data_3USR # _model_server_result.job_id yg0sAOcAaLFXUPMnn0mIiw _model_server_result.datetime_utc '2025-09-09 02:25:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3usr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":271}' # _entry.id 3USR # _exptl.entry_id 3USR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3USR _cell.length_a 58.28 _cell.length_b 103.37 _cell.length_c 119.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3USR _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2 A,B,C,D,E 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -103.37 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 119.63 4 'crystal symmetry operation' 4_546 x,-y-1,-z+1 1 0 0 0 -1 0 0 0 -1 0 -103.37 119.63 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3USR _atom_sites.fract_transf_matrix[1][1] 0.017159 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 271 266 GOL GOL . C 2 GOL A 1 272 267 GOL GOL . D 3 CL A 1 273 268 CL CL . E 4 HOH A 1 274 274 HOH HOH . E 4 HOH A 2 275 275 HOH HOH . E 4 HOH A 3 276 276 HOH HOH . E 4 HOH A 4 277 277 HOH HOH . E 4 HOH A 5 278 278 HOH HOH . E 4 HOH A 6 279 279 HOH HOH . E 4 HOH A 7 280 280 HOH HOH . E 4 HOH A 8 281 281 HOH HOH . E 4 HOH A 9 282 282 HOH HOH . E 4 HOH A 10 283 283 HOH HOH . E 4 HOH A 11 284 284 HOH HOH . E 4 HOH A 12 285 285 HOH HOH . E 4 HOH A 13 286 286 HOH HOH . E 4 HOH A 14 287 287 HOH HOH . E 4 HOH A 15 288 288 HOH HOH . E 4 HOH A 16 289 289 HOH HOH . E 4 HOH A 17 290 290 HOH HOH . E 4 HOH A 18 291 291 HOH HOH . E 4 HOH A 19 292 292 HOH HOH . E 4 HOH A 20 293 293 HOH HOH . E 4 HOH A 21 294 294 HOH HOH . E 4 HOH A 22 295 295 HOH HOH . E 4 HOH A 23 296 296 HOH HOH . E 4 HOH A 24 297 297 HOH HOH . E 4 HOH A 25 298 298 HOH HOH . E 4 HOH A 26 299 299 HOH HOH . E 4 HOH A 27 300 300 HOH HOH . E 4 HOH A 28 301 301 HOH HOH . E 4 HOH A 29 302 302 HOH HOH . E 4 HOH A 30 303 303 HOH HOH . E 4 HOH A 31 304 304 HOH HOH . E 4 HOH A 32 305 305 HOH HOH . E 4 HOH A 33 306 306 HOH HOH . E 4 HOH A 34 307 307 HOH HOH . E 4 HOH A 35 308 308 HOH HOH . E 4 HOH A 36 309 309 HOH HOH . E 4 HOH A 37 310 310 HOH HOH . E 4 HOH A 38 311 311 HOH HOH . E 4 HOH A 39 312 312 HOH HOH . E 4 HOH A 40 313 313 HOH HOH . E 4 HOH A 41 314 314 HOH HOH . E 4 HOH A 42 315 315 HOH HOH . E 4 HOH A 43 316 316 HOH HOH . E 4 HOH A 44 317 317 HOH HOH . E 4 HOH A 45 318 318 HOH HOH . E 4 HOH A 46 319 319 HOH HOH . E 4 HOH A 47 320 320 HOH HOH . E 4 HOH A 48 321 321 HOH HOH . E 4 HOH A 49 322 322 HOH HOH . E 4 HOH A 50 323 323 HOH HOH . E 4 HOH A 51 324 324 HOH HOH . E 4 HOH A 52 325 325 HOH HOH . E 4 HOH A 53 326 326 HOH HOH . E 4 HOH A 54 327 327 HOH HOH . E 4 HOH A 55 328 328 HOH HOH . E 4 HOH A 56 329 329 HOH HOH . E 4 HOH A 57 330 330 HOH HOH . E 4 HOH A 58 331 331 HOH HOH . E 4 HOH A 59 332 332 HOH HOH . E 4 HOH A 60 333 333 HOH HOH . E 4 HOH A 61 334 334 HOH HOH . E 4 HOH A 62 335 335 HOH HOH . E 4 HOH A 63 336 336 HOH HOH . E 4 HOH A 64 337 337 HOH HOH . E 4 HOH A 65 338 338 HOH HOH . E 4 HOH A 66 339 339 HOH HOH . E 4 HOH A 67 340 340 HOH HOH . E 4 HOH A 68 341 341 HOH HOH . E 4 HOH A 69 342 342 HOH HOH . E 4 HOH A 70 343 343 HOH HOH . E 4 HOH A 71 344 344 HOH HOH . E 4 HOH A 72 345 345 HOH HOH . E 4 HOH A 73 346 346 HOH HOH . E 4 HOH A 74 347 347 HOH HOH . E 4 HOH A 75 348 348 HOH HOH . E 4 HOH A 76 349 349 HOH HOH . E 4 HOH A 77 350 350 HOH HOH . E 4 HOH A 78 351 351 HOH HOH . E 4 HOH A 79 352 352 HOH HOH . E 4 HOH A 80 353 353 HOH HOH . E 4 HOH A 81 354 354 HOH HOH . E 4 HOH A 82 355 355 HOH HOH . E 4 HOH A 83 356 356 HOH HOH . E 4 HOH A 84 357 357 HOH HOH . E 4 HOH A 85 358 358 HOH HOH . E 4 HOH A 86 359 359 HOH HOH . E 4 HOH A 87 360 360 HOH HOH . E 4 HOH A 88 361 361 HOH HOH . E 4 HOH A 89 362 362 HOH HOH . E 4 HOH A 90 363 363 HOH HOH . E 4 HOH A 91 364 364 HOH HOH . E 4 HOH A 92 365 365 HOH HOH . E 4 HOH A 93 366 366 HOH HOH . E 4 HOH A 94 367 367 HOH HOH . E 4 HOH A 95 368 368 HOH HOH . E 4 HOH A 96 369 369 HOH HOH . E 4 HOH A 97 370 370 HOH HOH . E 4 HOH A 98 371 371 HOH HOH . E 4 HOH A 99 372 372 HOH HOH . E 4 HOH A 100 373 373 HOH HOH . E 4 HOH A 101 374 374 HOH HOH . E 4 HOH A 102 375 375 HOH HOH . E 4 HOH A 103 376 376 HOH HOH . E 4 HOH A 104 377 377 HOH HOH . E 4 HOH A 105 378 378 HOH HOH . E 4 HOH A 106 379 379 HOH HOH . E 4 HOH A 107 380 380 HOH HOH . E 4 HOH A 108 381 381 HOH HOH . E 4 HOH A 109 382 382 HOH HOH . E 4 HOH A 110 383 383 HOH HOH . E 4 HOH A 111 384 384 HOH HOH . E 4 HOH A 112 385 385 HOH HOH . E 4 HOH A 113 386 386 HOH HOH . E 4 HOH A 114 387 387 HOH HOH . E 4 HOH A 115 388 388 HOH HOH . E 4 HOH A 116 389 389 HOH HOH . E 4 HOH A 117 390 271 HOH HOH . E 4 HOH A 118 391 272 HOH HOH . E 4 HOH A 119 392 273 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -8.514 -44.418 72.281 1 40.08 ? C1 GOL 271 A 1 HETATM 2 O O1 GOL . . . B 2 -8.657 -45.721 72.823 1 39.18 ? O1 GOL 271 A 1 HETATM 3 C C2 GOL . . . B 2 -7.217 -43.837 72.828 1 39.88 ? C2 GOL 271 A 1 HETATM 4 O O2 GOL . . . B 2 -6.794 -44.665 73.88 1 40.77 ? O2 GOL 271 A 1 HETATM 5 C C3 GOL . . . B 2 -7.366 -42.417 73.358 1 38.46 ? C3 GOL 271 A 1 HETATM 6 O O3 GOL . . . B 2 -7.606 -41.492 72.328 1 35.73 ? O3 GOL 271 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #