data_3UWA # _model_server_result.job_id jN0GvMDucchMV6W3n6daVg _model_server_result.datetime_utc '2024-11-23 12:11:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 3UWA # _exptl.entry_id 3UWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4R)-2-METHYLPENTANE-2,4-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3UWA _cell.length_a 47.46 _cell.length_b 58.63 _cell.length_c 62.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 26 A GLU 25 1_555 A N MSE 27 A MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C MSE 27 A MSE 26 1_555 A N SER 28 A SER 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C GLN 33 A GLN 32 1_555 A N MSE 34 A MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 34 A MSE 33 1_555 A N CYS 35 A CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C ALA 37 A ALA 36 1_555 A N MSE 38 A MSE 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale6 A C MSE 38 A MSE 37 1_555 A N TRP 39 A TRP 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C LEU 73 A LEU 72 1_555 A N MSE 74 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MSE 74 A MSE 73 1_555 A N VAL 75 A VAL 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? metalc ? metalc1 B ZN ZN . A ZN 200 1_555 E O HOH . A HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc2 A NE2 HIS 139 A HIS 138 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc3 A NE2 HIS 135 A HIS 134 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc4 A SG CYS 93 A CYS 92 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MRD _chem_comp.mon_nstd_flag . _chem_comp.name (4R)-2-METHYLPENTANE-2,4-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3UWA _atom_sites.fract_transf_matrix[1][1] 0.02107 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 200 200 ZN ZN . C 3 MRD A 1 201 201 MRD MPD . D 3 MRD A 1 202 202 MRD MPD . E 4 HOH A 1 154 1 HOH HOH . E 4 HOH A 2 155 2 HOH HOH . E 4 HOH A 3 156 3 HOH HOH . E 4 HOH A 4 157 4 HOH HOH . E 4 HOH A 5 158 5 HOH HOH . E 4 HOH A 6 159 6 HOH HOH . E 4 HOH A 7 160 7 HOH HOH . E 4 HOH A 8 161 8 HOH HOH . E 4 HOH A 9 162 9 HOH HOH . E 4 HOH A 10 163 10 HOH HOH . E 4 HOH A 11 164 11 HOH HOH . E 4 HOH A 12 165 12 HOH HOH . E 4 HOH A 13 166 13 HOH HOH . E 4 HOH A 14 167 14 HOH HOH . E 4 HOH A 15 168 15 HOH HOH . E 4 HOH A 16 169 16 HOH HOH . E 4 HOH A 17 170 17 HOH HOH . E 4 HOH A 18 171 18 HOH HOH . E 4 HOH A 19 172 19 HOH HOH . E 4 HOH A 20 173 20 HOH HOH . E 4 HOH A 21 174 21 HOH HOH . E 4 HOH A 22 175 22 HOH HOH . E 4 HOH A 23 176 23 HOH HOH . E 4 HOH A 24 177 24 HOH HOH . E 4 HOH A 25 178 25 HOH HOH . E 4 HOH A 26 179 26 HOH HOH . E 4 HOH A 27 180 27 HOH HOH . E 4 HOH A 28 181 28 HOH HOH . E 4 HOH A 29 182 30 HOH HOH . E 4 HOH A 30 183 31 HOH HOH . E 4 HOH A 31 184 32 HOH HOH . E 4 HOH A 32 185 33 HOH HOH . E 4 HOH A 33 186 34 HOH HOH . E 4 HOH A 34 187 35 HOH HOH . E 4 HOH A 35 188 36 HOH HOH . E 4 HOH A 36 189 37 HOH HOH . E 4 HOH A 37 190 38 HOH HOH . E 4 HOH A 38 191 39 HOH HOH . E 4 HOH A 39 192 40 HOH HOH . E 4 HOH A 40 193 41 HOH HOH . E 4 HOH A 41 194 42 HOH HOH . E 4 HOH A 42 195 43 HOH HOH . E 4 HOH A 43 196 44 HOH HOH . E 4 HOH A 44 197 45 HOH HOH . E 4 HOH A 45 198 46 HOH HOH . E 4 HOH A 46 199 47 HOH HOH . E 4 HOH A 47 203 48 HOH HOH . E 4 HOH A 48 204 49 HOH HOH . E 4 HOH A 49 205 50 HOH HOH . E 4 HOH A 50 206 51 HOH HOH . E 4 HOH A 51 207 52 HOH HOH . E 4 HOH A 52 208 53 HOH HOH . E 4 HOH A 53 209 54 HOH HOH . E 4 HOH A 54 210 55 HOH HOH . E 4 HOH A 55 211 56 HOH HOH . E 4 HOH A 56 212 57 HOH HOH . E 4 HOH A 57 213 58 HOH HOH . E 4 HOH A 58 214 59 HOH HOH . E 4 HOH A 59 215 60 HOH HOH . E 4 HOH A 60 216 61 HOH HOH . E 4 HOH A 61 217 62 HOH HOH . E 4 HOH A 62 218 63 HOH HOH . E 4 HOH A 63 219 64 HOH HOH . E 4 HOH A 64 220 65 HOH HOH . E 4 HOH A 65 221 66 HOH HOH . E 4 HOH A 66 222 67 HOH HOH . E 4 HOH A 67 223 68 HOH HOH . E 4 HOH A 68 224 69 HOH HOH . E 4 HOH A 69 225 70 HOH HOH . E 4 HOH A 70 226 71 HOH HOH . E 4 HOH A 71 227 72 HOH HOH . E 4 HOH A 72 228 74 HOH HOH . E 4 HOH A 73 229 75 HOH HOH . E 4 HOH A 74 230 76 HOH HOH . E 4 HOH A 75 231 77 HOH HOH . E 4 HOH A 76 232 78 HOH HOH . E 4 HOH A 77 233 79 HOH HOH . E 4 HOH A 78 234 80 HOH HOH . E 4 HOH A 79 235 81 HOH HOH . E 4 HOH A 80 236 82 HOH HOH . E 4 HOH A 81 237 83 HOH HOH . E 4 HOH A 82 238 84 HOH HOH . E 4 HOH A 83 239 85 HOH HOH . E 4 HOH A 84 240 86 HOH HOH . E 4 HOH A 85 241 87 HOH HOH . E 4 HOH A 86 242 88 HOH HOH . E 4 HOH A 87 243 89 HOH HOH . E 4 HOH A 88 244 90 HOH HOH . E 4 HOH A 89 245 91 HOH HOH . E 4 HOH A 90 246 92 HOH HOH . E 4 HOH A 91 247 93 HOH HOH . E 4 HOH A 92 248 94 HOH HOH . E 4 HOH A 93 249 95 HOH HOH . E 4 HOH A 94 250 96 HOH HOH . E 4 HOH A 95 251 98 HOH HOH . E 4 HOH A 96 252 99 HOH HOH . E 4 HOH A 97 253 100 HOH HOH . E 4 HOH A 98 254 101 HOH HOH . E 4 HOH A 99 255 102 HOH HOH . E 4 HOH A 100 256 103 HOH HOH . E 4 HOH A 101 257 104 HOH HOH . E 4 HOH A 102 258 105 HOH HOH . E 4 HOH A 103 259 106 HOH HOH . E 4 HOH A 104 260 107 HOH HOH . E 4 HOH A 105 261 108 HOH HOH . E 4 HOH A 106 262 109 HOH HOH . E 4 HOH A 107 263 110 HOH HOH . E 4 HOH A 108 264 111 HOH HOH . E 4 HOH A 109 265 113 HOH HOH . E 4 HOH A 110 266 114 HOH HOH . E 4 HOH A 111 267 115 HOH HOH . E 4 HOH A 112 268 116 HOH HOH . E 4 HOH A 113 269 117 HOH HOH . E 4 HOH A 114 270 118 HOH HOH . E 4 HOH A 115 271 119 HOH HOH . E 4 HOH A 116 272 120 HOH HOH . E 4 HOH A 117 273 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MRD . . . D 3 2.116 22.98 16.971 1 29.13 ? C1 MRD 202 A 1 HETATM 2 C C2 MRD . . . D 3 2.895 23.94 17.875 1 29.19 ? C2 MRD 202 A 1 HETATM 3 O O2 MRD . . . D 3 3.736 23.127 18.722 1 29.03 ? O2 MRD 202 A 1 HETATM 4 C CM MRD . . . D 3 3.712 24.917 17.025 1 27.1 ? CM MRD 202 A 1 HETATM 5 C C3 MRD . . . D 3 2.018 24.822 18.779 1 31.11 ? C3 MRD 202 A 1 HETATM 6 C C4 MRD . . . D 3 1.263 24.067 19.852 1 33.29 ? C4 MRD 202 A 1 HETATM 7 O O4 MRD . . . D 3 0.176 23.444 19.159 1 36.1 ? O4 MRD 202 A 1 HETATM 8 C C5 MRD . . . D 3 0.768 24.98 20.974 1 35.94 ? C5 MRD 202 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #