data_3V3O
#
_model_server_result.job_id            Hd5TCmHTi8QdO0_SH4fR7Q 
_model_server_result.datetime_utc      '2024-11-13 10:35:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3v3o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":401}' 
#
_entry.id    3V3O 
#
_exptl.entry_id    3V3O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              587.665 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TIGECYCLINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         111.02 
_cell.angle_beta          89.97 
_cell.angle_gamma         92.97 
_cell.entry_id            3V3O 
_cell.length_a            68.126 
_cell.length_b            80.08 
_cell.length_c            87.238 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3V3O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,S 1 1 
B,I,J,K,L,M,N,T 2 1 
C,O,P,U 3 1 
D,Q,R,V 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 M N N 
? 4 O N N 
? 4 Q N N 
#
_chem_comp.formula           'C29 H41 N5 O8 2' 
_chem_comp.formula_weight    587.665 
_chem_comp.id                T1C 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              TIGECYCLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C94 C93 T1C sing 385 n n 
C93 C95 T1C sing 386 n n 
C93 C96 T1C sing 387 n n 
C93 N92 T1C sing 388 n n 
N92 C92 T1C sing 389 n n 
C92 C91 T1C sing 390 n n 
C91 O91 T1C doub 391 n n 
C91 N9 T1C sing 392 n n 
N9 C9 T1C sing 393 n n 
C9 C8 T1C doub 394 n y 
C9 C10 T1C sing 395 n y 
C8 C7 T1C sing 396 n y 
C7 N7 T1C sing 397 n n 
C7 C61 T1C doub 398 n y 
C6 C61 T1C sing 399 n n 
N7 C71 T1C sing 400 n n 
N7 C72 T1C sing 401 n n 
C61 C1A T1C sing 402 n y 
C6 C51 T1C sing 403 n n 
C51 C5 T1C sing 404 n n 
C51 C1B T1C sing 405 n n 
C5 C41 T1C sing 406 n n 
C41 C4 T1C sing 407 n n 
C41 C1C T1C sing 408 n n 
C4 N4 T1C sing 409 n n 
C4 C3 T1C sing 410 n n 
N4 C43 T1C sing 411 n n 
N4 C42 T1C sing 412 n n 
C3 O3 T1C sing 413 n n 
C3 C2 T1C doub 414 n n 
C2 C21 T1C sing 415 n n 
C2 C1 T1C sing 416 n n 
C21 O21 T1C doub 417 n n 
C21 N21 T1C sing 418 n n 
C1 O1 T1C doub 419 n n 
C1 C1C T1C sing 420 n n 
C1C O1C T1C sing 421 n n 
C1C C12 T1C sing 422 n n 
C12 O12 T1C sing 423 n n 
C12 C1B T1C doub 424 n n 
C1B C11 T1C sing 425 n n 
C11 O11 T1C doub 426 n n 
C11 C1A T1C sing 427 n n 
C1A C10 T1C doub 428 n y 
C10 O10 T1C sing 429 n n 
C94 H941 T1C sing 430 n n 
C94 H942 T1C sing 431 n n 
C94 H943 T1C sing 432 n n 
C95 H951 T1C sing 433 n n 
C95 H952 T1C sing 434 n n 
C95 H953 T1C sing 435 n n 
C96 H961 T1C sing 436 n n 
C96 H962 T1C sing 437 n n 
C96 H963 T1C sing 438 n n 
N92 H92 T1C sing 439 n n 
C92 H921 T1C sing 440 n n 
C92 H922 T1C sing 441 n n 
N9 H9 T1C sing 442 n n 
C8 H8 T1C sing 443 n n 
C71 H711 T1C sing 444 n n 
C71 H712 T1C sing 445 n n 
C71 H713 T1C sing 446 n n 
C72 H721 T1C sing 447 n n 
C72 H722 T1C sing 448 n n 
C72 H723 T1C sing 449 n n 
C6 H61C T1C sing 450 n n 
C6 H62C T1C sing 451 n n 
C51 H51 T1C sing 452 n n 
C5 H51C T1C sing 453 n n 
C5 H52C T1C sing 454 n n 
C41 H41 T1C sing 455 n n 
C4 H4 T1C sing 456 n n 
C43 H431 T1C sing 457 n n 
C43 H432 T1C sing 458 n n 
C43 H433 T1C sing 459 n n 
C42 H421 T1C sing 460 n n 
C42 H422 T1C sing 461 n n 
C42 H423 T1C sing 462 n n 
O3 H3 T1C sing 463 n n 
N21 H211 T1C sing 464 n n 
N21 H212 T1C sing 465 n n 
O1C H1C T1C sing 466 n n 
O12 H12 T1C sing 467 n n 
O10 H10 T1C sing 468 n n 
N4 H42 T1C sing 469 n n 
N7 H7 T1C sing 470 n n 
#
_atom_sites.entry_id                     3V3O 
_atom_sites.fract_transf_matrix[1][1]    0.014679 
_atom_sites.fract_transf_matrix[1][2]    0.000762 
_atom_sites.fract_transf_matrix[1][3]    0.000285 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012504 
_atom_sites.fract_transf_matrix[2][3]    0.004812 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012282 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 401 401 SO4 SO4 . 
F 2 SO4 A 1 402 402 SO4 SO4 . 
G 3 FAD A 1 403 406 FAD FAD . 
H 4 T1C A 1 404 392 T1C T1C . 
I 2 SO4 B 1 401 402 SO4 SO4 . 
J 2 SO4 B 1 402 407 SO4 SO4 . 
K 3 FAD B 1 403 408 FAD FAD . 
L 2 SO4 B 1 404 403 SO4 SO4 . 
M 4 T1C B 1 405 392 T1C T1C . 
N 2 SO4 B 1 406 404 SO4 SO4 . 
O 4 T1C C 1 401 394 T1C T1C . 
P 3 FAD C 1 402 1384 FAD FAD . 
Q 4 T1C D 1 401 395 T1C T1C . 
R 3 FAD D 1 402 1384 FAD FAD . 
S 5 HOH A 1 501 502 HOH HOH . 
S 5 HOH A 2 502 503 HOH HOH . 
S 5 HOH A 3 503 506 HOH HOH . 
S 5 HOH A 4 504 508 HOH HOH . 
S 5 HOH A 5 505 509 HOH HOH . 
S 5 HOH A 6 506 511 HOH HOH . 
S 5 HOH A 7 507 512 HOH HOH . 
T 5 HOH B 1 501 501 HOH HOH . 
T 5 HOH B 2 502 504 HOH HOH . 
T 5 HOH B 3 503 509 HOH HOH . 
T 5 HOH B 4 504 510 HOH HOH . 
T 5 HOH B 5 505 512 HOH HOH . 
T 5 HOH B 6 506 514 HOH HOH . 
T 5 HOH B 7 507 516 HOH HOH . 
T 5 HOH B 8 508 517 HOH HOH . 
T 5 HOH B 9 509 519 HOH HOH . 
U 5 HOH C 1 501 506 HOH HOH . 
U 5 HOH C 2 502 508 HOH HOH . 
V 5 HOH D 1 501 501 HOH HOH . 
V 5 HOH D 2 502 502 HOH HOH . 
V 5 HOH D 3 503 507 HOH HOH . 
V 5 HOH D 4 504 508 HOH HOH . 
V 5 HOH D 5 505 510 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C94 T1C . . . O 4 22.019 61.503 -6.809 1 112.81 ? C94 T1C 401 C 1 
HETATM 2 C C93 T1C . . . O 4 20.683 61.592 -7.474 1 115.68 ? C93 T1C 401 C 1 
HETATM 3 C C95 T1C . . . O 4 19.639 61.283 -6.438 1 102.07 ? C95 T1C 401 C 1 
HETATM 4 C C96 T1C . . . O 4 20.635 60.514 -8.57 1 114.4 ? C96 T1C 401 C 1 
HETATM 5 N N92 T1C . . . O 4 20.525 62.963 -8.011 1 117.14 ? N92 T1C 401 C 1 
HETATM 6 C C92 T1C . . . O 4 21.307 63.359 -9.208 1 114.31 ? C92 T1C 401 C 1 
HETATM 7 C C91 T1C . . . O 4 20.378 63.916 -10.313 1 109.92 ? C91 T1C 401 C 1 
HETATM 8 O O91 T1C . . . O 4 20.149 63.226 -11.297 1 106.25 ? O91 T1C 401 C 1 
HETATM 9 N N9 T1C . . . O 4 19.778 65.275 -10.19 1 108.11 ? N9 T1C 401 C 1 
HETATM 10 C C9 T1C . . . O 4 18.855 65.87 -11.199 1 100.97 ? C9 T1C 401 C 1 
HETATM 11 C C8 T1C . . . O 4 17.81 65.049 -11.732 1 95.27 ? C8 T1C 401 C 1 
HETATM 12 C C7 T1C . . . O 4 16.885 65.561 -12.688 1 97.41 ? C7 T1C 401 C 1 
HETATM 13 N N7 T1C . . . O 4 15.828 64.68 -13.228 1 100.73 ? N7 T1C 401 C 1 
HETATM 14 C C71 T1C . . . O 4 16.287 63.319 -13.361 1 101.78 ? C71 T1C 401 C 1 
HETATM 15 C C72 T1C . . . O 4 14.637 64.781 -12.443 1 96.9 ? C72 T1C 401 C 1 
HETATM 16 C C61 T1C . . . O 4 17.006 67.022 -13.149 1 98.58 ? C61 T1C 401 C 1 
HETATM 17 C C6 T1C . . . O 4 15.952 67.519 -14.204 1 91.76 ? C6 T1C 401 C 1 
HETATM 18 C C51 T1C . . . O 4 16.285 68.897 -14.865 1 86.45 ? C51 T1C 401 C 1 
HETATM 19 C C5 T1C . . . O 4 15.023 69.657 -15.269 1 81.56 ? C5 T1C 401 C 1 
HETATM 20 C C41 T1C . . . O 4 15.53 70.773 -16.224 1 77.54 ? C41 T1C 401 C 1 
HETATM 21 C C4 T1C . . . O 4 14.326 71.324 -17.096 1 79.71 ? C4 T1C 401 C 1 
HETATM 22 N N4 T1C . . . O 4 14.615 71.131 -18.557 1 84.71 ? N4 T1C 401 C 1 
HETATM 23 C C43 T1C . . . O 4 14.904 69.717 -18.811 1 77.16 ? C43 T1C 401 C 1 
HETATM 24 C C42 T1C . . . O 4 13.544 71.501 -19.49 1 73.16 ? C42 T1C 401 C 1 
HETATM 25 C C3 T1C . . . O 4 13.736 72.69 -16.642 1 70.82 ? C3 T1C 401 C 1 
HETATM 26 O O3 T1C . . . O 4 12.604 73.214 -17.274 1 62.87 ? O3 T1C 401 C 1 
HETATM 27 C C2 T1C . . . O 4 14.271 73.403 -15.568 1 75.23 ? C2 T1C 401 C 1 
HETATM 28 C C21 T1C . . . O 4 13.595 74.699 -15.19 1 75.14 ? C21 T1C 401 C 1 
HETATM 29 O O21 T1C . . . O 4 12.431 74.88 -15.531 1 67.36 ? O21 T1C 401 C 1 
HETATM 30 N N21 T1C . . . O 4 14.246 75.731 -14.425 1 75.48 ? N21 T1C 401 C 1 
HETATM 31 C C1 T1C . . . O 4 15.474 72.917 -14.83 1 80.57 ? C1 T1C 401 C 1 
HETATM 32 O O1 T1C . . . O 4 15.802 73.496 -13.594 1 79.31 ? O1 T1C 401 C 1 
HETATM 33 C C1C T1C . . . O 4 16.342 71.827 -15.426 1 76.83 ? C1C T1C 401 C 1 
HETATM 34 O O1C T1C . . . O 4 17.181 72.405 -16.336 1 80.25 ? O1C T1C 401 C 1 
HETATM 35 C C12 T1C . . . O 4 17.221 71.135 -14.392 1 85.14 ? C12 T1C 401 C 1 
HETATM 36 O O12 T1C . . . O 4 18.109 71.935 -13.689 1 88.34 ? O12 T1C 401 C 1 
HETATM 37 C C1B T1C . . . O 4 17.185 69.817 -14.129 1 86.4 ? C1B T1C 401 C 1 
HETATM 38 C C11 T1C . . . O 4 18.097 69.246 -13.108 1 86.25 ? C11 T1C 401 C 1 
HETATM 39 O O11 T1C . . . O 4 19.106 70.047 -12.585 1 83.79 ? O11 T1C 401 C 1 
HETATM 40 C C1A T1C . . . O 4 17.98 67.838 -12.652 1 93.89 ? C1A T1C 401 C 1 
HETATM 41 C C10 T1C . . . O 4 18.97 67.263 -11.618 1 100.12 ? C10 T1C 401 C 1 
HETATM 42 O O10 T1C . . . O 4 19.997 68.05 -11.074 1 98.51 ? O10 T1C 401 C 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           42 
#