data_3V12 # _model_server_result.job_id 1LNywrcszh4UmqYsz0-apw _model_server_result.datetime_utc '2024-11-07 12:50:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v12 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 3V12 # _exptl.entry_id 3V12 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3V12 _cell.length_a 54.288 _cell.length_b 54.288 _cell.length_c 136.906 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc5 B CA CA . A CA 301 1_555 G O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc6 B CA CA . A CA 301 1_555 G O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3V12 _atom_sites.fract_transf_matrix[1][1] 0.01842 _atom_sites.fract_transf_matrix[1][2] 0.010635 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 480 CA CA . C 3 PMJ A 1 302 481 PMJ CJ6 . D 4 SO4 A 1 303 482 SO4 SO4 . E 4 SO4 A 1 304 483 SO4 SO4 . F 5 GOL A 1 305 484 GOL GOL . G 6 HOH A 1 401 1000 HOH HOH . G 6 HOH A 2 402 1001 HOH HOH . G 6 HOH A 3 403 1002 HOH HOH . G 6 HOH A 4 404 1003 HOH HOH . G 6 HOH A 5 405 1004 HOH HOH . G 6 HOH A 6 406 1005 HOH HOH . G 6 HOH A 7 407 1006 HOH HOH . G 6 HOH A 8 408 1007 HOH HOH . G 6 HOH A 9 409 1008 HOH HOH . G 6 HOH A 10 410 1009 HOH HOH . G 6 HOH A 11 411 1010 HOH HOH . G 6 HOH A 12 412 1011 HOH HOH . G 6 HOH A 13 413 1012 HOH HOH . G 6 HOH A 14 414 1013 HOH HOH . G 6 HOH A 15 415 1014 HOH HOH . G 6 HOH A 16 416 1015 HOH HOH . G 6 HOH A 17 417 1016 HOH HOH . G 6 HOH A 18 418 1017 HOH HOH . G 6 HOH A 19 419 1018 HOH HOH . G 6 HOH A 20 420 1019 HOH HOH . G 6 HOH A 21 421 1020 HOH HOH . G 6 HOH A 22 422 1021 HOH HOH . G 6 HOH A 23 423 1022 HOH HOH . G 6 HOH A 24 424 1023 HOH HOH . G 6 HOH A 25 425 1024 HOH HOH . G 6 HOH A 26 426 1025 HOH HOH . G 6 HOH A 27 427 1026 HOH HOH . G 6 HOH A 28 428 1027 HOH HOH . G 6 HOH A 29 429 1028 HOH HOH . G 6 HOH A 30 430 1029 HOH HOH . G 6 HOH A 31 431 1030 HOH HOH . G 6 HOH A 32 432 1031 HOH HOH . G 6 HOH A 33 433 1032 HOH HOH . G 6 HOH A 34 434 1033 HOH HOH . G 6 HOH A 35 435 1034 HOH HOH . G 6 HOH A 36 436 1035 HOH HOH . G 6 HOH A 37 437 1036 HOH HOH . G 6 HOH A 38 438 1037 HOH HOH . G 6 HOH A 39 439 1038 HOH HOH . G 6 HOH A 40 440 1039 HOH HOH . G 6 HOH A 41 441 1040 HOH HOH . G 6 HOH A 42 442 1041 HOH HOH . G 6 HOH A 43 443 1042 HOH HOH . G 6 HOH A 44 444 1043 HOH HOH . G 6 HOH A 45 445 1044 HOH HOH . G 6 HOH A 46 446 1045 HOH HOH . G 6 HOH A 47 447 1046 HOH HOH . G 6 HOH A 48 448 1047 HOH HOH . G 6 HOH A 49 449 1048 HOH HOH . G 6 HOH A 50 450 1049 HOH HOH . G 6 HOH A 51 451 1050 HOH HOH . G 6 HOH A 52 452 1051 HOH HOH . G 6 HOH A 53 453 1052 HOH HOH . G 6 HOH A 54 454 1053 HOH HOH . G 6 HOH A 55 455 1054 HOH HOH . G 6 HOH A 56 456 1055 HOH HOH . G 6 HOH A 57 457 1056 HOH HOH . G 6 HOH A 58 458 1057 HOH HOH . G 6 HOH A 59 459 1058 HOH HOH . G 6 HOH A 60 460 1059 HOH HOH . G 6 HOH A 61 461 1060 HOH HOH . G 6 HOH A 62 462 1061 HOH HOH . G 6 HOH A 63 463 1062 HOH HOH . G 6 HOH A 64 464 1063 HOH HOH . G 6 HOH A 65 465 1064 HOH HOH . G 6 HOH A 66 466 1065 HOH HOH . G 6 HOH A 67 467 1066 HOH HOH . G 6 HOH A 68 468 1067 HOH HOH . G 6 HOH A 69 469 1068 HOH HOH . G 6 HOH A 70 470 1069 HOH HOH . G 6 HOH A 71 471 1070 HOH HOH . G 6 HOH A 72 472 1071 HOH HOH . G 6 HOH A 73 473 1072 HOH HOH . G 6 HOH A 74 474 1073 HOH HOH . G 6 HOH A 75 475 1074 HOH HOH . G 6 HOH A 76 476 1075 HOH HOH . G 6 HOH A 77 477 1076 HOH HOH . G 6 HOH A 78 478 1077 HOH HOH . G 6 HOH A 79 479 1078 HOH HOH . G 6 HOH A 80 480 1079 HOH HOH . G 6 HOH A 81 481 1080 HOH HOH . G 6 HOH A 82 482 1081 HOH HOH . G 6 HOH A 83 483 1082 HOH HOH . G 6 HOH A 84 484 1083 HOH HOH . G 6 HOH A 85 485 1084 HOH HOH . G 6 HOH A 86 486 1085 HOH HOH . G 6 HOH A 87 487 1086 HOH HOH . G 6 HOH A 88 488 1087 HOH HOH . G 6 HOH A 89 489 1088 HOH HOH . G 6 HOH A 90 490 1089 HOH HOH . G 6 HOH A 91 491 1090 HOH HOH . G 6 HOH A 92 492 1091 HOH HOH . G 6 HOH A 93 493 1092 HOH HOH . G 6 HOH A 94 494 1093 HOH HOH . G 6 HOH A 95 495 1094 HOH HOH . G 6 HOH A 96 496 1095 HOH HOH . G 6 HOH A 97 497 1096 HOH HOH . G 6 HOH A 98 498 1097 HOH HOH . G 6 HOH A 99 499 1098 HOH HOH . G 6 HOH A 100 500 1099 HOH HOH . G 6 HOH A 101 501 1100 HOH HOH . G 6 HOH A 102 502 1101 HOH HOH . G 6 HOH A 103 503 1102 HOH HOH . G 6 HOH A 104 504 1103 HOH HOH . G 6 HOH A 105 505 1104 HOH HOH . G 6 HOH A 106 506 1105 HOH HOH . G 6 HOH A 107 507 1106 HOH HOH . G 6 HOH A 108 508 1107 HOH HOH . G 6 HOH A 109 509 1108 HOH HOH . G 6 HOH A 110 510 1109 HOH HOH . G 6 HOH A 111 511 1110 HOH HOH . G 6 HOH A 112 512 1111 HOH HOH . G 6 HOH A 113 513 1112 HOH HOH . G 6 HOH A 114 514 1113 HOH HOH . G 6 HOH A 115 515 1114 HOH HOH . G 6 HOH A 116 516 1115 HOH HOH . G 6 HOH A 117 517 1116 HOH HOH . G 6 HOH A 118 518 1117 HOH HOH . G 6 HOH A 119 519 1118 HOH HOH . G 6 HOH A 120 520 1119 HOH HOH . G 6 HOH A 121 521 1120 HOH HOH . G 6 HOH A 122 522 1121 HOH HOH . G 6 HOH A 123 523 1122 HOH HOH . G 6 HOH A 124 524 1123 HOH HOH . G 6 HOH A 125 525 1124 HOH HOH . G 6 HOH A 126 526 1125 HOH HOH . G 6 HOH A 127 527 1126 HOH HOH . G 6 HOH A 128 528 1127 HOH HOH . G 6 HOH A 129 529 1128 HOH HOH . G 6 HOH A 130 530 1129 HOH HOH . G 6 HOH A 131 531 1130 HOH HOH . G 6 HOH A 132 532 1131 HOH HOH . G 6 HOH A 133 533 1132 HOH HOH . G 6 HOH A 134 534 1133 HOH HOH . G 6 HOH A 135 535 1134 HOH HOH . G 6 HOH A 136 536 1135 HOH HOH . G 6 HOH A 137 537 1136 HOH HOH . G 6 HOH A 138 538 1137 HOH HOH . G 6 HOH A 139 539 1138 HOH HOH . G 6 HOH A 140 540 1139 HOH HOH . G 6 HOH A 141 541 1140 HOH HOH . G 6 HOH A 142 542 1141 HOH HOH . G 6 HOH A 143 543 1142 HOH HOH . G 6 HOH A 144 544 1143 HOH HOH . G 6 HOH A 145 545 1144 HOH HOH . G 6 HOH A 146 546 1145 HOH HOH . G 6 HOH A 147 547 1146 HOH HOH . G 6 HOH A 148 548 1147 HOH HOH . G 6 HOH A 149 549 1149 HOH HOH . G 6 HOH A 150 550 1150 HOH HOH . G 6 HOH A 151 551 1151 HOH HOH . G 6 HOH A 152 552 1152 HOH HOH . G 6 HOH A 153 553 1153 HOH HOH . G 6 HOH A 154 554 1154 HOH HOH . G 6 HOH A 155 555 1155 HOH HOH . G 6 HOH A 156 556 1156 HOH HOH . G 6 HOH A 157 557 1157 HOH HOH . G 6 HOH A 158 558 1158 HOH HOH . G 6 HOH A 159 559 1159 HOH HOH . G 6 HOH A 160 560 1160 HOH HOH . G 6 HOH A 161 561 1161 HOH HOH . G 6 HOH A 162 562 1162 HOH HOH . G 6 HOH A 163 563 1163 HOH HOH . G 6 HOH A 164 564 1164 HOH HOH . G 6 HOH A 165 565 1165 HOH HOH . G 6 HOH A 166 566 1166 HOH HOH . G 6 HOH A 167 567 1167 HOH HOH . G 6 HOH A 168 568 1168 HOH HOH . G 6 HOH A 169 569 1169 HOH HOH . G 6 HOH A 170 570 1170 HOH HOH . G 6 HOH A 171 571 1171 HOH HOH . G 6 HOH A 172 572 1172 HOH HOH . G 6 HOH A 173 573 1173 HOH HOH . G 6 HOH A 174 574 1174 HOH HOH . G 6 HOH A 175 575 1175 HOH HOH . G 6 HOH A 176 576 1176 HOH HOH . G 6 HOH A 177 577 1177 HOH HOH . G 6 HOH A 178 578 1178 HOH HOH . G 6 HOH A 179 579 1179 HOH HOH . G 6 HOH A 180 580 1180 HOH HOH . G 6 HOH A 181 581 1181 HOH HOH . G 6 HOH A 182 582 1182 HOH HOH . G 6 HOH A 183 583 1183 HOH HOH . G 6 HOH A 184 584 1184 HOH HOH . G 6 HOH A 185 585 1185 HOH HOH . G 6 HOH A 186 586 1186 HOH HOH . G 6 HOH A 187 587 1187 HOH HOH . G 6 HOH A 188 588 1188 HOH HOH . G 6 HOH A 189 589 1189 HOH HOH . G 6 HOH A 190 590 1190 HOH HOH . G 6 HOH A 191 591 1191 HOH HOH . G 6 HOH A 192 592 1192 HOH HOH . G 6 HOH A 193 593 1193 HOH HOH . G 6 HOH A 194 594 1194 HOH HOH . G 6 HOH A 195 595 1195 HOH HOH . G 6 HOH A 196 596 1196 HOH HOH . G 6 HOH A 197 597 1197 HOH HOH . G 6 HOH A 198 598 1198 HOH HOH . G 6 HOH A 199 599 1199 HOH HOH . G 6 HOH A 200 600 1200 HOH HOH . G 6 HOH A 201 601 1201 HOH HOH . G 6 HOH A 202 602 1202 HOH HOH . G 6 HOH A 203 603 1203 HOH HOH . G 6 HOH A 204 604 1204 HOH HOH . G 6 HOH A 205 605 1205 HOH HOH . G 6 HOH A 206 606 1206 HOH HOH . G 6 HOH A 207 607 1207 HOH HOH . G 6 HOH A 208 608 1208 HOH HOH . G 6 HOH A 209 609 1209 HOH HOH . G 6 HOH A 210 610 1210 HOH HOH . G 6 HOH A 211 611 1211 HOH HOH . G 6 HOH A 212 612 1212 HOH HOH . G 6 HOH A 213 613 1213 HOH HOH . G 6 HOH A 214 614 1214 HOH HOH . G 6 HOH A 215 615 1215 HOH HOH . G 6 HOH A 216 616 1216 HOH HOH . G 6 HOH A 217 617 1217 HOH HOH . G 6 HOH A 218 618 1218 HOH HOH . G 6 HOH A 219 619 1219 HOH HOH . G 6 HOH A 220 620 1220 HOH HOH . G 6 HOH A 221 621 1221 HOH HOH . G 6 HOH A 222 622 1222 HOH HOH . G 6 HOH A 223 623 1223 HOH HOH . G 6 HOH A 224 624 1224 HOH HOH . G 6 HOH A 225 625 1225 HOH HOH . G 6 HOH A 226 626 1226 HOH HOH . G 6 HOH A 227 627 1227 HOH HOH . G 6 HOH A 228 628 1228 HOH HOH . G 6 HOH A 229 629 1229 HOH HOH . G 6 HOH A 230 630 1230 HOH HOH . G 6 HOH A 231 631 1231 HOH HOH . G 6 HOH A 232 632 1232 HOH HOH . G 6 HOH A 233 633 1233 HOH HOH . G 6 HOH A 234 634 1234 HOH HOH . G 6 HOH A 235 635 1235 HOH HOH . G 6 HOH A 236 636 1236 HOH HOH . G 6 HOH A 237 637 1237 HOH HOH . G 6 HOH A 238 638 1238 HOH HOH . G 6 HOH A 239 639 1239 HOH HOH . G 6 HOH A 240 640 1240 HOH HOH . G 6 HOH A 241 641 1241 HOH HOH . G 6 HOH A 242 642 1242 HOH HOH . G 6 HOH A 243 643 1243 HOH HOH . G 6 HOH A 244 644 1244 HOH HOH . G 6 HOH A 245 645 1245 HOH HOH . G 6 HOH A 246 646 1246 HOH HOH . G 6 HOH A 247 647 1247 HOH HOH . G 6 HOH A 248 648 1248 HOH HOH . G 6 HOH A 249 649 1249 HOH HOH . G 6 HOH A 250 650 1250 HOH HOH . G 6 HOH A 251 651 1251 HOH HOH . G 6 HOH A 252 652 1252 HOH HOH . G 6 HOH A 253 653 1253 HOH HOH . G 6 HOH A 254 654 1254 HOH HOH . G 6 HOH A 255 655 1255 HOH HOH . G 6 HOH A 256 656 1256 HOH HOH . G 6 HOH A 257 657 1257 HOH HOH . G 6 HOH A 258 658 1258 HOH HOH . G 6 HOH A 259 659 1259 HOH HOH . G 6 HOH A 260 660 1260 HOH HOH . G 6 HOH A 261 661 1261 HOH HOH . G 6 HOH A 262 662 1262 HOH HOH . G 6 HOH A 263 663 1263 HOH HOH . G 6 HOH A 264 664 1264 HOH HOH . G 6 HOH A 265 665 1265 HOH HOH . G 6 HOH A 266 666 1266 HOH HOH . G 6 HOH A 267 667 1267 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -35.302 _atom_site.Cartn_y 14.464 _atom_site.Cartn_z 28.205 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #