data_3USM # _model_server_result.job_id dznQCfCjXrPWKNu8xmk5Zg _model_server_result.datetime_utc '2024-11-28 11:12:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":520}' # _entry.id 3USM # _exptl.entry_id 3USM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.151 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.62 _cell.angle_gamma 90 _cell.entry_id 3USM _cell.length_a 122.254 _cell.length_b 90.396 _cell.length_c 82.164 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.905908 0 79.853455 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc5 A O THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc6 A OG1 THR 254 A THR 254 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 B NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc11 D OXT MSE . A MSE 601 1_555 C NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? # _chem_comp.formula 'C5 H15 N O4 P 1' _chem_comp.formula_weight 184.151 _chem_comp.id PC _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 PC doub 243 n n P1 O3 PC sing 244 n n P1 O4 PC sing 245 n n P1 O2 PC sing 246 n n O3 HO3 PC sing 247 n n O4 HO4 PC sing 248 n n O2 C1 PC sing 249 n n C1 C2 PC sing 250 n n C1 H11 PC sing 251 n n C1 H12 PC sing 252 n n C2 N1 PC sing 253 n n C2 H21 PC sing 254 n n C2 H22 PC sing 255 n n N1 C3 PC sing 256 n n N1 C4 PC sing 257 n n N1 C5 PC sing 258 n n C3 H31 PC sing 259 n n C3 H32 PC sing 260 n n C3 H33 PC sing 261 n n C4 H41 PC sing 262 n n C4 H42 PC sing 263 n n C4 H43 PC sing 264 n n C5 H51 PC sing 265 n n C5 H52 PC sing 266 n n C5 H53 PC sing 267 n n # _atom_sites.entry_id 3USM _atom_sites.fract_transf_matrix[1][1] 0.00818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001982 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012523 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 751 751 NA NA . C 2 NA A 1 752 752 NA NA . D 3 MSE A 1 601 601 MSE MSE . E 4 PC A 1 520 1 PC PC . F 5 IOD A 1 521 1 IOD IOD . G 6 HOH A 1 522 1 HOH HOH . G 6 HOH A 2 523 2 HOH HOH . G 6 HOH A 3 524 3 HOH HOH . G 6 HOH A 4 525 5 HOH HOH . G 6 HOH A 5 526 6 HOH HOH . G 6 HOH A 6 527 7 HOH HOH . G 6 HOH A 7 528 8 HOH HOH . G 6 HOH A 8 529 9 HOH HOH . G 6 HOH A 9 530 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 PC . . . E 4 31.453 10.171 44.99 1 149.95 ? P1 PC 520 A 1 HETATM 2 O O1 PC . . . E 4 30.792 10.713 46.227 1 147.27 ? O1 PC 520 A 1 HETATM 3 O O3 PC . . . E 4 30.604 10.405 43.76 1 116.17 ? O3 PC 520 A 1 HETATM 4 O O4 PC . . . E 4 32.783 10.848 44.814 1 134.39 ? O4 PC 520 A 1 HETATM 5 O O2 PC . . . E 4 31.754 8.649 45.277 1 138.34 ? O2 PC 520 A 1 HETATM 6 C C1 PC . . . E 4 30.764 7.67 45.266 1 129.63 ? C1 PC 520 A 1 HETATM 7 C C2 PC . . . E 4 31.186 6.232 45.193 1 125.82 ? C2 PC 520 A 1 HETATM 8 N N1 PC . . . E 4 30.15 5.244 45.513 1 130.34 ? N1 PC 520 A 1 HETATM 9 C C3 PC . . . E 4 30.599 3.876 45.269 1 117.13 ? C3 PC 520 A 1 HETATM 10 C C4 PC . . . E 4 28.971 5.517 44.701 1 111.02 ? C4 PC 520 A 1 HETATM 11 C C5 PC . . . E 4 29.797 5.369 46.922 1 133.61 ? C5 PC 520 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 11 #