data_3UU5 # _model_server_result.job_id XXVzUOqFwPvFkAjMZwpEzg _model_server_result.datetime_utc '2024-11-06 03:06:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":324}' # _entry.id 3UU5 # _exptl.entry_id 3UU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.42 _cell.angle_gamma 90 _cell.entry_id 3UU5 _cell.length_a 181.86 _cell.length_b 132.98 _cell.length_c 160.42 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3UU5 _atom_sites.fract_transf_matrix[1][1] 0.005499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001211 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PLC A 1 318 1 PLC PLC . G 2 PLC A 1 319 2 PLC PLC . H 2 PLC A 1 320 11 PLC PLC . I 2 PLC A 1 321 12 PLC PLC . J 3 CL A 1 322 3 CL CL . K 4 LMT A 1 323 5 LMT LMT . L 5 NA A 1 324 1 NA NA . M 2 PLC B 1 318 3 PLC PLC . N 2 PLC B 1 319 4 PLC PLC . O 3 CL B 1 320 4 CL CL . P 4 LMT B 1 321 4 LMT LMT . Q 4 LMT B 1 322 6 LMT LMT . R 2 PLC C 1 318 5 PLC PLC . S 2 PLC C 1 319 6 PLC PLC . T 2 PLC C 1 320 13 PLC PLC . U 3 CL C 1 321 5 CL CL . V 4 LMT C 1 322 3 LMT LMT . W 2 PLC D 1 318 7 PLC PLC . X 2 PLC D 1 319 8 PLC PLC . Y 2 PLC D 1 320 14 PLC PLC . Z 3 CL D 1 321 1 CL CL . AA 4 LMT D 1 322 2 LMT LMT . BA 2 PLC E 1 318 9 PLC PLC . CA 2 PLC E 1 319 10 PLC PLC . DA 3 CL E 1 320 2 CL CL . EA 4 LMT E 1 321 1 LMT LMT . FA 6 HOH A 1 325 8 HOH HOH . FA 6 HOH A 2 326 13 HOH HOH . FA 6 HOH A 3 327 14 HOH HOH . FA 6 HOH A 4 328 15 HOH HOH . FA 6 HOH A 5 329 16 HOH HOH . FA 6 HOH A 6 330 18 HOH HOH . FA 6 HOH A 7 331 23 HOH HOH . FA 6 HOH A 8 332 33 HOH HOH . FA 6 HOH A 9 333 35 HOH HOH . FA 6 HOH A 10 334 42 HOH HOH . FA 6 HOH A 11 335 46 HOH HOH . FA 6 HOH A 12 336 60 HOH HOH . FA 6 HOH A 13 337 61 HOH HOH . FA 6 HOH A 14 338 62 HOH HOH . FA 6 HOH A 15 339 77 HOH HOH . FA 6 HOH A 16 340 87 HOH HOH . FA 6 HOH A 17 341 91 HOH HOH . FA 6 HOH A 18 342 92 HOH HOH . FA 6 HOH A 19 343 95 HOH HOH . FA 6 HOH A 20 344 96 HOH HOH . FA 6 HOH A 21 345 106 HOH HOH . FA 6 HOH A 22 346 107 HOH HOH . FA 6 HOH A 23 347 115 HOH HOH . FA 6 HOH A 24 348 117 HOH HOH . FA 6 HOH A 25 349 122 HOH HOH . FA 6 HOH A 26 350 128 HOH HOH . FA 6 HOH A 27 351 134 HOH HOH . FA 6 HOH A 28 352 144 HOH HOH . FA 6 HOH A 29 353 150 HOH HOH . GA 6 HOH B 1 323 12 HOH HOH . GA 6 HOH B 2 324 31 HOH HOH . GA 6 HOH B 3 325 37 HOH HOH . GA 6 HOH B 4 326 38 HOH HOH . GA 6 HOH B 5 327 39 HOH HOH . GA 6 HOH B 6 328 40 HOH HOH . GA 6 HOH B 7 329 53 HOH HOH . GA 6 HOH B 8 330 54 HOH HOH . GA 6 HOH B 9 331 55 HOH HOH . GA 6 HOH B 10 332 56 HOH HOH . GA 6 HOH B 11 333 57 HOH HOH . GA 6 HOH B 12 334 58 HOH HOH . GA 6 HOH B 13 335 59 HOH HOH . GA 6 HOH B 14 336 63 HOH HOH . GA 6 HOH B 15 337 64 HOH HOH . GA 6 HOH B 16 338 65 HOH HOH . GA 6 HOH B 17 339 66 HOH HOH . GA 6 HOH B 18 340 67 HOH HOH . GA 6 HOH B 19 341 68 HOH HOH . GA 6 HOH B 20 342 83 HOH HOH . GA 6 HOH B 21 343 84 HOH HOH . GA 6 HOH B 22 344 86 HOH HOH . GA 6 HOH B 23 345 88 HOH HOH . GA 6 HOH B 24 346 89 HOH HOH . GA 6 HOH B 25 347 118 HOH HOH . GA 6 HOH B 26 348 123 HOH HOH . GA 6 HOH B 27 349 125 HOH HOH . GA 6 HOH B 28 350 129 HOH HOH . GA 6 HOH B 29 351 130 HOH HOH . GA 6 HOH B 30 352 131 HOH HOH . GA 6 HOH B 31 353 146 HOH HOH . HA 6 HOH C 1 323 21 HOH HOH . HA 6 HOH C 2 324 34 HOH HOH . HA 6 HOH C 3 325 36 HOH HOH . HA 6 HOH C 4 326 50 HOH HOH . HA 6 HOH C 5 327 52 HOH HOH . HA 6 HOH C 6 328 69 HOH HOH . HA 6 HOH C 7 329 70 HOH HOH . HA 6 HOH C 8 330 71 HOH HOH . HA 6 HOH C 9 331 72 HOH HOH . HA 6 HOH C 10 332 73 HOH HOH . HA 6 HOH C 11 333 74 HOH HOH . HA 6 HOH C 12 334 75 HOH HOH . HA 6 HOH C 13 335 76 HOH HOH . HA 6 HOH C 14 336 85 HOH HOH . HA 6 HOH C 15 337 93 HOH HOH . HA 6 HOH C 16 338 97 HOH HOH . HA 6 HOH C 17 339 98 HOH HOH . HA 6 HOH C 18 340 99 HOH HOH . HA 6 HOH C 19 341 101 HOH HOH . HA 6 HOH C 20 342 103 HOH HOH . HA 6 HOH C 21 343 108 HOH HOH . HA 6 HOH C 22 344 113 HOH HOH . HA 6 HOH C 23 345 119 HOH HOH . HA 6 HOH C 24 346 132 HOH HOH . HA 6 HOH C 25 347 133 HOH HOH . HA 6 HOH C 26 348 143 HOH HOH . HA 6 HOH C 27 349 148 HOH HOH . HA 6 HOH C 28 350 149 HOH HOH . IA 6 HOH D 1 323 1 HOH HOH . IA 6 HOH D 2 324 2 HOH HOH . IA 6 HOH D 3 325 3 HOH HOH . IA 6 HOH D 4 326 4 HOH HOH . IA 6 HOH D 5 327 5 HOH HOH . IA 6 HOH D 6 328 6 HOH HOH . IA 6 HOH D 7 329 7 HOH HOH . IA 6 HOH D 8 330 10 HOH HOH . IA 6 HOH D 9 331 11 HOH HOH . IA 6 HOH D 10 332 20 HOH HOH . IA 6 HOH D 11 333 30 HOH HOH . IA 6 HOH D 12 334 43 HOH HOH . IA 6 HOH D 13 335 44 HOH HOH . IA 6 HOH D 14 336 45 HOH HOH . IA 6 HOH D 15 337 47 HOH HOH . IA 6 HOH D 16 338 51 HOH HOH . IA 6 HOH D 17 339 80 HOH HOH . IA 6 HOH D 18 340 81 HOH HOH . IA 6 HOH D 19 341 82 HOH HOH . IA 6 HOH D 20 342 90 HOH HOH . IA 6 HOH D 21 343 100 HOH HOH . IA 6 HOH D 22 344 102 HOH HOH . IA 6 HOH D 23 345 104 HOH HOH . IA 6 HOH D 24 346 109 HOH HOH . IA 6 HOH D 25 347 112 HOH HOH . IA 6 HOH D 26 348 120 HOH HOH . IA 6 HOH D 27 349 124 HOH HOH . IA 6 HOH D 28 350 135 HOH HOH . IA 6 HOH D 29 351 136 HOH HOH . IA 6 HOH D 30 352 137 HOH HOH . IA 6 HOH D 31 353 139 HOH HOH . IA 6 HOH D 32 354 142 HOH HOH . IA 6 HOH D 33 355 147 HOH HOH . IA 6 HOH D 34 356 151 HOH HOH . JA 6 HOH E 1 322 9 HOH HOH . JA 6 HOH E 2 323 17 HOH HOH . JA 6 HOH E 3 324 19 HOH HOH . JA 6 HOH E 4 325 22 HOH HOH . JA 6 HOH E 5 326 24 HOH HOH . JA 6 HOH E 6 327 25 HOH HOH . JA 6 HOH E 7 328 26 HOH HOH . JA 6 HOH E 8 329 27 HOH HOH . JA 6 HOH E 9 330 28 HOH HOH . JA 6 HOH E 10 331 29 HOH HOH . JA 6 HOH E 11 332 32 HOH HOH . JA 6 HOH E 12 333 41 HOH HOH . JA 6 HOH E 13 334 48 HOH HOH . JA 6 HOH E 14 335 49 HOH HOH . JA 6 HOH E 15 336 78 HOH HOH . JA 6 HOH E 16 337 79 HOH HOH . JA 6 HOH E 17 338 94 HOH HOH . JA 6 HOH E 18 339 105 HOH HOH . JA 6 HOH E 19 340 110 HOH HOH . JA 6 HOH E 20 341 111 HOH HOH . JA 6 HOH E 21 342 114 HOH HOH . JA 6 HOH E 22 343 116 HOH HOH . JA 6 HOH E 23 344 121 HOH HOH . JA 6 HOH E 24 345 126 HOH HOH . JA 6 HOH E 25 346 127 HOH HOH . JA 6 HOH E 26 347 138 HOH HOH . JA 6 HOH E 27 348 140 HOH HOH . JA 6 HOH E 28 349 141 HOH HOH . JA 6 HOH E 29 350 145 HOH HOH . JA 6 HOH E 30 351 152 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 65.446 _atom_site.Cartn_y -26.977 _atom_site.Cartn_z 62.107 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 99.17 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 324 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #