data_3USL # _model_server_result.job_id SAOZFBXSTvGVMgKe9TX6_A _model_server_result.datetime_utc '2024-11-27 00:52:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 3USL # _exptl.entry_id 3USL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.106 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SELENOMETHIONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.88 _cell.angle_gamma 90 _cell.entry_id 3USL _cell.length_a 122.323 _cell.length_b 90.062 _cell.length_c 81.968 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.659763 0 79.574557 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc5 A O THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc6 A OG1 THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc11 D OXT MSE . A MSE 601 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? # _chem_comp.formula 'C5 H11 N O2 Se' _chem_comp.formula_weight 196.106 _chem_comp.id MSE _chem_comp.mon_nstd_flag n _chem_comp.name SELENOMETHIONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA MSE sing 230 n n N H MSE sing 231 n n N H2 MSE sing 232 n n CA C MSE sing 233 n n CA CB MSE sing 234 n n CA HA MSE sing 235 n n C O MSE doub 236 n n C OXT MSE sing 237 n n OXT HXT MSE sing 238 n n CB CG MSE sing 239 n n CB HB2 MSE sing 240 n n CB HB3 MSE sing 241 n n CG SE MSE sing 242 n n CG HG2 MSE sing 243 n n CG HG3 MSE sing 244 n n SE CE MSE sing 245 n n CE HE1 MSE sing 246 n n CE HE2 MSE sing 247 n n CE HE3 MSE sing 248 n n # _atom_sites.entry_id 3USL _atom_sites.fract_transf_matrix[1][1] 0.008175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00202 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 751 751 NA NA . C 2 NA A 1 752 752 NA NA . D 3 MSE A 1 601 601 MSE MSE . E 4 ACT A 1 520 1 ACT ACT . F 5 PC A 1 521 1 PC PC . G 6 IOD A 1 522 1 IOD IOD . H 7 HOH A 1 523 1 HOH HOH . H 7 HOH A 2 524 3 HOH HOH . H 7 HOH A 3 525 5 HOH HOH . H 7 HOH A 4 526 6 HOH HOH . H 7 HOH A 5 527 7 HOH HOH . H 7 HOH A 6 528 8 HOH HOH . H 7 HOH A 7 529 9 HOH HOH . H 7 HOH A 8 530 10 HOH HOH . H 7 HOH A 9 531 14 HOH HOH . H 7 HOH A 10 532 15 HOH HOH . H 7 HOH A 11 533 16 HOH HOH . H 7 HOH A 12 534 17 HOH HOH . H 7 HOH A 13 535 18 HOH HOH . H 7 HOH A 14 536 19 HOH HOH . H 7 HOH A 15 537 21 HOH HOH . H 7 HOH A 16 538 22 HOH HOH . H 7 HOH A 17 539 23 HOH HOH . H 7 HOH A 18 540 24 HOH HOH . H 7 HOH A 19 541 25 HOH HOH . H 7 HOH A 20 542 30 HOH HOH . H 7 HOH A 21 543 31 HOH HOH . H 7 HOH A 22 544 32 HOH HOH . H 7 HOH A 23 545 33 HOH HOH . H 7 HOH A 24 546 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N MSE . . . D 3 39.445 -6.115 16.157 1 45.78 ? N MSE 601 A 1 HETATM 2 C CA MSE . . . D 3 40.609 -6.911 16.531 1 44.57 ? CA MSE 601 A 1 HETATM 3 C C MSE . . . D 3 40.726 -8.159 15.665 1 49.03 ? C MSE 601 A 1 HETATM 4 O O MSE . . . D 3 41.802 -8.74 15.533 1 54.4 ? O MSE 601 A 1 HETATM 5 O OXT MSE . . . D 3 39.747 -8.619 15.079 1 47.27 ? OXT MSE 601 A 1 HETATM 6 C CB MSE . . . D 3 40.535 -7.305 18.007 1 44.48 ? CB MSE 601 A 1 HETATM 7 C CG MSE . . . D 3 40.514 -6.125 18.962 1 46.5 ? CG MSE 601 A 1 HETATM 8 SE SE MSE . . . D 3 42.06 -4.957 18.737 1 68 ? SE MSE 601 A 1 HETATM 9 C CE MSE . . . D 3 43.481 -6.228 19.135 1 46.87 ? CE MSE 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #