data_3UU8 # _model_server_result.job_id pTDIfRHO3qA-kvVucLGwKQ _model_server_result.datetime_utc '2024-11-06 01:57:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uu8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":320}' # _entry.id 3UU8 # _exptl.entry_id 3UU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 622.834 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIUNDECYL PHOSPHATIDYL CHOLINE' _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.21 _cell.angle_gamma 90 _cell.entry_id 3UU8 _cell.length_a 181.35 _cell.length_b 133.47 _cell.length_c 159.94 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 M N N ? 2 N N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 CA N N ? 2 DA N N # _chem_comp.formula 'C32 H65 N O8 P 1' _chem_comp.formula_weight 622.834 _chem_comp.id PLC _chem_comp.mon_nstd_flag . _chem_comp.name 'DIUNDECYL PHOSPHATIDYL CHOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PLC sing 342 n n C1 O3P PLC sing 343 n n C1 H11 PLC sing 344 n n C1 H12 PLC sing 345 n n C2 C3 PLC sing 346 n n C2 O2 PLC sing 347 n n C2 H2 PLC sing 348 n n C3 O3 PLC sing 349 n n C3 H31 PLC sing 350 n n C3 H32 PLC sing 351 n n C4 C5 PLC sing 352 n n C4 O4P PLC sing 353 n n C4 H41 PLC sing 354 n n C4 H42 PLC sing 355 n n C5 N PLC sing 356 n n C5 H51 PLC sing 357 n n C5 H52 PLC sing 358 n n C6 N PLC sing 359 n n C6 H61 PLC sing 360 n n C6 H62 PLC sing 361 n n C6 H63 PLC sing 362 n n C7 N PLC sing 363 n n C7 H71 PLC sing 364 n n C7 H72 PLC sing 365 n n C7 H73 PLC sing 366 n n C8 N PLC sing 367 n n C8 H81 PLC sing 368 n n C8 H82 PLC sing 369 n n C8 H83 PLC sing 370 n n C' C1' PLC sing 371 n n C' O' PLC doub 372 n n C' O2 PLC sing 373 n n C1' C2' PLC sing 374 n n C1' "H1'1" PLC sing 375 n n C1' "H1'2" PLC sing 376 n n C2' C3' PLC sing 377 n n C2' "H2'1" PLC sing 378 n n C2' "H2'2" PLC sing 379 n n C3' C4' PLC sing 380 n n C3' "H3'1" PLC sing 381 n n C3' "H3'2" PLC sing 382 n n C4' C5' PLC sing 383 n n C4' "H4'1" PLC sing 384 n n C4' "H4'2" PLC sing 385 n n C5' C6' PLC sing 386 n n C5' "H5'1" PLC sing 387 n n C5' "H5'2" PLC sing 388 n n C6' C7' PLC sing 389 n n C6' "H6'1" PLC sing 390 n n C6' "H6'2" PLC sing 391 n n C7' C8' PLC sing 392 n n C7' "H7'1" PLC sing 393 n n C7' "H7'2" PLC sing 394 n n C8' C9' PLC sing 395 n n C8' "H8'1" PLC sing 396 n n C8' "H8'2" PLC sing 397 n n C9' CA' PLC sing 398 n n C9' "H9'1" PLC sing 399 n n C9' "H9'2" PLC sing 400 n n CA' CB' PLC sing 401 n n CA' "HT'1" PLC sing 402 n n CA' "HT'2" PLC sing 403 n n CB' "HE'1" PLC sing 404 n n CB' "HE'2" PLC sing 405 n n CB' "HE'3" PLC sing 406 n n CB C1B PLC sing 407 n n CB OB PLC doub 408 n n CB O3 PLC sing 409 n n C1B C2B PLC sing 410 n n C1B H1A1 PLC sing 411 n n C1B H1A2 PLC sing 412 n n C2B C3B PLC sing 413 n n C2B H2A1 PLC sing 414 n n C2B H2A2 PLC sing 415 n n C3B C4B PLC sing 416 n n C3B H3A1 PLC sing 417 n n C3B H3A2 PLC sing 418 n n C4B C5B PLC sing 419 n n C4B H4A1 PLC sing 420 n n C4B H4A2 PLC sing 421 n n C5B C6B PLC sing 422 n n C5B H5A1 PLC sing 423 n n C5B H5A2 PLC sing 424 n n C6B C7B PLC sing 425 n n C6B H6A1 PLC sing 426 n n C6B H6A2 PLC sing 427 n n C7B C8B PLC sing 428 n n C7B H7A1 PLC sing 429 n n C7B H7A2 PLC sing 430 n n C8B C9B PLC sing 431 n n C8B H8A1 PLC sing 432 n n C8B H8A2 PLC sing 433 n n C9B CAA PLC sing 434 n n C9B H9A1 PLC sing 435 n n C9B H9A2 PLC sing 436 n n CAA CBA PLC sing 437 n n CAA HTA1 PLC sing 438 n n CAA HTA2 PLC sing 439 n n CBA HEA1 PLC sing 440 n n CBA HEA2 PLC sing 441 n n CBA HEA3 PLC sing 442 n n O1P P PLC doub 443 n n O2P P PLC sing 444 n n O2P HOP2 PLC sing 445 n n O3P P PLC sing 446 n n O4P P PLC sing 447 n n # _atom_sites.entry_id 3UU8 _atom_sites.fract_transf_matrix[1][1] 0.005514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001193 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PLC A 1 318 1 PLC PLC . G 2 PLC A 1 319 2 PLC PLC . H 2 PLC A 1 320 11 PLC PLC . I 2 PLC A 1 321 12 PLC PLC . J 3 CL A 1 322 3 CL CL . K 4 LMT A 1 323 5 LMT LMT . L 5 NA A 1 324 1 NA NA . M 2 PLC B 1 318 3 PLC PLC . N 2 PLC B 1 319 4 PLC PLC . O 3 CL B 1 320 4 CL CL . P 4 LMT B 1 321 4 LMT LMT . Q 4 LMT B 1 322 6 LMT LMT . R 2 PLC C 1 318 5 PLC PLC . S 2 PLC C 1 319 6 PLC PLC . T 2 PLC C 1 320 13 PLC PLC . U 2 PLC C 1 321 15 PLC PLC . V 3 CL C 1 322 5 CL CL . W 4 LMT C 1 323 3 LMT LMT . X 2 PLC D 1 318 7 PLC PLC . Y 2 PLC D 1 319 8 PLC PLC . Z 2 PLC D 1 320 14 PLC PLC . AA 3 CL D 1 321 1 CL CL . BA 4 LMT D 1 322 2 LMT LMT . CA 2 PLC E 1 318 9 PLC PLC . DA 2 PLC E 1 319 10 PLC PLC . EA 3 CL E 1 320 2 CL CL . FA 4 LMT E 1 321 1 LMT LMT . GA 6 HOH A 1 325 6 HOH HOH . GA 6 HOH A 2 326 7 HOH HOH . GA 6 HOH A 3 327 17 HOH HOH . GA 6 HOH A 4 328 18 HOH HOH . GA 6 HOH A 5 329 19 HOH HOH . GA 6 HOH A 6 330 33 HOH HOH . GA 6 HOH A 7 331 40 HOH HOH . GA 6 HOH A 8 332 42 HOH HOH . GA 6 HOH A 9 333 43 HOH HOH . HA 6 HOH B 1 323 10 HOH HOH . HA 6 HOH B 2 324 15 HOH HOH . HA 6 HOH B 3 325 16 HOH HOH . HA 6 HOH B 4 326 20 HOH HOH . HA 6 HOH B 5 327 21 HOH HOH . HA 6 HOH B 6 328 22 HOH HOH . HA 6 HOH B 7 329 23 HOH HOH . HA 6 HOH B 8 330 24 HOH HOH . HA 6 HOH B 9 331 28 HOH HOH . HA 6 HOH B 10 332 34 HOH HOH . HA 6 HOH B 11 333 45 HOH HOH . HA 6 HOH B 12 334 49 HOH HOH . IA 6 HOH C 1 324 13 HOH HOH . IA 6 HOH C 2 325 14 HOH HOH . IA 6 HOH C 3 326 25 HOH HOH . IA 6 HOH C 4 327 26 HOH HOH . IA 6 HOH C 5 328 27 HOH HOH . IA 6 HOH C 6 329 30 HOH HOH . IA 6 HOH C 7 330 35 HOH HOH . IA 6 HOH C 8 331 44 HOH HOH . IA 6 HOH C 9 332 47 HOH HOH . JA 6 HOH D 1 323 1 HOH HOH . JA 6 HOH D 2 324 2 HOH HOH . JA 6 HOH D 3 325 3 HOH HOH . JA 6 HOH D 4 326 4 HOH HOH . JA 6 HOH D 5 327 5 HOH HOH . JA 6 HOH D 6 328 12 HOH HOH . JA 6 HOH D 7 329 29 HOH HOH . JA 6 HOH D 8 330 31 HOH HOH . JA 6 HOH D 9 331 32 HOH HOH . JA 6 HOH D 10 332 48 HOH HOH . JA 6 HOH D 11 333 50 HOH HOH . JA 6 HOH D 12 334 51 HOH HOH . KA 6 HOH E 1 322 8 HOH HOH . KA 6 HOH E 2 323 9 HOH HOH . KA 6 HOH E 3 324 11 HOH HOH . KA 6 HOH E 4 325 36 HOH HOH . KA 6 HOH E 5 326 37 HOH HOH . KA 6 HOH E 6 327 38 HOH HOH . KA 6 HOH E 7 328 39 HOH HOH . KA 6 HOH E 8 329 41 HOH HOH . KA 6 HOH E 9 330 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C' PLC . . . Z 2 87.883 -28.488 57.289 1 38.67 ? C' PLC 320 D 1 HETATM 2 C C1' PLC . . . Z 2 86.457 -28.506 56.749 1 42.47 ? C1' PLC 320 D 1 HETATM 3 C C2' PLC . . . Z 2 86.212 -29.34 55.476 1 44.05 ? C2' PLC 320 D 1 HETATM 4 C C3' PLC . . . Z 2 84.996 -28.94 54.618 1 46.91 ? C3' PLC 320 D 1 HETATM 5 C C4' PLC . . . Z 2 84.514 -30.092 53.737 1 50.61 ? C4' PLC 320 D 1 HETATM 6 C C5' PLC . . . Z 2 83.639 -29.662 52.554 1 55.44 ? C5' PLC 320 D 1 HETATM 7 C C6' PLC . . . Z 2 83.946 -30.464 51.259 1 59.95 ? C6' PLC 320 D 1 HETATM 8 C C7' PLC . . . Z 2 82.785 -30.719 50.26 1 61.6 ? C7' PLC 320 D 1 HETATM 9 C C8' PLC . . . Z 2 82.492 -32.216 50.005 1 63.07 ? C8' PLC 320 D 1 HETATM 10 C C9' PLC . . . Z 2 82.344 -32.566 48.513 1 63.15 ? C9' PLC 320 D 1 HETATM 11 C CB PLC . . . Z 2 90.6 -25.369 55.391 1 67.99 ? CB PLC 320 D 1 HETATM 12 C C1B PLC . . . Z 2 90.781 -26.038 54.023 1 69.99 ? C1B PLC 320 D 1 HETATM 13 C C2B PLC . . . Z 2 89.462 -26.531 53.366 1 70.11 ? C2B PLC 320 D 1 HETATM 14 C C3B PLC . . . Z 2 89.229 -26.125 51.889 1 69.74 ? C3B PLC 320 D 1 HETATM 15 C C4B PLC . . . Z 2 88.201 -27.045 51.222 1 69.45 ? C4B PLC 320 D 1 HETATM 16 C C5B PLC . . . Z 2 87.781 -26.661 49.797 1 70.83 ? C5B PLC 320 D 1 HETATM 17 C C6B PLC . . . Z 2 87.253 -27.903 49.03 1 72.2 ? C6B PLC 320 D 1 HETATM 18 C C7B PLC . . . Z 2 86.353 -27.594 47.81 1 73.46 ? C7B PLC 320 D 1 HETATM 19 C C8B PLC . . . Z 2 86.23 -28.723 46.762 1 73.42 ? C8B PLC 320 D 1 HETATM 20 C C9B PLC . . . Z 2 85.373 -28.353 45.53 1 73.09 ? C9B PLC 320 D 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 20 #