data_3USJ # _model_server_result.job_id CEQpkj2BS61LJRz0aJtGMA _model_server_result.datetime_utc '2024-11-21 13:42:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 3USJ # _exptl.entry_id 3USJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description LEUCINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 89.96 _cell.angle_gamma 90 _cell.entry_id 3USJ _cell.length_a 57.307 _cell.length_b 179.88 _cell.length_c 57.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F,G,H 2 1 A,C,D,E 3 1 B,F,G,H 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_546 -x,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 0.039938 -89.94 57.206986 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 D NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 D NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc5 A O THR 254 A THR 254 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc6 A OG1 THR 254 A THR 254 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 D NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 D NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 D NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc11 C O LEU . A LEU 601 1_555 E NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc12 B O GLY 20 B GLY 20 1_555 G NA NA . B NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc13 B O ALA 22 B ALA 22 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc14 B O VAL 23 B VAL 23 1_555 G NA NA . B NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc15 B OD1 ASN 27 B ASN 27 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc16 B O THR 254 B THR 254 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc17 B OG1 THR 254 B THR 254 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc18 B OD1 ASN 286 B ASN 286 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc19 B O ALA 351 B ALA 351 1_555 G NA NA . B NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc20 B OG1 THR 354 B THR 354 1_555 G NA NA . B NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc21 B OG SER 355 B SER 355 1_555 G NA NA . B NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc22 F O LEU . B LEU 601 1_555 H NA NA . B NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? # _chem_comp.formula 'C6 H13 N O2' _chem_comp.formula_weight 131.173 _chem_comp.id LEU _chem_comp.mon_nstd_flag y _chem_comp.name LEUCINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA LEU sing 158 n n N H LEU sing 159 n n N H2 LEU sing 160 n n CA C LEU sing 161 n n CA CB LEU sing 162 n n CA HA LEU sing 163 n n C O LEU doub 164 n n C OXT LEU sing 165 n n CB CG LEU sing 166 n n CB HB2 LEU sing 167 n n CB HB3 LEU sing 168 n n CG CD1 LEU sing 169 n n CG CD2 LEU sing 170 n n CG HG LEU sing 171 n n CD1 HD11 LEU sing 172 n n CD1 HD12 LEU sing 173 n n CD1 HD13 LEU sing 174 n n CD2 HD21 LEU sing 175 n n CD2 HD22 LEU sing 176 n n CD2 HD23 LEU sing 177 n n OXT HXT LEU sing 178 n n # _atom_sites.entry_id 3USJ _atom_sites.fract_transf_matrix[1][1] 0.01745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] -0.000012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LEU A 1 601 601 LEU LEU . D 3 NA A 1 751 751 NA NA . E 3 NA A 1 752 752 NA NA . F 2 LEU B 1 601 601 LEU LEU . G 3 NA B 1 751 751 NA NA . H 3 NA B 1 752 752 NA NA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N LEU . . . F 2 3.988 15.683 31.277 1 77.15 ? N LEU 601 B 1 HETATM 2 C CA LEU . . . F 2 2.778 16.07 30.562 1 81.44 ? CA LEU 601 B 1 HETATM 3 C C LEU . . . F 2 2.59 15.232 29.304 1 84.4 ? C LEU 601 B 1 HETATM 4 O O LEU . . . F 2 3.358 14.308 29.028 1 83.49 ? O LEU 601 B 1 HETATM 5 C CB LEU . . . F 2 2.823 17.552 30.187 1 84.12 ? CB LEU 601 B 1 HETATM 6 C CG LEU . . . F 2 3.023 18.54 31.337 1 82.78 ? CG LEU 601 B 1 HETATM 7 C CD1 LEU . . . F 2 3 19.966 30.811 1 84.59 ? CD1 LEU 601 B 1 HETATM 8 C CD2 LEU . . . F 2 1.966 18.344 32.412 1 72.07 ? CD2 LEU 601 B 1 HETATM 9 O OXT LEU . . . F 2 1.659 15.466 28.534 1 85.77 ? OXT LEU 601 B 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 9 #