data_3UVV # _model_server_result.job_id aVw6iPh1EtDybzR8ORGDhg _model_server_result.datetime_utc '2024-11-13 04:47:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uvv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3UVV # _exptl.entry_id 3UVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.435 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(9cis)-retinoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UVV _cell.length_a 129.13 _cell.length_b 165.32 _cell.length_c 85.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H28 O2' _chem_comp.formula_weight 300.435 _chem_comp.id 9CR _chem_comp.mon_nstd_flag . _chem_comp.name '(9cis)-retinoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C15 9CR doub 1 n n C15 C14 9CR sing 2 n n C15 O2 9CR sing 3 n n C14 C13 9CR doub 4 e n C13 C12 9CR sing 5 n n C13 C20 9CR sing 6 n n C12 C11 9CR doub 7 e n C11 C10 9CR sing 8 n n C18 C5 9CR sing 9 n n C10 C9 9CR doub 10 z n C9 C19 9CR sing 11 n n C9 C8 9CR sing 12 n n C8 C7 9CR doub 13 e n C5 C4 9CR sing 14 n n C5 C6 9CR doub 15 n n C4 C3 9CR sing 16 n n C7 C6 9CR sing 17 n n C6 C1 9CR sing 18 n n C3 C2 9CR sing 19 n n C1 C17 9CR sing 20 n n C1 C2 9CR sing 21 n n C1 C16 9CR sing 22 n n C2 H1 9CR sing 23 n n C2 H2 9CR sing 24 n n C3 H3 9CR sing 25 n n C3 H4 9CR sing 26 n n C4 H5 9CR sing 27 n n C4 H6 9CR sing 28 n n C7 H7 9CR sing 29 n n C8 H8 9CR sing 30 n n C10 H9 9CR sing 31 n n C11 H10 9CR sing 32 n n C12 H11 9CR sing 33 n n C14 H12 9CR sing 34 n n C16 H13 9CR sing 35 n n C16 H14 9CR sing 36 n n C16 H15 9CR sing 37 n n C17 H16 9CR sing 38 n n C17 H17 9CR sing 39 n n C17 H18 9CR sing 40 n n C18 H19 9CR sing 41 n n C18 H20 9CR sing 42 n n C18 H21 9CR sing 43 n n C19 H22 9CR sing 44 n n C19 H23 9CR sing 45 n n C19 H24 9CR sing 46 n n C20 H25 9CR sing 47 n n C20 H26 9CR sing 48 n n C20 H27 9CR sing 49 n n O2 H28 9CR sing 50 n n # _atom_sites.entry_id 3UVV _atom_sites.fract_transf_matrix[1][1] 0.007744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 T3 A 1 501 1 T3 T3 . D 4 9CR B 1 501 1 9CR REA . E 5 HOH A 1 601 2 HOH HOH . E 5 HOH A 2 602 5 HOH HOH . E 5 HOH A 3 603 6 HOH HOH . E 5 HOH A 4 604 7 HOH HOH . E 5 HOH A 5 605 9 HOH HOH . E 5 HOH A 6 606 17 HOH HOH . E 5 HOH A 7 607 18 HOH HOH . E 5 HOH A 8 608 19 HOH HOH . E 5 HOH A 9 609 20 HOH HOH . E 5 HOH A 10 610 31 HOH HOH . E 5 HOH A 11 611 32 HOH HOH . F 5 HOH B 1 601 1 HOH HOH . F 5 HOH B 2 602 3 HOH HOH . F 5 HOH B 3 603 4 HOH HOH . F 5 HOH B 4 604 12 HOH HOH . F 5 HOH B 5 605 21 HOH HOH . F 5 HOH B 6 606 24 HOH HOH . F 5 HOH B 7 607 25 HOH HOH . F 5 HOH B 8 608 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9CR . . . D 4 -12.784 -22.96 -10.423 0.92 112.75 ? C1 9CR 501 B 1 HETATM 2 C C2 9CR . . . D 4 -11.479 -22.695 -11.212 0.92 112.88 ? C2 9CR 501 B 1 HETATM 3 C C3 9CR . . . D 4 -11.21 -21.192 -11.49 0.92 99.4 ? C3 9CR 501 B 1 HETATM 4 C C4 9CR . . . D 4 -12.448 -20.271 -11.55 0.92 99.54 ? C4 9CR 501 B 1 HETATM 5 C C5 9CR . . . D 4 -13.764 -20.977 -11.633 0.92 106.93 ? C5 9CR 501 B 1 HETATM 6 C C6 9CR . . . D 4 -13.961 -22.225 -11.142 0.92 101.6 ? C6 9CR 501 B 1 HETATM 7 C C7 9CR . . . D 4 -15.256 -22.827 -11.246 0.92 99.79 ? C7 9CR 501 B 1 HETATM 8 C C8 9CR . . . D 4 -15.519 -24.069 -11.716 0.92 98.66 ? C8 9CR 501 B 1 HETATM 9 C C9 9CR . . . D 4 -16.846 -24.584 -11.754 0.92 97.18 ? C9 9CR 501 B 1 HETATM 10 C C10 9CR . . . D 4 -17.146 -25.832 -12.21 0.92 97.06 ? C10 9CR 501 B 1 HETATM 11 C C11 9CR . . . D 4 -16.224 -26.753 -12.644 0.92 96.71 ? C11 9CR 501 B 1 HETATM 12 C C12 9CR . . . D 4 -16.701 -27.94 -13.044 0.92 89.45 ? C12 9CR 501 B 1 HETATM 13 C C13 9CR . . . D 4 -15.851 -28.915 -13.594 0.92 90.44 ? C13 9CR 501 B 1 HETATM 14 C C14 9CR . . . D 4 -16.419 -30.141 -13.764 0.92 104.3 ? C14 9CR 501 B 1 HETATM 15 C C15 9CR . . . D 4 -15.837 -31.43 -13.954 0.92 104.1 ? C15 9CR 501 B 1 HETATM 16 C C16 9CR . . . D 4 -12.955 -24.459 -10.066 0.92 105.01 ? C16 9CR 501 B 1 HETATM 17 C C17 9CR . . . D 4 -12.469 -22.368 -9.059 0.92 111.37 ? C17 9CR 501 B 1 HETATM 18 C C18 9CR . . . D 4 -14.834 -20.167 -12.314 0.92 102.6 ? C18 9CR 501 B 1 HETATM 19 C C19 9CR . . . D 4 -18.045 -23.775 -11.329 0.92 96.89 ? C19 9CR 501 B 1 HETATM 20 C C20 9CR . . . D 4 -14.346 -28.711 -13.593 0.92 90.61 ? C20 9CR 501 B 1 HETATM 21 O O1 9CR . . . D 4 -14.659 -31.654 -14.175 0.92 103.39 ? O1 9CR 501 B 1 HETATM 22 O O2 9CR . . . D 4 -16.675 -32.47 -13.93 0.92 103.4 ? O2 9CR 501 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #