data_3V1S # _model_server_result.job_id XVfXJ8wJssw3P9DHFCneyg _model_server_result.datetime_utc '2024-10-19 17:46:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 3V1S # _exptl.entry_id 3V1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.216 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(1H-indol-1-yl)ethanamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3V1S _cell.length_a 150.976 _cell.length_b 150.976 _cell.length_c 121.471 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 67 A CYS 89 1_555 A SG CYS 79 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf2 B SG CYS 67 B CYS 89 1_555 B SG CYS 79 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C10 H12 N2' _chem_comp.formula_weight 160.216 _chem_comp.id 0LH _chem_comp.mon_nstd_flag . _chem_comp.name 2-(1H-indol-1-yl)ethanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI CAH 0LH sing 1 n n CAI NAL 0LH sing 2 n n CAH NAA 0LH sing 3 n n CAE CAC 0LH doub 4 n y CAE CAK 0LH sing 5 n y NAL CAK 0LH sing 6 n y NAL CAG 0LH sing 7 n y CAC CAB 0LH sing 8 n y CAK CAJ 0LH doub 9 n y CAG CAF 0LH doub 10 n y CAB CAD 0LH doub 11 n y CAJ CAF 0LH sing 12 n y CAJ CAD 0LH sing 13 n y CAG H1 0LH sing 14 n n CAF H2 0LH sing 15 n n CAD H3 0LH sing 16 n n CAB H4 0LH sing 17 n n CAC H5 0LH sing 18 n n CAE H6 0LH sing 19 n n CAI H7 0LH sing 20 n n CAI H8 0LH sing 21 n n CAH H9 0LH sing 22 n n CAH H10 0LH sing 23 n n NAA H11 0LH sing 24 n n NAA H12 0LH sing 25 n n # _atom_sites.entry_id 3V1S _atom_sites.fract_transf_matrix[1][1] 0.006624 _atom_sites.fract_transf_matrix[1][2] 0.003824 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0LH A 1 401 1 0LH DRG . D 2 0LH B 1 401 1 0LH DRG . E 3 HOH A 1 501 1 HOH HOH . E 3 HOH A 2 502 2 HOH HOH . E 3 HOH A 3 503 3 HOH HOH . E 3 HOH A 4 504 4 HOH HOH . E 3 HOH A 5 505 5 HOH HOH . E 3 HOH A 6 506 6 HOH HOH . E 3 HOH A 7 507 9 HOH HOH . E 3 HOH A 8 508 10 HOH HOH . E 3 HOH A 9 509 11 HOH HOH . E 3 HOH A 10 510 12 HOH HOH . E 3 HOH A 11 511 13 HOH HOH . E 3 HOH A 12 512 14 HOH HOH . E 3 HOH A 13 513 15 HOH HOH . E 3 HOH A 14 514 16 HOH HOH . E 3 HOH A 15 515 18 HOH HOH . E 3 HOH A 16 516 19 HOH HOH . E 3 HOH A 17 517 20 HOH HOH . E 3 HOH A 18 518 22 HOH HOH . E 3 HOH A 19 519 23 HOH HOH . E 3 HOH A 20 520 24 HOH HOH . E 3 HOH A 21 521 25 HOH HOH . E 3 HOH A 22 522 26 HOH HOH . E 3 HOH A 23 523 27 HOH HOH . E 3 HOH A 24 524 29 HOH HOH . E 3 HOH A 25 525 30 HOH HOH . E 3 HOH A 26 526 31 HOH HOH . E 3 HOH A 27 527 33 HOH HOH . E 3 HOH A 28 528 34 HOH HOH . E 3 HOH A 29 529 36 HOH HOH . E 3 HOH A 30 530 38 HOH HOH . E 3 HOH A 31 531 39 HOH HOH . E 3 HOH A 32 532 41 HOH HOH . E 3 HOH A 33 533 42 HOH HOH . E 3 HOH A 34 534 43 HOH HOH . E 3 HOH A 35 535 44 HOH HOH . E 3 HOH A 36 536 45 HOH HOH . E 3 HOH A 37 537 47 HOH HOH . E 3 HOH A 38 538 48 HOH HOH . E 3 HOH A 39 539 51 HOH HOH . E 3 HOH A 40 540 52 HOH HOH . E 3 HOH A 41 541 53 HOH HOH . E 3 HOH A 42 542 56 HOH HOH . E 3 HOH A 43 543 57 HOH HOH . E 3 HOH A 44 544 59 HOH HOH . E 3 HOH A 45 545 60 HOH HOH . E 3 HOH A 46 546 61 HOH HOH . E 3 HOH A 47 547 62 HOH HOH . E 3 HOH A 48 548 63 HOH HOH . E 3 HOH A 49 549 64 HOH HOH . E 3 HOH A 50 550 65 HOH HOH . E 3 HOH A 51 551 66 HOH HOH . E 3 HOH A 52 552 67 HOH HOH . E 3 HOH A 53 553 68 HOH HOH . E 3 HOH A 54 554 69 HOH HOH . E 3 HOH A 55 555 70 HOH HOH . E 3 HOH A 56 556 71 HOH HOH . E 3 HOH A 57 557 72 HOH HOH . E 3 HOH A 58 558 73 HOH HOH . E 3 HOH A 59 559 75 HOH HOH . E 3 HOH A 60 560 76 HOH HOH . E 3 HOH A 61 561 77 HOH HOH . E 3 HOH A 62 562 79 HOH HOH . E 3 HOH A 63 563 80 HOH HOH . E 3 HOH A 64 564 82 HOH HOH . E 3 HOH A 65 565 83 HOH HOH . E 3 HOH A 66 566 86 HOH HOH . E 3 HOH A 67 567 87 HOH HOH . E 3 HOH A 68 568 88 HOH HOH . E 3 HOH A 69 569 90 HOH HOH . E 3 HOH A 70 570 92 HOH HOH . E 3 HOH A 71 571 93 HOH HOH . E 3 HOH A 72 572 94 HOH HOH . E 3 HOH A 73 573 96 HOH HOH . E 3 HOH A 74 574 97 HOH HOH . E 3 HOH A 75 575 98 HOH HOH . E 3 HOH A 76 576 99 HOH HOH . E 3 HOH A 77 577 100 HOH HOH . E 3 HOH A 78 578 101 HOH HOH . E 3 HOH A 79 579 102 HOH HOH . E 3 HOH A 80 580 103 HOH HOH . E 3 HOH A 81 581 107 HOH HOH . E 3 HOH A 82 582 108 HOH HOH . E 3 HOH A 83 583 109 HOH HOH . E 3 HOH A 84 584 110 HOH HOH . E 3 HOH A 85 585 111 HOH HOH . E 3 HOH A 86 586 112 HOH HOH . E 3 HOH A 87 587 113 HOH HOH . E 3 HOH A 88 588 114 HOH HOH . E 3 HOH A 89 589 116 HOH HOH . E 3 HOH A 90 590 117 HOH HOH . E 3 HOH A 91 591 119 HOH HOH . E 3 HOH A 92 592 120 HOH HOH . E 3 HOH A 93 593 123 HOH HOH . E 3 HOH A 94 594 124 HOH HOH . E 3 HOH A 95 595 125 HOH HOH . E 3 HOH A 96 596 126 HOH HOH . E 3 HOH A 97 597 128 HOH HOH . E 3 HOH A 98 598 129 HOH HOH . E 3 HOH A 99 599 130 HOH HOH . E 3 HOH A 100 600 131 HOH HOH . E 3 HOH A 101 601 132 HOH HOH . E 3 HOH A 102 602 133 HOH HOH . E 3 HOH A 103 603 136 HOH HOH . E 3 HOH A 104 604 137 HOH HOH . E 3 HOH A 105 605 139 HOH HOH . E 3 HOH A 106 606 140 HOH HOH . E 3 HOH A 107 607 143 HOH HOH . E 3 HOH A 108 608 144 HOH HOH . E 3 HOH A 109 609 145 HOH HOH . E 3 HOH A 110 610 146 HOH HOH . E 3 HOH A 111 611 147 HOH HOH . E 3 HOH A 112 612 148 HOH HOH . E 3 HOH A 113 613 150 HOH HOH . E 3 HOH A 114 614 151 HOH HOH . E 3 HOH A 115 615 152 HOH HOH . E 3 HOH A 116 616 153 HOH HOH . E 3 HOH A 117 617 154 HOH HOH . E 3 HOH A 118 618 157 HOH HOH . E 3 HOH A 119 619 158 HOH HOH . E 3 HOH A 120 620 160 HOH HOH . E 3 HOH A 121 621 161 HOH HOH . E 3 HOH A 122 622 162 HOH HOH . E 3 HOH A 123 623 163 HOH HOH . E 3 HOH A 124 624 164 HOH HOH . E 3 HOH A 125 625 165 HOH HOH . E 3 HOH A 126 626 166 HOH HOH . E 3 HOH A 127 627 167 HOH HOH . E 3 HOH A 128 628 168 HOH HOH . E 3 HOH A 129 629 169 HOH HOH . E 3 HOH A 130 630 171 HOH HOH . E 3 HOH A 131 631 172 HOH HOH . E 3 HOH A 132 632 174 HOH HOH . E 3 HOH A 133 633 175 HOH HOH . E 3 HOH A 134 634 178 HOH HOH . E 3 HOH A 135 635 179 HOH HOH . E 3 HOH A 136 636 180 HOH HOH . E 3 HOH A 137 637 182 HOH HOH . E 3 HOH A 138 638 183 HOH HOH . E 3 HOH A 139 639 184 HOH HOH . E 3 HOH A 140 640 185 HOH HOH . E 3 HOH A 141 641 186 HOH HOH . E 3 HOH A 142 642 187 HOH HOH . E 3 HOH A 143 643 190 HOH HOH . E 3 HOH A 144 644 192 HOH HOH . E 3 HOH A 145 645 194 HOH HOH . E 3 HOH A 146 646 195 HOH HOH . E 3 HOH A 147 647 196 HOH HOH . E 3 HOH A 148 648 197 HOH HOH . E 3 HOH A 149 649 199 HOH HOH . E 3 HOH A 150 650 200 HOH HOH . E 3 HOH A 151 651 201 HOH HOH . E 3 HOH A 152 652 202 HOH HOH . E 3 HOH A 153 653 203 HOH HOH . E 3 HOH A 154 654 204 HOH HOH . E 3 HOH A 155 655 205 HOH HOH . E 3 HOH A 156 656 206 HOH HOH . E 3 HOH A 157 657 210 HOH HOH . E 3 HOH A 158 658 211 HOH HOH . E 3 HOH A 159 659 212 HOH HOH . E 3 HOH A 160 660 213 HOH HOH . E 3 HOH A 161 661 215 HOH HOH . E 3 HOH A 162 662 216 HOH HOH . E 3 HOH A 163 663 217 HOH HOH . E 3 HOH A 164 664 218 HOH HOH . E 3 HOH A 165 665 219 HOH HOH . E 3 HOH A 166 666 221 HOH HOH . E 3 HOH A 167 667 222 HOH HOH . E 3 HOH A 168 668 223 HOH HOH . E 3 HOH A 169 669 225 HOH HOH . E 3 HOH A 170 670 227 HOH HOH . E 3 HOH A 171 671 231 HOH HOH . E 3 HOH A 172 672 233 HOH HOH . E 3 HOH A 173 673 234 HOH HOH . E 3 HOH A 174 674 237 HOH HOH . E 3 HOH A 175 675 238 HOH HOH . E 3 HOH A 176 676 239 HOH HOH . E 3 HOH A 177 677 240 HOH HOH . E 3 HOH A 178 678 244 HOH HOH . E 3 HOH A 179 679 245 HOH HOH . E 3 HOH A 180 680 246 HOH HOH . E 3 HOH A 181 681 247 HOH HOH . E 3 HOH A 182 682 248 HOH HOH . E 3 HOH A 183 683 250 HOH HOH . E 3 HOH A 184 684 251 HOH HOH . F 3 HOH B 1 501 7 HOH HOH . F 3 HOH B 2 502 8 HOH HOH . F 3 HOH B 3 503 17 HOH HOH . F 3 HOH B 4 504 21 HOH HOH . F 3 HOH B 5 505 28 HOH HOH . F 3 HOH B 6 506 32 HOH HOH . F 3 HOH B 7 507 35 HOH HOH . F 3 HOH B 8 508 37 HOH HOH . F 3 HOH B 9 509 40 HOH HOH . F 3 HOH B 10 510 46 HOH HOH . F 3 HOH B 11 511 49 HOH HOH . F 3 HOH B 12 512 50 HOH HOH . F 3 HOH B 13 513 54 HOH HOH . F 3 HOH B 14 514 55 HOH HOH . F 3 HOH B 15 515 58 HOH HOH . F 3 HOH B 16 516 74 HOH HOH . F 3 HOH B 17 517 78 HOH HOH . F 3 HOH B 18 518 81 HOH HOH . F 3 HOH B 19 519 84 HOH HOH . F 3 HOH B 20 520 85 HOH HOH . F 3 HOH B 21 521 89 HOH HOH . F 3 HOH B 22 522 91 HOH HOH . F 3 HOH B 23 523 95 HOH HOH . F 3 HOH B 24 524 104 HOH HOH . F 3 HOH B 25 525 105 HOH HOH . F 3 HOH B 26 526 106 HOH HOH . F 3 HOH B 27 527 115 HOH HOH . F 3 HOH B 28 528 118 HOH HOH . F 3 HOH B 29 529 121 HOH HOH . F 3 HOH B 30 530 122 HOH HOH . F 3 HOH B 31 531 127 HOH HOH . F 3 HOH B 32 532 134 HOH HOH . F 3 HOH B 33 533 135 HOH HOH . F 3 HOH B 34 534 138 HOH HOH . F 3 HOH B 35 535 141 HOH HOH . F 3 HOH B 36 536 142 HOH HOH . F 3 HOH B 37 537 149 HOH HOH . F 3 HOH B 38 538 155 HOH HOH . F 3 HOH B 39 539 156 HOH HOH . F 3 HOH B 40 540 159 HOH HOH . F 3 HOH B 41 541 170 HOH HOH . F 3 HOH B 42 542 173 HOH HOH . F 3 HOH B 43 543 176 HOH HOH . F 3 HOH B 44 544 177 HOH HOH . F 3 HOH B 45 545 181 HOH HOH . F 3 HOH B 46 546 188 HOH HOH . F 3 HOH B 47 547 189 HOH HOH . F 3 HOH B 48 548 191 HOH HOH . F 3 HOH B 49 549 193 HOH HOH . F 3 HOH B 50 550 198 HOH HOH . F 3 HOH B 51 551 207 HOH HOH . F 3 HOH B 52 552 208 HOH HOH . F 3 HOH B 53 553 209 HOH HOH . F 3 HOH B 54 554 214 HOH HOH . F 3 HOH B 55 555 220 HOH HOH . F 3 HOH B 56 556 224 HOH HOH . F 3 HOH B 57 557 226 HOH HOH . F 3 HOH B 58 558 228 HOH HOH . F 3 HOH B 59 559 229 HOH HOH . F 3 HOH B 60 560 230 HOH HOH . F 3 HOH B 61 561 232 HOH HOH . F 3 HOH B 62 562 235 HOH HOH . F 3 HOH B 63 563 236 HOH HOH . F 3 HOH B 64 564 241 HOH HOH . F 3 HOH B 65 565 242 HOH HOH . F 3 HOH B 66 566 243 HOH HOH . F 3 HOH B 67 567 249 HOH HOH . F 3 HOH B 68 568 252 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAG 0LH . . . D 2 -26.627 47.28 9.246 1 74.91 ? CAG 0LH 401 B 1 HETATM 2 C CAF 0LH . . . D 2 -27.299 46.485 10.194 1 69.33 ? CAF 0LH 401 B 1 HETATM 3 C CAJ 0LH . . . D 2 -27.955 45.444 9.484 1 71.71 ? CAJ 0LH 401 B 1 HETATM 4 C CAD 0LH . . . D 2 -28.78 44.357 9.891 1 74.7 ? CAD 0LH 401 B 1 HETATM 5 C CAB 0LH . . . D 2 -29.288 43.483 8.928 1 75.26 ? CAB 0LH 401 B 1 HETATM 6 C CAC 0LH . . . D 2 -28.997 43.669 7.57 1 75.24 ? CAC 0LH 401 B 1 HETATM 7 C CAE 0LH . . . D 2 -28.184 44.736 7.168 1 75.89 ? CAE 0LH 401 B 1 HETATM 8 C CAK 0LH . . . D 2 -27.664 45.63 8.146 1 73.58 ? CAK 0LH 401 B 1 HETATM 9 N NAL 0LH . . . D 2 -26.851 46.762 8.018 1 71.42 ? NAL 0LH 401 B 1 HETATM 10 C CAI 0LH . . . D 2 -26.308 47.287 6.752 1 66.78 ? CAI 0LH 401 B 1 HETATM 11 C CAH 0LH . . . D 2 -25.001 46.685 6.253 1 62.48 ? CAH 0LH 401 B 1 HETATM 12 N NAA 0LH . . . D 2 -24.618 45.358 6.717 1 59.96 ? NAA 0LH 401 B 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #