A 3 527 3 HOH HOH . I 8 HOH A 4 528 4 HOH HOH . I 8 HOH A 5 529 5 HOH HOH . I 8 HOH A 6 530 7 HOH HOH . I 8 HOH A 7 531 8 HOH HOH . I 8 HOH A 8 532 9 HOH HOH . I 8 HOH A 9 533 10 HOH HOH . I 8 HOH A 10 534 11 HOH HOH . I 8 HOH A 11 535 12 HOH HOH . I 8 HOH A 12 536 13 HOH HOH . I 8 HOH A 13 537 14 HOH HOH . I 8 HOH A 14 538 15 HOH HOH . I 8 HOH A 15 539 16 HOH HOH . I 8 HOH A 16 540 17 HOH HOH . I 8 HOH A 17 541 18 HOH HOH . I 8 HOH A 18 542 19 HOH HOH . I 8 HOH A 19 543 20 HOH HOH . I 8 HOH A 20 544 21 HOH HOH . I 8 HOH A 21 545 22 HOH HOH . I 8 HOH A 22 546 23 HOH HOH . I 8 HOH A 23 547 24 HOH HOH . I 8 HOH A 24 548 25 HOH HOH . I 8 HOH A 25 549 26 HOH HOH . I 8 HOH A 26 550 27 HOH HOH . I 8 HOH A 27 551 30 HOH HOH . I 8 HOH A 28 552 31 HOH HOH . I 8 HOH A 29 553 34 HOH HOH . I 8 HOH A 30 554 35 HOH HOH . I 8 HOH A 31 555 39 HOH HOH . I 8 HOH A 32 556 41 HOH HOH . I 8 HOH A 33 557 44 HOH HOH . I 8 HOH A 34 558 47 HOH HOH . I 8 HOH A 35 559 48 HOH HOH . I 8 HOH A 36 560 50 HOH HOH . I 8 HOH A 37 561 53 HOH HOH . I 8 HOH A 38 562 56 HOH HOH . I 8 HOH A 39 563 57 HOH HOH . I 8 HOH A 40 564 58 HOH HOH . I 8 HOH A 41 565 59 HOH HOH . I 8 HOH A 42 566 60 HOH HOH . I 8 HOH A 43 567 61 HOH HOH . I 8 HOH A 44 568 63 HOH HOH . I 8 HOH A 45 569 64 HOH HOH . I 8 HOH A 46 570 65 HOH HOH . I 8 HOH A 47 571 66 HOH HOH . I 8 HOH A 48 572 67 HOH HOH . I 8 HOH A 49 573 68 HOH HOH . I 8 HOH A 50 574 69 HOH HOH . I 8 HOH A 51 575 70 HOH HOH . I 8 HOH A 52 576 71 HOH HOH . I 8 HOH A 53 577 72 HOH HOH . I 8 HOH A 54 578 74 HOH HOH . I 8 HOH A 55 579 75 HOH HOH . I 8 HOH A 56 580 76 HOH HOH . I 8 HOH A 57 581 77 HOH HOH . I 8 HOH A 58 582 78 HOH HOH . I 8 HOH A 59 583 79 HOH HOH . I 8 HOH A 60 584 80 HOH HOH . I 8 HOH A 61 585 81 HOH HOH . I 8 HOH A 62 586 82 HOH HOH . I 8 HOH A 63 587 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UND . . . F 6 52.556 5.022 -0.01 1 54.97 ? C2 UND 522 A 1 HETATM 2 C C3 UND . . . F 6 51.884 3.805 -0.555 1 64 ? C3 UND 522 A 1 HETATM 3 C C4 UND . . . F 6 52.723 2.585 -0.737 1 62.78 ? C4 UND 522 A 1 HETATM 4 C C5 UND . . . F 6 52.056 1.378 -1.297 1 60.65 ? C5 UND 522 A 1 HETATM 5 C C6 UND . . . F 6 52.865 0.136 -1.411 1 61.66 ? C6 UND 522 A 1 HETATM 6 C C7 UND . . . F 6 52.147 -1.128 -1.71 1 63.47 ? C7 UND 522 A 1 HETATM 7 C C8 UND . . . F 6 52.948 -2.377 -1.778 1 59.44 ? C8 UND 522 A 1 HETATM 8 C C9 UND . . . F 6 52.217 -3.655 -2 1 60.19 ? C9 UND 522 A 1 HETATM 9 C C10 UND . . . F 6 53.033 -4.903 -2.067 1 63.91 ? C10 UND 522 A 1 HETATM 10 C C11 UND . . . F 6 52.298 -6.197 -2.177 1 57.2 ? C11 UND 522 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #