data_3V1F # _model_server_result.job_id mON7CauVBwJpiTl01iKQDQ _model_server_result.datetime_utc '2024-11-13 04:02:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v1f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":47}' # _entry.id 3V1F # _exptl.entry_id 3V1F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3V1F _cell.length_a 37.241 _cell.length_b 46.528 _cell.length_c 62.277 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V1F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 12 1_555 E ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 A NE2 HIS 18 A HIS 16 1_555 E ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc3 A OE2 GLU 37 A GLU 35 1_555 C ZN ZN . A ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc4 A ND1 HIS 41 A HIS 39 1_555 C ZN ZN . A ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 C ZN ZN . A ZN 704 1_555 B NE2 HIS 14 B HIS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc6 C ZN ZN . A ZN 704 1_555 B NE2 HIS 18 B HIS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc7 B OE2 GLU 37 B GLU 35 1_555 E ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc8 B ND1 HIS 41 B HIS 39 1_555 E ZN ZN . B ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3V1F _atom_sites.fract_transf_matrix[1][1] 0.026852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 704 704 ZN ZN . D 3 EDO A 1 47 1 EDO EDO . E 2 ZN B 1 703 703 ZN ZN . F 4 ACT B 1 47 1 ACT ACT . G 5 HOH A 1 48 48 HOH HOH . G 5 HOH A 2 49 49 HOH HOH . G 5 HOH A 3 50 50 HOH HOH . G 5 HOH A 4 51 2 HOH HOH . G 5 HOH A 5 52 52 HOH HOH . G 5 HOH A 6 53 3 HOH HOH . G 5 HOH A 7 54 7 HOH HOH . G 5 HOH A 8 55 8 HOH HOH . G 5 HOH A 9 56 56 HOH HOH . G 5 HOH A 10 57 14 HOH HOH . G 5 HOH A 11 58 16 HOH HOH . G 5 HOH A 12 59 17 HOH HOH . G 5 HOH A 13 60 19 HOH HOH . G 5 HOH A 14 61 61 HOH HOH . G 5 HOH A 15 62 20 HOH HOH . G 5 HOH A 16 63 24 HOH HOH . G 5 HOH A 17 64 64 HOH HOH . G 5 HOH A 18 65 25 HOH HOH . G 5 HOH A 19 66 66 HOH HOH . G 5 HOH A 20 67 26 HOH HOH . G 5 HOH A 21 68 68 HOH HOH . G 5 HOH A 22 69 28 HOH HOH . G 5 HOH A 23 70 70 HOH HOH . G 5 HOH A 24 71 29 HOH HOH . G 5 HOH A 25 72 31 HOH HOH . G 5 HOH A 26 73 73 HOH HOH . G 5 HOH A 27 74 32 HOH HOH . G 5 HOH A 28 75 35 HOH HOH . G 5 HOH A 29 76 36 HOH HOH . G 5 HOH A 30 77 38 HOH HOH . G 5 HOH A 31 78 39 HOH HOH . G 5 HOH A 32 79 40 HOH HOH . G 5 HOH A 33 80 80 HOH HOH . G 5 HOH A 34 81 81 HOH HOH . G 5 HOH A 35 82 41 HOH HOH . G 5 HOH A 36 83 83 HOH HOH . G 5 HOH A 37 84 42 HOH HOH . G 5 HOH A 38 85 47 HOH HOH . G 5 HOH A 39 86 86 HOH HOH . G 5 HOH A 40 90 90 HOH HOH . G 5 HOH A 41 91 91 HOH HOH . G 5 HOH A 42 94 94 HOH HOH . G 5 HOH A 43 96 96 HOH HOH . G 5 HOH A 44 98 98 HOH HOH . G 5 HOH A 45 103 103 HOH HOH . G 5 HOH A 46 105 105 HOH HOH . G 5 HOH A 47 106 106 HOH HOH . G 5 HOH A 48 109 109 HOH HOH . G 5 HOH A 49 117 117 HOH HOH . G 5 HOH A 50 121 121 HOH HOH . G 5 HOH A 51 123 123 HOH HOH . G 5 HOH A 52 126 126 HOH HOH . G 5 HOH A 53 130 130 HOH HOH . G 5 HOH A 54 133 133 HOH HOH . G 5 HOH A 55 134 134 HOH HOH . G 5 HOH A 56 138 138 HOH HOH . G 5 HOH A 57 146 146 HOH HOH . G 5 HOH A 58 147 147 HOH HOH . G 5 HOH A 59 151 151 HOH HOH . G 5 HOH A 60 158 158 HOH HOH . G 5 HOH A 61 159 159 HOH HOH . G 5 HOH A 62 163 163 HOH HOH . G 5 HOH A 63 165 165 HOH HOH . G 5 HOH A 64 167 167 HOH HOH . G 5 HOH A 65 170 170 HOH HOH . G 5 HOH A 66 171 171 HOH HOH . G 5 HOH A 67 181 181 HOH HOH . G 5 HOH A 68 183 183 HOH HOH . G 5 HOH A 69 185 185 HOH HOH . G 5 HOH A 70 189 189 HOH HOH . H 5 HOH B 1 48 1 HOH HOH . H 5 HOH B 2 49 4 HOH HOH . H 5 HOH B 3 50 5 HOH HOH . H 5 HOH B 4 51 51 HOH HOH . H 5 HOH B 5 52 6 HOH HOH . H 5 HOH B 6 53 53 HOH HOH . H 5 HOH B 7 54 54 HOH HOH . H 5 HOH B 8 55 55 HOH HOH . H 5 HOH B 9 56 9 HOH HOH . H 5 HOH B 10 57 57 HOH HOH . H 5 HOH B 11 58 58 HOH HOH . H 5 HOH B 12 59 59 HOH HOH . H 5 HOH B 13 60 60 HOH HOH . H 5 HOH B 14 61 10 HOH HOH . H 5 HOH B 15 62 62 HOH HOH . H 5 HOH B 16 63 63 HOH HOH . H 5 HOH B 17 64 11 HOH HOH . H 5 HOH B 18 65 65 HOH HOH . H 5 HOH B 19 66 13 HOH HOH . H 5 HOH B 20 67 15 HOH HOH . H 5 HOH B 21 68 18 HOH HOH . H 5 HOH B 22 69 69 HOH HOH . H 5 HOH B 23 70 21 HOH HOH . H 5 HOH B 24 71 71 HOH HOH . H 5 HOH B 25 72 22 HOH HOH . H 5 HOH B 26 73 23 HOH HOH . H 5 HOH B 27 74 74 HOH HOH . H 5 HOH B 28 75 75 HOH HOH . H 5 HOH B 29 76 76 HOH HOH . H 5 HOH B 30 77 77 HOH HOH . H 5 HOH B 31 78 78 HOH HOH . H 5 HOH B 32 79 79 HOH HOH . H 5 HOH B 33 80 27 HOH HOH . H 5 HOH B 34 81 30 HOH HOH . H 5 HOH B 35 82 33 HOH HOH . H 5 HOH B 36 83 34 HOH HOH . H 5 HOH B 37 84 84 HOH HOH . H 5 HOH B 38 85 85 HOH HOH . H 5 HOH B 39 86 37 HOH HOH . H 5 HOH B 40 87 87 HOH HOH . H 5 HOH B 41 88 88 HOH HOH . H 5 HOH B 42 89 89 HOH HOH . H 5 HOH B 43 90 43 HOH HOH . H 5 HOH B 44 91 44 HOH HOH . H 5 HOH B 45 92 92 HOH HOH . H 5 HOH B 46 93 45 HOH HOH . H 5 HOH B 47 94 46 HOH HOH . H 5 HOH B 48 95 95 HOH HOH . H 5 HOH B 49 99 99 HOH HOH . H 5 HOH B 50 100 100 HOH HOH . H 5 HOH B 51 104 104 HOH HOH . H 5 HOH B 52 108 108 HOH HOH . H 5 HOH B 53 112 112 HOH HOH . H 5 HOH B 54 113 113 HOH HOH . H 5 HOH B 55 116 116 HOH HOH . H 5 HOH B 56 118 118 HOH HOH . H 5 HOH B 57 119 119 HOH HOH . H 5 HOH B 58 120 120 HOH HOH . H 5 HOH B 59 129 129 HOH HOH . H 5 HOH B 60 132 132 HOH HOH . H 5 HOH B 61 136 136 HOH HOH . H 5 HOH B 62 142 142 HOH HOH . H 5 HOH B 63 144 144 HOH HOH . H 5 HOH B 64 150 150 HOH HOH . H 5 HOH B 65 152 152 HOH HOH . H 5 HOH B 66 154 154 HOH HOH . H 5 HOH B 67 156 156 HOH HOH . H 5 HOH B 68 160 160 HOH HOH . H 5 HOH B 69 162 162 HOH HOH . H 5 HOH B 70 164 164 HOH HOH . H 5 HOH B 71 166 166 HOH HOH . H 5 HOH B 72 172 172 HOH HOH . H 5 HOH B 73 182 182 HOH HOH . H 5 HOH B 74 184 184 HOH HOH . H 5 HOH B 75 186 186 HOH HOH . H 5 HOH B 76 187 187 HOH HOH . H 5 HOH B 77 188 188 HOH HOH . H 5 HOH B 78 190 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . A . F 4 19.087 22.833 44.96 0.48 21.59 ? C ACT 47 B 1 HETATM 2 C C ACT . B . F 4 19.599 22.875 44.333 0.52 22.01 ? C ACT 47 B 1 HETATM 3 O O ACT . A . F 4 18.541 22.314 45.987 0.48 18.35 ? O ACT 47 B 1 HETATM 4 O O ACT . B . F 4 19.056 23.325 43.314 0.52 16.77 ? O ACT 47 B 1 HETATM 5 O OXT ACT . A . F 4 18.294 23.461 44.237 0.48 18.46 ? OXT ACT 47 B 1 HETATM 6 O OXT ACT . B . F 4 20.844 22.69 44.238 0.52 20.99 ? OXT ACT 47 B 1 HETATM 7 C CH3 ACT . A . F 4 20.536 22.719 44.538 0.48 27.93 ? CH3 ACT 47 B 1 HETATM 8 C CH3 ACT . B . F 4 18.773 22.565 45.558 0.52 29.03 ? CH3 ACT 47 B 1 HETATM 9 H H1 ACT . A . F 4 20.682 23.242 43.593 0.48 33.49 ? H1 ACT 47 B 1 HETATM 10 H H1 ACT . B . F 4 19.418 22.161 46.339 0.52 34.8 ? H1 ACT 47 B 1 HETATM 11 H H2 ACT . A . F 4 20.797 21.668 44.416 0.48 33.49 ? H2 ACT 47 B 1 HETATM 12 H H2 ACT . B . F 4 18.007 21.832 45.305 0.52 34.8 ? H2 ACT 47 B 1 HETATM 13 H H3 ACT . A . F 4 21.173 23.165 45.302 0.48 33.49 ? H3 ACT 47 B 1 HETATM 14 H H3 ACT . B . F 4 18.298 23.478 45.916 0.52 34.8 ? H3 ACT 47 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #