data_3UU5 # _model_server_result.job_id WjRfMDJmDTwvodycSgBeeA _model_server_result.datetime_utc '2024-11-24 11:26:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":320}' # _entry.id 3UU5 # _exptl.entry_id 3UU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 622.834 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIUNDECYL PHOSPHATIDYL CHOLINE' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.42 _cell.angle_gamma 90 _cell.entry_id 3UU5 _cell.length_a 181.86 _cell.length_b 132.98 _cell.length_c 160.42 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 M N N ? 2 N N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 BA N N ? 2 CA N N # _chem_comp.formula 'C32 H65 N O8 P 1' _chem_comp.formula_weight 622.834 _chem_comp.id PLC _chem_comp.mon_nstd_flag . _chem_comp.name 'DIUNDECYL PHOSPHATIDYL CHOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PLC sing 342 n n C1 O3P PLC sing 343 n n C1 H11 PLC sing 344 n n C1 H12 PLC sing 345 n n C2 C3 PLC sing 346 n n C2 O2 PLC sing 347 n n C2 H2 PLC sing 348 n n C3 O3 PLC sing 349 n n C3 H31 PLC sing 350 n n C3 H32 PLC sing 351 n n C4 C5 PLC sing 352 n n C4 O4P PLC sing 353 n n C4 H41 PLC sing 354 n n C4 H42 PLC sing 355 n n C5 N PLC sing 356 n n C5 H51 PLC sing 357 n n C5 H52 PLC sing 358 n n C6 N PLC sing 359 n n C6 H61 PLC sing 360 n n C6 H62 PLC sing 361 n n C6 H63 PLC sing 362 n n C7 N PLC sing 363 n n C7 H71 PLC sing 364 n n C7 H72 PLC sing 365 n n C7 H73 PLC sing 366 n n C8 N PLC sing 367 n n C8 H81 PLC sing 368 n n C8 H82 PLC sing 369 n n C8 H83 PLC sing 370 n n C' C1' PLC sing 371 n n C' O' PLC doub 372 n n C' O2 PLC sing 373 n n C1' C2' PLC sing 374 n n C1' "H1'1" PLC sing 375 n n C1' "H1'2" PLC sing 376 n n C2' C3' PLC sing 377 n n C2' "H2'1" PLC sing 378 n n C2' "H2'2" PLC sing 379 n n C3' C4' PLC sing 380 n n C3' "H3'1" PLC sing 381 n n C3' "H3'2" PLC sing 382 n n C4' C5' PLC sing 383 n n C4' "H4'1" PLC sing 384 n n C4' "H4'2" PLC sing 385 n n C5' C6' PLC sing 386 n n C5' "H5'1" PLC sing 387 n n C5' "H5'2" PLC sing 388 n n C6' C7' PLC sing 389 n n C6' "H6'1" PLC sing 390 n n C6' "H6'2" PLC sing 391 n n C7' C8' PLC sing 392 n n C7' "H7'1" PLC sing 393 n n C7' "H7'2" PLC sing 394 n n C8' C9' PLC sing 395 n n C8' "H8'1" PLC sing 396 n n C8' "H8'2" PLC sing 397 n n C9' CA' PLC sing 398 n n C9' "H9'1" PLC sing 399 n n C9' "H9'2" PLC sing 400 n n CA' CB' PLC sing 401 n n CA' "HT'1" PLC sing 402 n n CA' "HT'2" PLC sing 403 n n CB' "HE'1" PLC sing 404 n n CB' "HE'2" PLC sing 405 n n CB' "HE'3" PLC sing 406 n n CB C1B PLC sing 407 n n CB OB PLC doub 408 n n CB O3 PLC sing 409 n n C1B C2B PLC sing 410 n n C1B H1A1 PLC sing 411 n n C1B H1A2 PLC sing 412 n n C2B C3B PLC sing 413 n n C2B H2A1 PLC sing 414 n n C2B H2A2 PLC sing 415 n n C3B C4B PLC sing 416 n n C3B H3A1 PLC sing 417 n n C3B H3A2 PLC sing 418 n n C4B C5B PLC sing 419 n n C4B H4A1 PLC sing 420 n n C4B H4A2 PLC sing 421 n n C5B C6B PLC sing 422 n n C5B H5A1 PLC sing 423 n n C5B H5A2 PLC sing 424 n n C6B C7B PLC sing 425 n n C6B H6A1 PLC sing 426 n n C6B H6A2 PLC sing 427 n n C7B C8B PLC sing 428 n n C7B H7A1 PLC sing 429 n n C7B H7A2 PLC sing 430 n n C8B C9B PLC sing 431 n n C8B H8A1 PLC sing 432 n n C8B H8A2 PLC sing 433 n n C9B CAA PLC sing 434 n n C9B H9A1 PLC sing 435 n n C9B H9A2 PLC sing 436 n n CAA CBA PLC sing 437 n n CAA HTA1 PLC sing 438 n n CAA HTA2 PLC sing 439 n n CBA HEA1 PLC sing 440 n n CBA HEA2 PLC sing 441 n n CBA HEA3 PLC sing 442 n n O1P P PLC doub 443 n n O2P P PLC sing 444 n n O2P HOP2 PLC sing 445 n n O3P P PLC sing 446 n n O4P P PLC sing 447 n n # _atom_sites.entry_id 3UU5 _atom_sites.fract_transf_matrix[1][1] 0.005499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001211 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PLC A 1 318 1 PLC PLC . G 2 PLC A 1 319 2 PLC PLC . H 2 PLC A 1 320 11 PLC PLC . I 2 PLC A 1 321 12 PLC PLC . J 3 CL A 1 322 3 CL CL . K 4 LMT A 1 323 5 LMT LMT . L 5 NA A 1 324 1 NA NA . M 2 PLC B 1 318 3 PLC PLC . N 2 PLC B 1 319 4 PLC PLC . O 3 CL B 1 320 4 CL CL . P 4 LMT B 1 321 4 LMT LMT . Q 4 LMT B 1 322 6 LMT LMT . R 2 PLC C 1 318 5 PLC PLC . S 2 PLC C 1 319 6 PLC PLC . T 2 PLC C 1 320 13 PLC PLC . U 3 CL C 1 321 5 CL CL . V 4 LMT C 1 322 3 LMT LMT . W 2 PLC D 1 318 7 PLC PLC . X 2 PLC D 1 319 8 PLC PLC . Y 2 PLC D 1 320 14 PLC PLC . Z 3 CL D 1 321 1 CL CL . AA 4 LMT D 1 322 2 LMT LMT . BA 2 PLC E 1 318 9 PLC PLC . CA 2 PLC E 1 319 10 PLC PLC . DA 3 CL E 1 320 2 CL CL . EA 4 LMT E 1 321 1 LMT LMT . FA 6 HOH A 1 325 8 HOH HOH . FA 6 HOH A 2 326 13 HOH HOH . FA 6 HOH A 3 327 14 HOH HOH . FA 6 HOH A 4 328 15 HOH HOH . FA 6 HOH A 5 329 16 HOH HOH . FA 6 HOH A 6 330 18 HOH HOH . FA 6 HOH A 7 331 23 HOH HOH . FA 6 HOH A 8 332 33 HOH HOH . FA 6 HOH A 9 333 35 HOH HOH . FA 6 HOH A 10 334 42 HOH HOH . FA 6 HOH A 11 335 46 HOH HOH . FA 6 HOH A 12 336 60 HOH HOH . FA 6 HOH A 13 337 61 HOH HOH . FA 6 HOH A 14 338 62 HOH HOH . FA 6 HOH A 15 339 77 HOH HOH . FA 6 HOH A 16 340 87 HOH HOH . FA 6 HOH A 17 341 91 HOH HOH . FA 6 HOH A 18 342 92 HOH HOH . FA 6 HOH A 19 343 95 HOH HOH . FA 6 HOH A 20 344 96 HOH HOH . FA 6 HOH A 21 345 106 HOH HOH . FA 6 HOH A 22 346 107 HOH HOH . FA 6 HOH A 23 347 115 HOH HOH . FA 6 HOH A 24 348 117 HOH HOH . FA 6 HOH A 25 349 122 HOH HOH . FA 6 HOH A 26 350 128 HOH HOH . FA 6 HOH A 27 351 134 HOH HOH . FA 6 HOH A 28 352 144 HOH HOH . FA 6 HOH A 29 353 150 HOH HOH . GA 6 HOH B 1 323 12 HOH HOH . GA 6 HOH B 2 324 31 HOH HOH . GA 6 HOH B 3 325 37 HOH HOH . GA 6 HOH B 4 326 38 HOH HOH . GA 6 HOH B 5 327 39 HOH HOH . GA 6 HOH B 6 328 40 HOH HOH . GA 6 HOH B 7 329 53 HOH HOH . GA 6 HOH B 8 330 54 HOH HOH . GA 6 HOH B 9 331 55 HOH HOH . GA 6 HOH B 10 332 56 HOH HOH . GA 6 HOH B 11 333 57 HOH HOH . GA 6 HOH B 12 334 58 HOH HOH . GA 6 HOH B 13 335 59 HOH HOH . GA 6 HOH B 14 336 63 HOH HOH . GA 6 HOH B 15 337 64 HOH HOH . GA 6 HOH B 16 338 65 HOH HOH . GA 6 HOH B 17 339 66 HOH HOH . GA 6 HOH B 18 340 67 HOH HOH . GA 6 HOH B 19 341 68 HOH HOH . GA 6 HOH B 20 342 83 HOH HOH . GA 6 HOH B 21 343 84 HOH HOH . GA 6 HOH B 22 344 86 HOH HOH . GA 6 HOH B 23 345 88 HOH HOH . GA 6 HOH B 24 346 89 HOH HOH . GA 6 HOH B 25 347 118 HOH HOH . GA 6 HOH B 26 348 123 HOH HOH . GA 6 HOH B 27 349 125 HOH HOH . GA 6 HOH B 28 350 129 HOH HOH . GA 6 HOH B 29 351 130 HOH HOH . GA 6 HOH B 30 352 131 HOH HOH . GA 6 HOH B 31 353 146 HOH HOH . HA 6 HOH C 1 323 21 HOH HOH . HA 6 HOH C 2 324 34 HOH HOH . HA 6 HOH C 3 325 36 HOH HOH . HA 6 HOH C 4 326 50 HOH HOH . HA 6 HOH C 5 327 52 HOH HOH . HA 6 HOH C 6 328 69 HOH HOH . HA 6 HOH C 7 329 70 HOH HOH . HA 6 HOH C 8 330 71 HOH HOH . HA 6 HOH C 9 331 72 HOH HOH . HA 6 HOH C 10 332 73 HOH HOH . HA 6 HOH C 11 333 74 HOH HOH . HA 6 HOH C 12 334 75 HOH HOH . HA 6 HOH C 13 335 76 HOH HOH . HA 6 HOH C 14 336 85 HOH HOH . HA 6 HOH C 15 337 93 HOH HOH . HA 6 HOH C 16 338 97 HOH HOH . HA 6 HOH C 17 339 98 HOH HOH . HA 6 HOH C 18 340 99 HOH HOH . HA 6 HOH C 19 341 101 HOH HOH . HA 6 HOH C 20 342 103 HOH HOH . HA 6 HOH C 21 343 108 HOH HOH . HA 6 HOH C 22 344 113 HOH HOH . HA 6 HOH C 23 345 119 HOH HOH . HA 6 HOH C 24 346 132 HOH HOH . HA 6 HOH C 25 347 133 HOH HOH . HA 6 HOH C 26 348 143 HOH HOH . HA 6 HOH C 27 349 148 HOH HOH . HA 6 HOH C 28 350 149 HOH HOH . IA 6 HOH D 1 323 1 HOH HOH . IA 6 HOH D 2 324 2 HOH HOH . IA 6 HOH D 3 325 3 HOH HOH . IA 6 HOH D 4 326 4 HOH HOH . IA 6 HOH D 5 327 5 HOH HOH . IA 6 HOH D 6 328 6 HOH HOH . IA 6 HOH D 7 329 7 HOH HOH . IA 6 HOH D 8 330 10 HOH HOH . IA 6 HOH D 9 331 11 HOH HOH . IA 6 HOH D 10 332 20 HOH HOH . IA 6 HOH D 11 333 30 HOH HOH . IA 6 HOH D 12 334 43 HOH HOH . IA 6 HOH D 13 335 44 HOH HOH . IA 6 HOH D 14 336 45 HOH HOH . IA 6 HOH D 15 337 47 HOH HOH . IA 6 HOH D 16 338 51 HOH HOH . IA 6 HOH D 17 339 80 HOH HOH . IA 6 HOH D 18 340 81 HOH HOH . IA 6 HOH D 19 341 82 HOH HOH . IA 6 HOH D 20 342 90 HOH HOH . IA 6 HOH D 21 343 100 HOH HOH . IA 6 HOH D 22 344 102 HOH HOH . IA 6 HOH D 23 345 104 HOH HOH . IA 6 HOH D 24 346 109 HOH HOH . IA 6 HOH D 25 347 112 HOH HOH . IA 6 HOH D 26 348 120 HOH HOH . IA 6 HOH D 27 349 124 HOH HOH . IA 6 HOH D 28 350 135 HOH HOH . IA 6 HOH D 29 351 136 HOH HOH . IA 6 HOH D 30 352 137 HOH HOH . IA 6 HOH D 31 353 139 HOH HOH . IA 6 HOH D 32 354 142 HOH HOH . IA 6 HOH D 33 355 147 HOH HOH . IA 6 HOH D 34 356 151 HOH HOH . JA 6 HOH E 1 322 9 HOH HOH . JA 6 HOH E 2 323 17 HOH HOH . JA 6 HOH E 3 324 19 HOH HOH . JA 6 HOH E 4 325 22 HOH HOH . JA 6 HOH E 5 326 24 HOH HOH . JA 6 HOH E 6 327 25 HOH HOH . JA 6 HOH E 7 328 26 HOH HOH . JA 6 HOH E 8 329 27 HOH HOH . JA 6 HOH E 9 330 28 HOH HOH . JA 6 HOH E 10 331 29 HOH HOH . JA 6 HOH E 11 332 32 HOH HOH . JA 6 HOH E 12 333 41 HOH HOH . JA 6 HOH E 13 334 48 HOH HOH . JA 6 HOH E 14 335 49 HOH HOH . JA 6 HOH E 15 336 78 HOH HOH . JA 6 HOH E 16 337 79 HOH HOH . JA 6 HOH E 17 338 94 HOH HOH . JA 6 HOH E 18 339 105 HOH HOH . JA 6 HOH E 19 340 110 HOH HOH . JA 6 HOH E 20 341 111 HOH HOH . JA 6 HOH E 21 342 114 HOH HOH . JA 6 HOH E 22 343 116 HOH HOH . JA 6 HOH E 23 344 121 HOH HOH . JA 6 HOH E 24 345 126 HOH HOH . JA 6 HOH E 25 346 127 HOH HOH . JA 6 HOH E 26 347 138 HOH HOH . JA 6 HOH E 27 348 140 HOH HOH . JA 6 HOH E 28 349 141 HOH HOH . JA 6 HOH E 29 350 145 HOH HOH . JA 6 HOH E 30 351 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C' PLC . . . H 2 76.305 -6.012 63.478 1 87.56 ? C' PLC 320 A 1 HETATM 2 C C1' PLC . . . H 2 75.114 -6.477 62.587 1 90.13 ? C1' PLC 320 A 1 HETATM 3 C C2' PLC . . . H 2 75.456 -7.171 61.215 1 88.4 ? C2' PLC 320 A 1 HETATM 4 C C3' PLC . . . H 2 74.254 -7.351 60.254 1 87.35 ? C3' PLC 320 A 1 HETATM 5 C C4' PLC . . . H 2 74.713 -7.625 58.79 1 86.53 ? C4' PLC 320 A 1 HETATM 6 C C5' PLC . . . H 2 73.602 -7.752 57.728 1 85.67 ? C5' PLC 320 A 1 HETATM 7 C C6' PLC . . . H 2 74.067 -8.617 56.529 1 86.53 ? C6' PLC 320 A 1 HETATM 8 C C7' PLC . . . H 2 73.418 -8.379 55.139 1 86.13 ? C7' PLC 320 A 1 HETATM 9 C C8' PLC . . . H 2 74.379 -8.554 53.943 1 84.63 ? C8' PLC 320 A 1 HETATM 10 C CB PLC . . . H 2 74.086 -2.295 62.74 1 91.76 ? CB PLC 320 A 1 HETATM 11 C C1B PLC . . . H 2 73.405 -1.891 61.416 1 95.67 ? C1B PLC 320 A 1 HETATM 12 C C2B PLC . . . H 2 73.8 -2.694 60.151 1 97.04 ? C2B PLC 320 A 1 HETATM 13 C C3B PLC . . . H 2 72.752 -2.594 59 1 101.18 ? C3B PLC 320 A 1 HETATM 14 C C4B PLC . . . H 2 73.099 -3.395 57.702 1 103.52 ? C4B PLC 320 A 1 HETATM 15 C C5B PLC . . . H 2 72.279 -3.059 56.413 1 105.09 ? C5B PLC 320 A 1 HETATM 16 C C6B PLC . . . H 2 72.812 -3.704 55.093 1 106.22 ? C6B PLC 320 A 1 HETATM 17 C C7B PLC . . . H 2 72.438 -2.992 53.759 1 106.51 ? C7B PLC 320 A 1 HETATM 18 C C8B PLC . . . H 2 72.094 -3.959 52.595 1 107.08 ? C8B PLC 320 A 1 HETATM 19 C C9B PLC . . . H 2 71.816 -3.314 51.219 1 105.85 ? C9B PLC 320 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #