data_3UUS
#
_model_server_result.job_id            oxVxI2o3uwo2IiS2kYC5TQ 
_model_server_result.datetime_utc      '2024-12-01 18:44:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3uus 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":800}' 
#
_entry.id    3UUS 
#
_exptl.entry_id    3UUS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              491.182 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "2'-DEOXYADENOSINE 5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.91 
_cell.angle_gamma         90 
_cell.entry_id            3UUS 
_cell.length_a            287.358 
_cell.length_b            153.457 
_cell.length_c            169.416 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3UUS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 225 A CYS 225 1_555 A SG CYS 462 A CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
disulf ? disulf2 B SG CYS 225 B CYS 225 1_555 B SG CYS 462 B CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? 
disulf ? disulf3 C SG CYS 225 C CYS 225 1_555 C SG CYS 462 C CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 D SG CYS 225 D CYS 225 1_555 D SG CYS 462 D CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc1 E OD2 ASP 84 E ASP 84 1_555 Q FE FE . E FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc2 E OD1 ASP 84 E ASP 84 1_555 Q FE FE . E FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc3 E OE1 GLU 115 E GLU 115 1_555 Q FE FE . E FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.747 ? 
metalc ? metalc4 E OE2 GLU 115 E GLU 115 1_555 R FE FE . E FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc5 E ND1 HIS 118 E HIS 118 1_555 Q FE FE . E FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc6 E OE1 GLU 204 E GLU 204 1_555 R FE FE . E FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc7 E OE1 GLU 238 E GLU 238 1_555 R FE FE . E FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? 
metalc ? metalc8 E OE2 GLU 238 E GLU 238 1_555 R FE FE . E FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? 
metalc ? metalc9 E ND1 HIS 241 E HIS 241 1_555 R FE FE . E FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc10 F OD2 ASP 84 F ASP 84 1_555 S FE FE . F FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc11 F OD1 ASP 84 F ASP 84 1_555 S FE FE . F FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc12 F OE1 GLU 115 F GLU 115 1_555 S FE FE . F FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.719 ? 
metalc ? metalc13 F OE2 GLU 115 F GLU 115 1_555 T FE FE . F FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc14 F ND1 HIS 118 F HIS 118 1_555 S FE FE . F FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc15 F OE1 GLU 204 F GLU 204 1_555 T FE FE . F FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc16 F OE1 GLU 238 F GLU 238 1_555 T FE FE . F FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? 
metalc ? metalc17 F OE2 GLU 238 F GLU 238 1_555 T FE FE . F FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
metalc ? metalc18 F ND1 HIS 241 F HIS 241 1_555 T FE FE . F FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc19 G OD1 ASP 84 G ASP 84 1_555 U FE FE . G FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc20 G OD2 ASP 84 G ASP 84 1_555 U FE FE . G FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc21 G OE1 GLU 115 G GLU 115 1_555 U FE FE . G FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? 
metalc ? metalc22 G OE2 GLU 115 G GLU 115 1_555 V FE FE . G FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc23 G ND1 HIS 118 G HIS 118 1_555 U FE FE . G FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc24 G OE1 GLU 204 G GLU 204 1_555 V FE FE . G FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc25 G OE1 GLU 238 G GLU 238 1_555 V FE FE . G FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? 
metalc ? metalc26 G OE2 GLU 238 G GLU 238 1_555 V FE FE . G FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? 
metalc ? metalc27 G ND1 HIS 241 G HIS 241 1_555 V FE FE . G FE 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc28 H OD2 ASP 84 H ASP 84 1_555 W FE FE . H FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc29 H OD1 ASP 84 H ASP 84 1_555 W FE FE . H FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc30 H OE1 GLU 115 H GLU 115 1_555 W FE FE . H FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? 
metalc ? metalc31 H OE2 GLU 115 H GLU 115 1_555 X FE FE . H FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc32 H ND1 HIS 118 H HIS 118 1_555 W FE FE . H FE 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc33 H OE1 GLU 204 H GLU 204 1_555 X FE FE . H FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc34 H OE1 GLU 238 H GLU 238 1_555 X FE FE . H FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? 
metalc ? metalc35 H ND1 HIS 241 H HIS 241 1_555 X FE FE . H FE 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
#
_chem_comp.formula           'C10 H16 N5 O12 P3' 
_chem_comp.formula_weight    491.182 
_chem_comp.id                DTP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "2'-DEOXYADENOSINE 5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G DTP doub 83 n n 
PG O2G DTP sing 84 n n 
PG O3G DTP sing 85 n n 
PG O3B DTP sing 86 n n 
O2G HOG2 DTP sing 87 n n 
O3G HOG3 DTP sing 88 n n 
PB O1B DTP doub 89 n n 
PB O2B DTP sing 90 n n 
PB O3B DTP sing 91 n n 
PB O3A DTP sing 92 n n 
O2B HOB2 DTP sing 93 n n 
PA O1A DTP doub 94 n n 
PA O2A DTP sing 95 n n 
PA O3A DTP sing 96 n n 
PA O5' DTP sing 97 n n 
O2A HOA2 DTP sing 98 n n 
O5' C5' DTP sing 99 n n 
C5' C4' DTP sing 100 n n 
C5' "H5'1" DTP sing 101 n n 
C5' "H5'2" DTP sing 102 n n 
C4' O4' DTP sing 103 n n 
C4' C3' DTP sing 104 n n 
C4' H4' DTP sing 105 n n 
O4' C1' DTP sing 106 n n 
C3' O3' DTP sing 107 n n 
C3' C2' DTP sing 108 n n 
C3' H3' DTP sing 109 n n 
O3' HO3' DTP sing 110 n n 
C2' C1' DTP sing 111 n n 
C2' "H2'1" DTP sing 112 n n 
C2' "H2'2" DTP sing 113 n n 
C1' N9 DTP sing 114 n n 
C1' H1' DTP sing 115 n n 
N9 C8 DTP sing 116 n y 
N9 C4 DTP sing 117 n y 
C8 N7 DTP doub 118 n y 
C8 H8 DTP sing 119 n n 
N7 C5 DTP sing 120 n y 
C5 C6 DTP sing 121 n y 
C5 C4 DTP doub 122 n y 
C6 N6 DTP sing 123 n n 
C6 N1 DTP doub 124 n y 
N6 HN61 DTP sing 125 n n 
N6 HN62 DTP sing 126 n n 
N1 C2 DTP sing 127 n y 
C2 N3 DTP doub 128 n y 
C2 H2 DTP sing 129 n n 
N3 C4 DTP sing 130 n y 
#
_atom_sites.entry_id                     3UUS 
_atom_sites.fract_transf_matrix[1][1]    0.00348 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002002 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00681 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 DTP A 1 800 800 DTP DTP . 
J 3 DTP A 1 900 900 DTP DTP . 
K 3 DTP B 1 800 800 DTP DTP . 
L 3 DTP B 1 900 900 DTP DTP . 
M 3 DTP C 1 800 800 DTP DTP . 
N 3 DTP C 1 900 900 DTP DTP . 
O 3 DTP D 1 800 800 DTP DTP . 
P 3 DTP D 1 900 900 DTP DTP . 
Q 4 FE E 1 1003 1003 FE FE . 
R 4 FE E 1 1004 1004 FE FE . 
S 4 FE F 1 1001 1001 FE FE . 
T 4 FE F 1 1002 1002 FE FE . 
U 4 FE G 1 1003 1003 FE FE . 
V 4 FE G 1 1004 1004 FE FE . 
W 4 FE H 1 1001 1001 FE FE . 
X 4 FE H 1 1002 1002 FE FE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG DTP . . . O 3 90.034 21.736 16.424 1 318.22 ? PG DTP 800 D 1 
HETATM 2 O O1G DTP . . . O 3 89.791 23.089 15.804 1 318.22 ? O1G DTP 800 D 1 
HETATM 3 O O2G DTP . . . O 3 91.464 21.292 16.088 1 318.22 ? O2G DTP 800 D 1 
HETATM 4 O O3G DTP . . . O 3 89.87 21.847 17.921 1 318.22 ? O3G DTP 800 D 1 
HETATM 5 P PB DTP . . . O 3 88.688 19.347 16.52 1 318.22 ? PB DTP 800 D 1 
HETATM 6 O O1B DTP . . . O 3 88.63 18.256 15.472 1 318.22 ? O1B DTP 800 D 1 
HETATM 7 O O2B DTP . . . O 3 89.758 18.987 17.523 1 318.22 ? O2B DTP 800 D 1 
HETATM 8 O O3B DTP . . . O 3 89.009 20.721 15.831 1 318.22 ? O3B DTP 800 D 1 
HETATM 9 P PA DTP . . . O 3 87.033 20.45 18.417 1 318.22 ? PA DTP 800 D 1 
HETATM 10 O O1A DTP . . . O 3 88.14 20.387 19.393 1 318.22 ? O1A DTP 800 D 1 
HETATM 11 O O2A DTP . . . O 3 86.928 21.823 17.891 1 318.22 ? O2A DTP 800 D 1 
HETATM 12 O O3A DTP . . . O 3 87.274 19.435 17.248 1 318.22 ? O3A DTP 800 D 1 
HETATM 13 O O5' DTP . . . O 3 85.695 20.056 19.171 1 318.22 ? O5' DTP 800 D 1 
HETATM 14 C C5' DTP . . . O 3 85.31 18.777 19.16 1 318.22 ? C5' DTP 800 D 1 
HETATM 15 C C4' DTP . . . O 3 84.857 18.221 20.384 1 318.22 ? C4' DTP 800 D 1 
HETATM 16 O O4' DTP . . . O 3 84.972 16.779 20.307 1 318.22 ? O4' DTP 800 D 1 
HETATM 17 C C3' DTP . . . O 3 85.71 18.629 21.509 1 318.22 ? C3' DTP 800 D 1 
HETATM 18 O O3' DTP . . . O 3 84.989 18.444 22.629 1 318.22 ? O3' DTP 800 D 1 
HETATM 19 C C2' DTP . . . O 3 86.797 17.662 21.47 1 318.22 ? C2' DTP 800 D 1 
HETATM 20 C C1' DTP . . . O 3 86.173 16.424 20.938 1 318.22 ? C1' DTP 800 D 1 
HETATM 21 N N9 DTP . . . O 3 87.106 15.64 20.108 1 318.22 ? N9 DTP 800 D 1 
HETATM 22 C C8 DTP . . . O 3 87.319 15.746 18.78 1 318.22 ? C8 DTP 800 D 1 
HETATM 23 N N7 DTP . . . O 3 88.25 14.85 18.411 1 318.22 ? N7 DTP 800 D 1 
HETATM 24 C C5 DTP . . . O 3 88.637 14.165 19.516 1 318.22 ? C5 DTP 800 D 1 
HETATM 25 C C6 DTP . . . O 3 89.547 13.139 19.751 1 318.22 ? C6 DTP 800 D 1 
HETATM 26 N N6 DTP . . . O 3 90.33 12.585 18.642 1 318.22 ? N6 DTP 800 D 1 
HETATM 27 N N1 DTP . . . O 3 89.71 12.655 21.002 1 318.22 ? N1 DTP 800 D 1 
HETATM 28 C C2 DTP . . . O 3 88.987 13.174 21.995 1 318.22 ? C2 DTP 800 D 1 
HETATM 29 N N3 DTP . . . O 3 88.097 14.162 21.824 1 318.22 ? N3 DTP 800 D 1 
HETATM 30 C C4 DTP . . . O 3 87.909 14.668 20.592 1 318.22 ? C4 DTP 800 D 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    48 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           30 
#