data_3UVD # _model_server_result.job_id eX9S4WXvbvUrewIbhPkpnw _model_server_result.datetime_utc '2024-11-22 12:43:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uvd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3UVD # _exptl.entry_id 3UVD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 99.131 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methylpyrrolidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.45 _cell.angle_gamma 90 _cell.entry_id 3UVD _cell.length_a 30.2 _cell.length_b 29.89 _cell.length_c 67.06 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UVD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O' _chem_comp.formula_weight 99.131 _chem_comp.id MB3 _chem_comp.mon_nstd_flag . _chem_comp.name 1-methylpyrrolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA NAG MB3 sing 218 n n CAA HAA MB3 sing 219 n n CAA HAAA MB3 sing 220 n n CAA HAAB MB3 sing 221 n n CAF OAB MB3 doub 222 n n CAE CAC MB3 sing 223 n n CAC CAD MB3 sing 224 n n CAC HAC MB3 sing 225 n n CAC HACA MB3 sing 226 n n CAF CAD MB3 sing 227 n n CAD HAD MB3 sing 228 n n CAD HADA MB3 sing 229 n n NAG CAE MB3 sing 230 n n CAE HAE MB3 sing 231 n n CAE HAEA MB3 sing 232 n n NAG CAF MB3 sing 233 n n # _atom_sites.entry_id 3UVD _atom_sites.fract_transf_matrix[1][1] 0.033113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00026 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MB3 A 1 1 1 MB3 MB3 . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 12 12 HOH HOH . C 3 HOH A 12 13 13 HOH HOH . C 3 HOH A 13 14 14 HOH HOH . C 3 HOH A 14 15 15 HOH HOH . C 3 HOH A 15 16 16 HOH HOH . C 3 HOH A 16 17 17 HOH HOH . C 3 HOH A 17 18 18 HOH HOH . C 3 HOH A 18 19 19 HOH HOH . C 3 HOH A 19 20 20 HOH HOH . C 3 HOH A 20 21 21 HOH HOH . C 3 HOH A 21 23 23 HOH HOH . C 3 HOH A 22 24 24 HOH HOH . C 3 HOH A 23 25 25 HOH HOH . C 3 HOH A 24 26 26 HOH HOH . C 3 HOH A 25 27 27 HOH HOH . C 3 HOH A 26 28 28 HOH HOH . C 3 HOH A 27 29 29 HOH HOH . C 3 HOH A 28 30 30 HOH HOH . C 3 HOH A 29 31 31 HOH HOH . C 3 HOH A 30 32 32 HOH HOH . C 3 HOH A 31 33 33 HOH HOH . C 3 HOH A 32 34 34 HOH HOH . C 3 HOH A 33 35 35 HOH HOH . C 3 HOH A 34 36 36 HOH HOH . C 3 HOH A 35 37 37 HOH HOH . C 3 HOH A 36 38 38 HOH HOH . C 3 HOH A 37 39 39 HOH HOH . C 3 HOH A 38 40 40 HOH HOH . C 3 HOH A 39 41 41 HOH HOH . C 3 HOH A 40 42 42 HOH HOH . C 3 HOH A 41 43 43 HOH HOH . C 3 HOH A 42 44 44 HOH HOH . C 3 HOH A 43 45 45 HOH HOH . C 3 HOH A 44 46 46 HOH HOH . C 3 HOH A 45 47 47 HOH HOH . C 3 HOH A 46 48 48 HOH HOH . C 3 HOH A 47 49 49 HOH HOH . C 3 HOH A 48 50 50 HOH HOH . C 3 HOH A 49 51 51 HOH HOH . C 3 HOH A 50 52 52 HOH HOH . C 3 HOH A 51 53 53 HOH HOH . C 3 HOH A 52 54 54 HOH HOH . C 3 HOH A 53 55 55 HOH HOH . C 3 HOH A 54 56 56 HOH HOH . C 3 HOH A 55 57 57 HOH HOH . C 3 HOH A 56 58 58 HOH HOH . C 3 HOH A 57 59 59 HOH HOH . C 3 HOH A 58 60 60 HOH HOH . C 3 HOH A 59 61 61 HOH HOH . C 3 HOH A 60 62 62 HOH HOH . C 3 HOH A 61 1570 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA MB3 . . . B 2 8.479 15.936 44.492 1 44.21 ? CAA MB3 1 A 1 HETATM 2 O OAB MB3 . . . B 2 8.341 17.674 41.922 1 45.46 ? OAB MB3 1 A 1 HETATM 3 C CAC MB3 . . . B 2 5.887 14.992 41.79 1 60.27 ? CAC MB3 1 A 1 HETATM 4 C CAD MB3 . . . B 2 6.452 16.304 41.222 1 43.91 ? CAD MB3 1 A 1 HETATM 5 C CAE MB3 . . . B 2 6.51 14.878 43.187 1 63.34 ? CAE MB3 1 A 1 HETATM 6 C CAF MB3 . . . B 2 7.626 16.683 42.153 1 26.77 ? CAF MB3 1 A 1 HETATM 7 N NAG MB3 . . . B 2 7.561 15.926 43.276 1 42.65 ? NAG MB3 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #