data_3UWP # _model_server_result.job_id F8PqsOyaAeSzFr1aEta4BQ _model_server_result.datetime_utc '2024-11-27 21:06:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":424}' # _entry.id 3UWP # _exptl.entry_id 3UWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3UWP _cell.length_a 149.784 _cell.length_b 149.784 _cell.length_c 53.521 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 70 A LYS 52 1_555 E NA NA . A NA 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc2 A O LEU 71 A LEU 53 1_555 E NA NA . A NA 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc3 A O MET 73 A MET 55 1_555 E NA NA . A NA 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 A OD1 ASN 75 A ASN 57 1_555 E NA NA . A NA 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc5 E NA NA . A NA 424 1_555 L O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc6 E NA NA . A NA 424 1_555 L O HOH . A HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3UWP _atom_sites.fract_transf_matrix[1][1] 0.006676 _atom_sites.fract_transf_matrix[1][2] 0.003855 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5ID A 1 421 1 5ID 5ID . C 3 IOD A 1 422 1 IOD IOD . D 3 IOD A 1 423 2 IOD IOD . E 4 NA A 1 424 1 NA NA . F 5 UNX A 1 425 3 UNX UNX . G 5 UNX A 1 426 4 UNX UNX . H 5 UNX A 1 427 5 UNX UNX . I 5 UNX A 1 428 6 UNX UNX . J 5 UNX A 1 429 8 UNX UNX . K 5 UNX A 1 430 9 UNX UNX . L 6 HOH A 1 431 5 HOH HOH . L 6 HOH A 2 432 6 HOH HOH . L 6 HOH A 3 433 7 HOH HOH . L 6 HOH A 4 434 9 HOH HOH . L 6 HOH A 5 435 10 HOH HOH . L 6 HOH A 6 436 11 HOH HOH . L 6 HOH A 7 437 13 HOH HOH . L 6 HOH A 8 438 15 HOH HOH . L 6 HOH A 9 439 16 HOH HOH . L 6 HOH A 10 440 20 HOH HOH . L 6 HOH A 11 441 21 HOH HOH . L 6 HOH A 12 442 22 HOH HOH . L 6 HOH A 13 443 24 HOH HOH . L 6 HOH A 14 444 25 HOH HOH . L 6 HOH A 15 445 26 HOH HOH . L 6 HOH A 16 446 27 HOH HOH . L 6 HOH A 17 447 29 HOH HOH . L 6 HOH A 18 448 30 HOH HOH . L 6 HOH A 19 449 32 HOH HOH . L 6 HOH A 20 450 33 HOH HOH . L 6 HOH A 21 451 35 HOH HOH . L 6 HOH A 22 452 37 HOH HOH . L 6 HOH A 23 453 38 HOH HOH . L 6 HOH A 24 454 40 HOH HOH . L 6 HOH A 25 455 42 HOH HOH . L 6 HOH A 26 456 43 HOH HOH . L 6 HOH A 27 457 44 HOH HOH . L 6 HOH A 28 458 45 HOH HOH . L 6 HOH A 29 459 47 HOH HOH . L 6 HOH A 30 460 48 HOH HOH . L 6 HOH A 31 461 49 HOH HOH . L 6 HOH A 32 462 51 HOH HOH . L 6 HOH A 33 463 52 HOH HOH . L 6 HOH A 34 464 55 HOH HOH . L 6 HOH A 35 465 56 HOH HOH . L 6 HOH A 36 466 57 HOH HOH . L 6 HOH A 37 467 59 HOH HOH . L 6 HOH A 38 468 61 HOH HOH . L 6 HOH A 39 469 62 HOH HOH . L 6 HOH A 40 470 63 HOH HOH . L 6 HOH A 41 471 64 HOH HOH . L 6 HOH A 42 472 65 HOH HOH . L 6 HOH A 43 473 66 HOH HOH . L 6 HOH A 44 474 67 HOH HOH . L 6 HOH A 45 475 69 HOH HOH . L 6 HOH A 46 476 70 HOH HOH . L 6 HOH A 47 477 71 HOH HOH . L 6 HOH A 48 478 72 HOH HOH . L 6 HOH A 49 479 73 HOH HOH . L 6 HOH A 50 480 74 HOH HOH . L 6 HOH A 51 481 75 HOH HOH . L 6 HOH A 52 482 76 HOH HOH . L 6 HOH A 53 483 77 HOH HOH . L 6 HOH A 54 484 79 HOH HOH . L 6 HOH A 55 485 80 HOH HOH . L 6 HOH A 56 486 81 HOH HOH . L 6 HOH A 57 487 82 HOH HOH . L 6 HOH A 58 488 83 HOH HOH . L 6 HOH A 59 489 84 HOH HOH . L 6 HOH A 60 490 85 HOH HOH . L 6 HOH A 61 491 86 HOH HOH . L 6 HOH A 62 492 87 HOH HOH . L 6 HOH A 63 493 88 HOH HOH . L 6 HOH A 64 494 89 HOH HOH . L 6 HOH A 65 495 90 HOH HOH . L 6 HOH A 66 496 91 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 54.926 _atom_site.Cartn_y 53.457 _atom_site.Cartn_z 17.368 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 424 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #