data_3UXI # _model_server_result.job_id 4C2eFewf8DYjijg2gSilsw _model_server_result.datetime_utc '2024-10-19 21:43:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3uxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":419}' # _entry.id 3UXI # _exptl.entry_id 3UXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.02 _cell.angle_gamma 90 _cell.entry_id 3UXI _cell.length_a 83.38 _cell.length_b 164.794 _cell.length_c 92.837 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3UXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 231 A GLU 225 1_555 E MN MN . A MN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc2 A OD2 ASP 331 A ASP 325 1_555 E MN MN . A MN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3UXI _atom_sites.fract_transf_matrix[1][1] 0.011993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006068 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MN A 1 419 4 MN MN . F 3 HOH A 1 420 1 HOH HOH . F 3 HOH A 2 421 11 HOH HOH . F 3 HOH A 3 422 14 HOH HOH . F 3 HOH A 4 423 26 HOH HOH . F 3 HOH A 5 424 27 HOH HOH . F 3 HOH A 6 425 28 HOH HOH . F 3 HOH A 7 426 35 HOH HOH . F 3 HOH A 8 427 43 HOH HOH . F 3 HOH A 9 428 44 HOH HOH . F 3 HOH A 10 429 53 HOH HOH . F 3 HOH A 11 430 55 HOH HOH . F 3 HOH A 12 431 56 HOH HOH . F 3 HOH A 13 432 58 HOH HOH . F 3 HOH A 14 433 61 HOH HOH . F 3 HOH A 15 434 62 HOH HOH . F 3 HOH A 16 435 64 HOH HOH . F 3 HOH A 17 436 65 HOH HOH . F 3 HOH A 18 437 67 HOH HOH . F 3 HOH A 19 438 68 HOH HOH . F 3 HOH A 20 439 71 HOH HOH . F 3 HOH A 21 440 74 HOH HOH . F 3 HOH A 22 441 77 HOH HOH . F 3 HOH A 23 442 79 HOH HOH . F 3 HOH A 24 443 83 HOH HOH . F 3 HOH A 25 444 85 HOH HOH . F 3 HOH A 26 445 93 HOH HOH . F 3 HOH A 27 446 94 HOH HOH . F 3 HOH A 28 447 97 HOH HOH . F 3 HOH A 29 448 103 HOH HOH . F 3 HOH A 30 449 106 HOH HOH . F 3 HOH A 31 450 110 HOH HOH . F 3 HOH A 32 451 118 HOH HOH . F 3 HOH A 33 452 121 HOH HOH . F 3 HOH A 34 453 128 HOH HOH . F 3 HOH A 35 454 132 HOH HOH . F 3 HOH A 36 455 133 HOH HOH . F 3 HOH A 37 456 136 HOH HOH . F 3 HOH A 38 457 137 HOH HOH . F 3 HOH A 39 458 138 HOH HOH . F 3 HOH A 40 459 140 HOH HOH . F 3 HOH A 41 460 144 HOH HOH . F 3 HOH A 42 461 146 HOH HOH . F 3 HOH A 43 462 147 HOH HOH . F 3 HOH A 44 463 148 HOH HOH . F 3 HOH A 45 464 149 HOH HOH . F 3 HOH A 46 465 164 HOH HOH . F 3 HOH A 47 466 165 HOH HOH . F 3 HOH A 48 467 166 HOH HOH . F 3 HOH A 49 468 168 HOH HOH . F 3 HOH A 50 469 170 HOH HOH . F 3 HOH A 51 470 178 HOH HOH . F 3 HOH A 52 471 179 HOH HOH . F 3 HOH A 53 472 181 HOH HOH . F 3 HOH A 54 473 191 HOH HOH . F 3 HOH A 55 474 192 HOH HOH . F 3 HOH A 56 475 199 HOH HOH . F 3 HOH A 57 476 208 HOH HOH . F 3 HOH A 58 477 209 HOH HOH . F 3 HOH A 59 478 211 HOH HOH . F 3 HOH A 60 479 213 HOH HOH . F 3 HOH A 61 480 216 HOH HOH . F 3 HOH A 62 481 223 HOH HOH . F 3 HOH A 63 482 228 HOH HOH . F 3 HOH A 64 483 230 HOH HOH . F 3 HOH A 65 484 232 HOH HOH . F 3 HOH A 66 485 234 HOH HOH . F 3 HOH A 67 486 235 HOH HOH . F 3 HOH A 68 487 240 HOH HOH . F 3 HOH A 69 488 241 HOH HOH . F 3 HOH A 70 489 242 HOH HOH . F 3 HOH A 71 490 247 HOH HOH . F 3 HOH A 72 491 248 HOH HOH . F 3 HOH A 73 492 249 HOH HOH . F 3 HOH A 74 493 251 HOH HOH . F 3 HOH A 75 494 256 HOH HOH . F 3 HOH A 76 495 258 HOH HOH . G 3 HOH B 1 419 4 HOH HOH . G 3 HOH B 2 420 7 HOH HOH . G 3 HOH B 3 421 9 HOH HOH . G 3 HOH B 4 422 16 HOH HOH . G 3 HOH B 5 423 17 HOH HOH . G 3 HOH B 6 424 21 HOH HOH . G 3 HOH B 7 425 24 HOH HOH . G 3 HOH B 8 426 31 HOH HOH . G 3 HOH B 9 427 34 HOH HOH . G 3 HOH B 10 428 38 HOH HOH . G 3 HOH B 11 429 39 HOH HOH . G 3 HOH B 12 430 41 HOH HOH . G 3 HOH B 13 431 52 HOH HOH . G 3 HOH B 14 432 59 HOH HOH . G 3 HOH B 15 433 70 HOH HOH . G 3 HOH B 16 434 72 HOH HOH . G 3 HOH B 17 435 78 HOH HOH . G 3 HOH B 18 436 80 HOH HOH . G 3 HOH B 19 437 86 HOH HOH . G 3 HOH B 20 438 87 HOH HOH . G 3 HOH B 21 439 90 HOH HOH . G 3 HOH B 22 440 95 HOH HOH . G 3 HOH B 23 441 102 HOH HOH . G 3 HOH B 24 442 107 HOH HOH . G 3 HOH B 25 443 109 HOH HOH . G 3 HOH B 26 444 112 HOH HOH . G 3 HOH B 27 445 115 HOH HOH . G 3 HOH B 28 446 119 HOH HOH . G 3 HOH B 29 447 120 HOH HOH . G 3 HOH B 30 448 125 HOH HOH . G 3 HOH B 31 449 129 HOH HOH . G 3 HOH B 32 450 139 HOH HOH . G 3 HOH B 33 451 141 HOH HOH . G 3 HOH B 34 452 145 HOH HOH . G 3 HOH B 35 453 156 HOH HOH . G 3 HOH B 36 454 157 HOH HOH . G 3 HOH B 37 455 159 HOH HOH . G 3 HOH B 38 456 160 HOH HOH . G 3 HOH B 39 457 161 HOH HOH . G 3 HOH B 40 458 175 HOH HOH . G 3 HOH B 41 459 176 HOH HOH . G 3 HOH B 42 460 182 HOH HOH . G 3 HOH B 43 461 186 HOH HOH . G 3 HOH B 44 462 187 HOH HOH . G 3 HOH B 45 463 188 HOH HOH . G 3 HOH B 46 464 189 HOH HOH . G 3 HOH B 47 465 194 HOH HOH . G 3 HOH B 48 466 200 HOH HOH . G 3 HOH B 49 467 212 HOH HOH . G 3 HOH B 50 468 220 HOH HOH . G 3 HOH B 51 469 222 HOH HOH . G 3 HOH B 52 470 224 HOH HOH . G 3 HOH B 53 471 226 HOH HOH . G 3 HOH B 54 472 236 HOH HOH . G 3 HOH B 55 473 250 HOH HOH . G 3 HOH B 56 474 252 HOH HOH . G 3 HOH B 57 475 253 HOH HOH . G 3 HOH B 58 476 254 HOH HOH . G 3 HOH B 59 477 255 HOH HOH . G 3 HOH B 60 478 257 HOH HOH . G 3 HOH B 61 479 260 HOH HOH . G 3 HOH B 62 480 263 HOH HOH . H 3 HOH C 1 419 3 HOH HOH . H 3 HOH C 2 420 5 HOH HOH . H 3 HOH C 3 421 8 HOH HOH . H 3 HOH C 4 422 13 HOH HOH . H 3 HOH C 5 423 18 HOH HOH . H 3 HOH C 6 424 19 HOH HOH . H 3 HOH C 7 425 22 HOH HOH . H 3 HOH C 8 426 23 HOH HOH . H 3 HOH C 9 427 25 HOH HOH . H 3 HOH C 10 428 30 HOH HOH . H 3 HOH C 11 429 36 HOH HOH . H 3 HOH C 12 430 37 HOH HOH . H 3 HOH C 13 431 46 HOH HOH . H 3 HOH C 14 432 47 HOH HOH . H 3 HOH C 15 433 49 HOH HOH . H 3 HOH C 16 434 50 HOH HOH . H 3 HOH C 17 435 54 HOH HOH . H 3 HOH C 18 436 60 HOH HOH . H 3 HOH C 19 437 66 HOH HOH . H 3 HOH C 20 438 69 HOH HOH . H 3 HOH C 21 439 75 HOH HOH . H 3 HOH C 22 440 76 HOH HOH . H 3 HOH C 23 441 82 HOH HOH . H 3 HOH C 24 442 88 HOH HOH . H 3 HOH C 25 443 92 HOH HOH . H 3 HOH C 26 444 96 HOH HOH . H 3 HOH C 27 445 98 HOH HOH . H 3 HOH C 28 446 101 HOH HOH . H 3 HOH C 29 447 113 HOH HOH . H 3 HOH C 30 448 117 HOH HOH . H 3 HOH C 31 449 122 HOH HOH . H 3 HOH C 32 450 124 HOH HOH . H 3 HOH C 33 451 126 HOH HOH . H 3 HOH C 34 452 131 HOH HOH . H 3 HOH C 35 453 134 HOH HOH . H 3 HOH C 36 454 143 HOH HOH . H 3 HOH C 37 455 163 HOH HOH . H 3 HOH C 38 456 169 HOH HOH . H 3 HOH C 39 457 173 HOH HOH . H 3 HOH C 40 458 180 HOH HOH . H 3 HOH C 41 459 185 HOH HOH . H 3 HOH C 42 460 190 HOH HOH . H 3 HOH C 43 461 195 HOH HOH . H 3 HOH C 44 462 196 HOH HOH . H 3 HOH C 45 463 197 HOH HOH . H 3 HOH C 46 464 198 HOH HOH . H 3 HOH C 47 465 201 HOH HOH . H 3 HOH C 48 466 202 HOH HOH . H 3 HOH C 49 467 203 HOH HOH . H 3 HOH C 50 468 206 HOH HOH . H 3 HOH C 51 469 217 HOH HOH . H 3 HOH C 52 470 219 HOH HOH . H 3 HOH C 53 471 227 HOH HOH . H 3 HOH C 54 472 237 HOH HOH . H 3 HOH C 55 473 238 HOH HOH . H 3 HOH C 56 474 245 HOH HOH . I 3 HOH D 1 419 2 HOH HOH . I 3 HOH D 2 420 6 HOH HOH . I 3 HOH D 3 421 10 HOH HOH . I 3 HOH D 4 422 12 HOH HOH . I 3 HOH D 5 423 15 HOH HOH . I 3 HOH D 6 424 20 HOH HOH . I 3 HOH D 7 425 29 HOH HOH . I 3 HOH D 8 426 32 HOH HOH . I 3 HOH D 9 427 33 HOH HOH . I 3 HOH D 10 428 40 HOH HOH . I 3 HOH D 11 429 42 HOH HOH . I 3 HOH D 12 430 45 HOH HOH . I 3 HOH D 13 431 48 HOH HOH . I 3 HOH D 14 432 51 HOH HOH . I 3 HOH D 15 433 57 HOH HOH . I 3 HOH D 16 434 63 HOH HOH . I 3 HOH D 17 435 73 HOH HOH . I 3 HOH D 18 436 81 HOH HOH . I 3 HOH D 19 437 84 HOH HOH . I 3 HOH D 20 438 89 HOH HOH . I 3 HOH D 21 439 91 HOH HOH . I 3 HOH D 22 440 99 HOH HOH . I 3 HOH D 23 441 100 HOH HOH . I 3 HOH D 24 442 104 HOH HOH . I 3 HOH D 25 443 105 HOH HOH . I 3 HOH D 26 444 108 HOH HOH . I 3 HOH D 27 445 111 HOH HOH . I 3 HOH D 28 446 114 HOH HOH . I 3 HOH D 29 447 116 HOH HOH . I 3 HOH D 30 448 123 HOH HOH . I 3 HOH D 31 449 127 HOH HOH . I 3 HOH D 32 450 130 HOH HOH . I 3 HOH D 33 451 135 HOH HOH . I 3 HOH D 34 452 142 HOH HOH . I 3 HOH D 35 453 150 HOH HOH . I 3 HOH D 36 454 151 HOH HOH . I 3 HOH D 37 455 152 HOH HOH . I 3 HOH D 38 456 153 HOH HOH . I 3 HOH D 39 457 154 HOH HOH . I 3 HOH D 40 458 155 HOH HOH . I 3 HOH D 41 459 158 HOH HOH . I 3 HOH D 42 460 162 HOH HOH . I 3 HOH D 43 461 167 HOH HOH . I 3 HOH D 44 462 171 HOH HOH . I 3 HOH D 45 463 172 HOH HOH . I 3 HOH D 46 464 174 HOH HOH . I 3 HOH D 47 465 177 HOH HOH . I 3 HOH D 48 466 183 HOH HOH . I 3 HOH D 49 467 184 HOH HOH . I 3 HOH D 50 468 193 HOH HOH . I 3 HOH D 51 469 204 HOH HOH . I 3 HOH D 52 470 205 HOH HOH . I 3 HOH D 53 471 207 HOH HOH . I 3 HOH D 54 472 210 HOH HOH . I 3 HOH D 55 473 214 HOH HOH . I 3 HOH D 56 474 215 HOH HOH . I 3 HOH D 57 475 218 HOH HOH . I 3 HOH D 58 476 221 HOH HOH . I 3 HOH D 59 477 225 HOH HOH . I 3 HOH D 60 478 229 HOH HOH . I 3 HOH D 61 479 231 HOH HOH . I 3 HOH D 62 480 233 HOH HOH . I 3 HOH D 63 481 239 HOH HOH . I 3 HOH D 64 482 243 HOH HOH . I 3 HOH D 65 483 244 HOH HOH . I 3 HOH D 66 484 246 HOH HOH . I 3 HOH D 67 485 259 HOH HOH . I 3 HOH D 68 486 261 HOH HOH . I 3 HOH D 69 487 262 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.374 _atom_site.Cartn_y 3.82 _atom_site.Cartn_z 13.309 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 419 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #