data_3UUB # _model_server_result.job_id w49_gcDnsxQ6S-u7UTnUIA _model_server_result.datetime_utc '2024-11-04 22:59:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uub # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"SA","auth_seq_id":319}' # _entry.id 3UUB # _exptl.entry_id 3UUB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 622.834 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIUNDECYL PHOSPHATIDYL CHOLINE' _entity.pdbx_number_of_molecules 30 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.64 _cell.angle_gamma 90 _cell.entry_id 3UUB _cell.length_a 182.13 _cell.length_b 133.49 _cell.length_c 319.69 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UUB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,MB,NB,OB,PB,QB 1 1 F,G,H,I,J,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,RB,SB,TB,UB,VB 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 X N N ? 2 Y N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 LA N N ? 2 MA N N ? 2 NA N N ? 2 RA N N ? 2 SA N N ? 2 WA N N ? 2 XA N N ? 2 YA N N ? 2 ZA N N ? 2 DB N N ? 2 EB N N ? 2 FB N N ? 2 HB N N ? 2 IB N N ? 2 JB N N # _chem_comp.formula 'C32 H65 N O8 P 1' _chem_comp.formula_weight 622.834 _chem_comp.id PLC _chem_comp.mon_nstd_flag . _chem_comp.name 'DIUNDECYL PHOSPHATIDYL CHOLINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PLC sing 342 n n C1 O3P PLC sing 343 n n C1 H11 PLC sing 344 n n C1 H12 PLC sing 345 n n C2 C3 PLC sing 346 n n C2 O2 PLC sing 347 n n C2 H2 PLC sing 348 n n C3 O3 PLC sing 349 n n C3 H31 PLC sing 350 n n C3 H32 PLC sing 351 n n C4 C5 PLC sing 352 n n C4 O4P PLC sing 353 n n C4 H41 PLC sing 354 n n C4 H42 PLC sing 355 n n C5 N PLC sing 356 n n C5 H51 PLC sing 357 n n C5 H52 PLC sing 358 n n C6 N PLC sing 359 n n C6 H61 PLC sing 360 n n C6 H62 PLC sing 361 n n C6 H63 PLC sing 362 n n C7 N PLC sing 363 n n C7 H71 PLC sing 364 n n C7 H72 PLC sing 365 n n C7 H73 PLC sing 366 n n C8 N PLC sing 367 n n C8 H81 PLC sing 368 n n C8 H82 PLC sing 369 n n C8 H83 PLC sing 370 n n C' C1' PLC sing 371 n n C' O' PLC doub 372 n n C' O2 PLC sing 373 n n C1' C2' PLC sing 374 n n C1' "H1'1" PLC sing 375 n n C1' "H1'2" PLC sing 376 n n C2' C3' PLC sing 377 n n C2' "H2'1" PLC sing 378 n n C2' "H2'2" PLC sing 379 n n C3' C4' PLC sing 380 n n C3' "H3'1" PLC sing 381 n n C3' "H3'2" PLC sing 382 n n C4' C5' PLC sing 383 n n C4' "H4'1" PLC sing 384 n n C4' "H4'2" PLC sing 385 n n C5' C6' PLC sing 386 n n C5' "H5'1" PLC sing 387 n n C5' "H5'2" PLC sing 388 n n C6' C7' PLC sing 389 n n C6' "H6'1" PLC sing 390 n n C6' "H6'2" PLC sing 391 n n C7' C8' PLC sing 392 n n C7' "H7'1" PLC sing 393 n n C7' "H7'2" PLC sing 394 n n C8' C9' PLC sing 395 n n C8' "H8'1" PLC sing 396 n n C8' "H8'2" PLC sing 397 n n C9' CA' PLC sing 398 n n C9' "H9'1" PLC sing 399 n n C9' "H9'2" PLC sing 400 n n CA' CB' PLC sing 401 n n CA' "HT'1" PLC sing 402 n n CA' "HT'2" PLC sing 403 n n CB' "HE'1" PLC sing 404 n n CB' "HE'2" PLC sing 405 n n CB' "HE'3" PLC sing 406 n n CB C1B PLC sing 407 n n CB OB PLC doub 408 n n CB O3 PLC sing 409 n n C1B C2B PLC sing 410 n n C1B H1A1 PLC sing 411 n n C1B H1A2 PLC sing 412 n n C2B C3B PLC sing 413 n n C2B H2A1 PLC sing 414 n n C2B H2A2 PLC sing 415 n n C3B C4B PLC sing 416 n n C3B H3A1 PLC sing 417 n n C3B H3A2 PLC sing 418 n n C4B C5B PLC sing 419 n n C4B H4A1 PLC sing 420 n n C4B H4A2 PLC sing 421 n n C5B C6B PLC sing 422 n n C5B H5A1 PLC sing 423 n n C5B H5A2 PLC sing 424 n n C6B C7B PLC sing 425 n n C6B H6A1 PLC sing 426 n n C6B H6A2 PLC sing 427 n n C7B C8B PLC sing 428 n n C7B H7A1 PLC sing 429 n n C7B H7A2 PLC sing 430 n n C8B C9B PLC sing 431 n n C8B H8A1 PLC sing 432 n n C8B H8A2 PLC sing 433 n n C9B CAA PLC sing 434 n n C9B H9A1 PLC sing 435 n n C9B H9A2 PLC sing 436 n n CAA CBA PLC sing 437 n n CAA HTA1 PLC sing 438 n n CAA HTA2 PLC sing 439 n n CBA HEA1 PLC sing 440 n n CBA HEA2 PLC sing 441 n n CBA HEA3 PLC sing 442 n n O1P P PLC doub 443 n n O2P P PLC sing 444 n n O2P HOP2 PLC sing 445 n n O3P P PLC sing 446 n n O4P P PLC sing 447 n n # _atom_sites.entry_id 3UUB _atom_sites.fract_transf_matrix[1][1] 0.005491 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001231 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 PLC A 1 318 1 PLC PLC . L 2 PLC A 1 319 2 PLC PLC . M 2 PLC A 1 320 11 PLC PLC . N 2 PLC A 1 321 12 PLC PLC . O 3 LMT A 1 322 5 LMT LMT . P 4 NA A 1 323 1 NA NA . Q 5 CL A 1 324 3 CL CL . R 2 PLC B 1 318 3 PLC PLC . S 2 PLC B 1 319 4 PLC PLC . T 2 PLC B 1 320 15 PLC PLC . U 3 LMT B 1 321 4 LMT LMT . V 3 LMT B 1 322 6 LMT LMT . W 5 CL B 1 323 4 CL CL . X 2 PLC C 1 318 5 PLC PLC . Y 2 PLC C 1 319 6 PLC PLC . Z 3 LMT C 1 320 3 LMT LMT . AA 5 CL C 1 321 5 CL CL . BA 2 PLC D 1 318 7 PLC PLC . CA 2 PLC D 1 319 8 PLC PLC . DA 2 PLC D 1 320 13 PLC PLC . EA 3 LMT D 1 321 2 LMT LMT . FA 5 CL D 1 322 1 CL CL . GA 2 PLC E 1 318 9 PLC PLC . HA 2 PLC E 1 319 10 PLC PLC . IA 2 PLC E 1 320 14 PLC PLC . JA 3 LMT E 1 321 1 LMT LMT . KA 5 CL E 1 322 2 CL CL . LA 2 PLC F 1 318 1 PLC PLC . MA 2 PLC F 1 319 2 PLC PLC . NA 2 PLC F 1 320 12 PLC PLC . OA 3 LMT F 1 321 5 LMT LMT . PA 4 NA F 1 322 1 NA NA . QA 5 CL F 1 323 3 CL CL . RA 2 PLC G 1 318 3 PLC PLC . SA 2 PLC G 1 319 4 PLC PLC . TA 3 LMT G 1 320 4 LMT LMT . UA 3 LMT G 1 321 6 LMT LMT . VA 5 CL G 1 322 4 CL CL . WA 2 PLC H 1 318 5 PLC PLC . XA 2 PLC H 1 319 6 PLC PLC . YA 2 PLC H 1 320 13 PLC PLC . ZA 2 PLC H 1 321 15 PLC PLC . AB 3 LMT H 1 322 2 LMT LMT . BB 3 LMT H 1 323 3 LMT LMT . CB 5 CL H 1 324 5 CL CL . DB 2 PLC I 1 318 7 PLC PLC . EB 2 PLC I 1 319 8 PLC PLC . FB 2 PLC I 1 320 14 PLC PLC . GB 5 CL I 1 321 1 CL CL . HB 2 PLC J 1 318 9 PLC PLC . IB 2 PLC J 1 319 10 PLC PLC . JB 2 PLC J 1 320 11 PLC PLC . KB 3 LMT J 1 321 1 LMT LMT . LB 5 CL J 1 322 2 CL CL . MB 6 HOH A 1 325 6 HOH HOH . MB 6 HOH A 2 326 11 HOH HOH . MB 6 HOH A 3 327 12 HOH HOH . MB 6 HOH A 4 328 13 HOH HOH . MB 6 HOH A 5 329 14 HOH HOH . MB 6 HOH A 6 330 18 HOH HOH . MB 6 HOH A 7 331 23 HOH HOH . MB 6 HOH A 8 332 34 HOH HOH . MB 6 HOH A 9 333 35 HOH HOH . MB 6 HOH A 10 334 43 HOH HOH . MB 6 HOH A 11 335 48 HOH HOH . MB 6 HOH A 12 336 58 HOH HOH . MB 6 HOH A 13 337 71 HOH HOH . NB 6 HOH B 1 324 15 HOH HOH . NB 6 HOH B 2 325 16 HOH HOH . NB 6 HOH B 3 326 17 HOH HOH . NB 6 HOH B 4 327 24 HOH HOH . NB 6 HOH B 5 328 30 HOH HOH . OB 6 HOH C 1 322 9 HOH HOH . OB 6 HOH C 2 323 10 HOH HOH . OB 6 HOH C 3 324 19 HOH HOH . OB 6 HOH C 4 325 20 HOH HOH . OB 6 HOH C 5 326 21 HOH HOH . OB 6 HOH C 6 327 25 HOH HOH . OB 6 HOH C 7 328 55 HOH HOH . OB 6 HOH C 8 329 56 HOH HOH . OB 6 HOH C 9 330 63 HOH HOH . OB 6 HOH C 10 331 75 HOH HOH . PB 6 HOH D 1 323 1 HOH HOH . PB 6 HOH D 2 324 2 HOH HOH . PB 6 HOH D 3 325 3 HOH HOH . PB 6 HOH D 4 326 4 HOH HOH . PB 6 HOH D 5 327 5 HOH HOH . PB 6 HOH D 6 328 22 HOH HOH . PB 6 HOH D 7 329 32 HOH HOH . PB 6 HOH D 8 330 38 HOH HOH . PB 6 HOH D 9 331 40 HOH HOH . PB 6 HOH D 10 332 41 HOH HOH . PB 6 HOH D 11 333 45 HOH HOH . PB 6 HOH D 12 334 52 HOH HOH . PB 6 HOH D 13 335 53 HOH HOH . PB 6 HOH D 14 336 54 HOH HOH . PB 6 HOH D 15 337 57 HOH HOH . QB 6 HOH E 1 323 7 HOH HOH . QB 6 HOH E 2 324 8 HOH HOH . QB 6 HOH E 3 325 26 HOH HOH . QB 6 HOH E 4 326 27 HOH HOH . QB 6 HOH E 5 327 28 HOH HOH . QB 6 HOH E 6 328 29 HOH HOH . QB 6 HOH E 7 329 31 HOH HOH . QB 6 HOH E 8 330 33 HOH HOH . QB 6 HOH E 9 331 36 HOH HOH . QB 6 HOH E 10 332 37 HOH HOH . QB 6 HOH E 11 333 39 HOH HOH . QB 6 HOH E 12 334 42 HOH HOH . QB 6 HOH E 13 335 44 HOH HOH . QB 6 HOH E 14 336 46 HOH HOH . QB 6 HOH E 15 337 47 HOH HOH . QB 6 HOH E 16 338 49 HOH HOH . QB 6 HOH E 17 339 50 HOH HOH . QB 6 HOH E 18 340 51 HOH HOH . QB 6 HOH E 19 341 59 HOH HOH . QB 6 HOH E 20 342 65 HOH HOH . RB 6 HOH F 1 324 81 HOH HOH . RB 6 HOH F 2 325 86 HOH HOH . RB 6 HOH F 3 326 87 HOH HOH . RB 6 HOH F 4 327 88 HOH HOH . RB 6 HOH F 5 328 99 HOH HOH . RB 6 HOH F 6 329 107 HOH HOH . SB 6 HOH G 1 323 67 HOH HOH . SB 6 HOH G 2 324 70 HOH HOH . SB 6 HOH G 3 325 72 HOH HOH . SB 6 HOH G 4 326 85 HOH HOH . SB 6 HOH G 5 327 89 HOH HOH . SB 6 HOH G 6 328 90 HOH HOH . SB 6 HOH G 7 329 91 HOH HOH . SB 6 HOH G 8 330 92 HOH HOH . SB 6 HOH G 9 331 96 HOH HOH . SB 6 HOH G 10 332 100 HOH HOH . SB 6 HOH G 11 333 108 HOH HOH . SB 6 HOH G 12 334 110 HOH HOH . TB 6 HOH H 1 325 60 HOH HOH . TB 6 HOH H 2 326 64 HOH HOH . TB 6 HOH H 3 327 68 HOH HOH . TB 6 HOH H 4 328 69 HOH HOH . TB 6 HOH H 5 329 73 HOH HOH . TB 6 HOH H 6 330 84 HOH HOH . TB 6 HOH H 7 331 93 HOH HOH . TB 6 HOH H 8 332 94 HOH HOH . TB 6 HOH H 9 333 95 HOH HOH . TB 6 HOH H 10 334 101 HOH HOH . TB 6 HOH H 11 335 109 HOH HOH . UB 6 HOH I 1 322 61 HOH HOH . UB 6 HOH I 2 323 74 HOH HOH . UB 6 HOH I 3 324 76 HOH HOH . UB 6 HOH I 4 325 77 HOH HOH . UB 6 HOH I 5 326 78 HOH HOH . UB 6 HOH I 6 327 79 HOH HOH . UB 6 HOH I 7 328 80 HOH HOH . UB 6 HOH I 8 329 97 HOH HOH . UB 6 HOH I 9 330 98 HOH HOH . VB 6 HOH J 1 323 62 HOH HOH . VB 6 HOH J 2 324 66 HOH HOH . VB 6 HOH J 3 325 82 HOH HOH . VB 6 HOH J 4 326 83 HOH HOH . VB 6 HOH J 5 327 102 HOH HOH . VB 6 HOH J 6 328 103 HOH HOH . VB 6 HOH J 7 329 104 HOH HOH . VB 6 HOH J 8 330 105 HOH HOH . VB 6 HOH J 9 331 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' PLC . . . SA 2 -11.976 -7.947 210.276 1 99.63 ? C1' PLC 319 G 1 HETATM 2 C C2' PLC . . . SA 2 -10.837 -8.508 211.129 1 101.06 ? C2' PLC 319 G 1 HETATM 3 C C3' PLC . . . SA 2 -9.932 -7.413 211.729 1 101.37 ? C3' PLC 319 G 1 HETATM 4 C C4' PLC . . . SA 2 -8.757 -7.986 212.549 1 101.41 ? C4' PLC 319 G 1 HETATM 5 C C5' PLC . . . SA 2 -7.512 -7.083 212.637 1 100.88 ? C5' PLC 319 G 1 HETATM 6 C C6' PLC . . . SA 2 -6.273 -7.822 213.177 1 100.58 ? C6' PLC 319 G 1 HETATM 7 C C7' PLC . . . SA 2 -5.258 -6.884 213.849 1 100.41 ? C7' PLC 319 G 1 HETATM 8 C C8' PLC . . . SA 2 -4.242 -7.607 214.751 1 100.28 ? C8' PLC 319 G 1 HETATM 9 C C9' PLC . . . SA 2 -2.937 -6.832 215.006 1 98.27 ? C9' PLC 319 G 1 # _model_server_stats.io_time_ms 188 _model_server_stats.parse_time_ms 93 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #