data_3USL # _model_server_result.job_id J4L4abjwg1lAxOuw8HVABw _model_server_result.datetime_utc '2024-10-14 05:21:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":521}' # _entry.id 3USL # _exptl.entry_id 3USL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.151 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.88 _cell.angle_gamma 90 _cell.entry_id 3USL _cell.length_a 122.323 _cell.length_b 90.062 _cell.length_c 81.968 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.659763 0 79.574557 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc5 A O THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc6 A OG1 THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc11 D OXT MSE . A MSE 601 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? # _chem_comp.formula 'C5 H15 N O4 P 1' _chem_comp.formula_weight 184.151 _chem_comp.id PC _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 PC doub 249 n n P1 O3 PC sing 250 n n P1 O4 PC sing 251 n n P1 O2 PC sing 252 n n O3 HO3 PC sing 253 n n O4 HO4 PC sing 254 n n O2 C1 PC sing 255 n n C1 C2 PC sing 256 n n C1 H11 PC sing 257 n n C1 H12 PC sing 258 n n C2 N1 PC sing 259 n n C2 H21 PC sing 260 n n C2 H22 PC sing 261 n n N1 C3 PC sing 262 n n N1 C4 PC sing 263 n n N1 C5 PC sing 264 n n C3 H31 PC sing 265 n n C3 H32 PC sing 266 n n C3 H33 PC sing 267 n n C4 H41 PC sing 268 n n C4 H42 PC sing 269 n n C4 H43 PC sing 270 n n C5 H51 PC sing 271 n n C5 H52 PC sing 272 n n C5 H53 PC sing 273 n n # _atom_sites.entry_id 3USL _atom_sites.fract_transf_matrix[1][1] 0.008175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00202 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 751 751 NA NA . C 2 NA A 1 752 752 NA NA . D 3 MSE A 1 601 601 MSE MSE . E 4 ACT A 1 520 1 ACT ACT . F 5 PC A 1 521 1 PC PC . G 6 IOD A 1 522 1 IOD IOD . H 7 HOH A 1 523 1 HOH HOH . H 7 HOH A 2 524 3 HOH HOH . H 7 HOH A 3 525 5 HOH HOH . H 7 HOH A 4 526 6 HOH HOH . H 7 HOH A 5 527 7 HOH HOH . H 7 HOH A 6 528 8 HOH HOH . H 7 HOH A 7 529 9 HOH HOH . H 7 HOH A 8 530 10 HOH HOH . H 7 HOH A 9 531 14 HOH HOH . H 7 HOH A 10 532 15 HOH HOH . H 7 HOH A 11 533 16 HOH HOH . H 7 HOH A 12 534 17 HOH HOH . H 7 HOH A 13 535 18 HOH HOH . H 7 HOH A 14 536 19 HOH HOH . H 7 HOH A 15 537 21 HOH HOH . H 7 HOH A 16 538 22 HOH HOH . H 7 HOH A 17 539 23 HOH HOH . H 7 HOH A 18 540 24 HOH HOH . H 7 HOH A 19 541 25 HOH HOH . H 7 HOH A 20 542 30 HOH HOH . H 7 HOH A 21 543 31 HOH HOH . H 7 HOH A 22 544 32 HOH HOH . H 7 HOH A 23 545 33 HOH HOH . H 7 HOH A 24 546 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 PC . . . F 5 31.015 11.446 44.236 1 112.06 ? P1 PC 521 A 1 HETATM 2 O O1 PC . . . F 5 29.582 11.929 44.191 1 107.62 ? O1 PC 521 A 1 HETATM 3 O O3 PC . . . F 5 31.542 11.305 42.825 1 105.78 ? O3 PC 521 A 1 HETATM 4 O O4 PC . . . F 5 31.874 12.408 45.021 1 97.59 ? O4 PC 521 A 1 HETATM 5 O O2 PC . . . F 5 31.078 10.053 44.961 1 97.11 ? O2 PC 521 A 1 HETATM 6 C C1 PC . . . F 5 30.267 9.012 44.538 1 95.71 ? C1 PC 521 A 1 HETATM 7 C C2 PC . . . F 5 30.541 7.679 45.168 1 100.64 ? C2 PC 521 A 1 HETATM 8 N N1 PC . . . F 5 29.634 6.563 44.867 1 99.79 ? N1 PC 521 A 1 HETATM 9 C C3 PC . . . F 5 29.957 5.407 45.702 1 93.85 ? C3 PC 521 A 1 HETATM 10 C C4 PC . . . F 5 29.736 6.203 43.46 1 97.46 ? C4 PC 521 A 1 HETATM 11 C C5 PC . . . F 5 28.264 6.981 45.129 1 98.84 ? C5 PC 521 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 663 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 11 #