data_3V3O
#
_model_server_result.job_id            DIKKlXhcVU8PkRzlVW1ZDA 
_model_server_result.datetime_utc      '2024-11-28 15:18:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3v3o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":402}' 
#
_entry.id    3V3O 
#
_exptl.entry_id    3V3O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         111.02 
_cell.angle_beta          89.97 
_cell.angle_gamma         92.97 
_cell.entry_id            3V3O 
_cell.length_a            68.126 
_cell.length_b            80.08 
_cell.length_c            87.238 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3V3O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,S 1 1 
B,I,J,K,L,M,N,T 2 1 
C,O,P,U 3 1 
D,Q,R,V 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 K N N 
? 3 P N N 
? 3 R N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3V3O 
_atom_sites.fract_transf_matrix[1][1]    0.014679 
_atom_sites.fract_transf_matrix[1][2]    0.000762 
_atom_sites.fract_transf_matrix[1][3]    0.000285 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012504 
_atom_sites.fract_transf_matrix[2][3]    0.004812 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012282 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 401 401 SO4 SO4 . 
F 2 SO4 A 1 402 402 SO4 SO4 . 
G 3 FAD A 1 403 406 FAD FAD . 
H 4 T1C A 1 404 392 T1C T1C . 
I 2 SO4 B 1 401 402 SO4 SO4 . 
J 2 SO4 B 1 402 407 SO4 SO4 . 
K 3 FAD B 1 403 408 FAD FAD . 
L 2 SO4 B 1 404 403 SO4 SO4 . 
M 4 T1C B 1 405 392 T1C T1C . 
N 2 SO4 B 1 406 404 SO4 SO4 . 
O 4 T1C C 1 401 394 T1C T1C . 
P 3 FAD C 1 402 1384 FAD FAD . 
Q 4 T1C D 1 401 395 T1C T1C . 
R 3 FAD D 1 402 1384 FAD FAD . 
S 5 HOH A 1 501 502 HOH HOH . 
S 5 HOH A 2 502 503 HOH HOH . 
S 5 HOH A 3 503 506 HOH HOH . 
S 5 HOH A 4 504 508 HOH HOH . 
S 5 HOH A 5 505 509 HOH HOH . 
S 5 HOH A 6 506 511 HOH HOH . 
S 5 HOH A 7 507 512 HOH HOH . 
T 5 HOH B 1 501 501 HOH HOH . 
T 5 HOH B 2 502 504 HOH HOH . 
T 5 HOH B 3 503 509 HOH HOH . 
T 5 HOH B 4 504 510 HOH HOH . 
T 5 HOH B 5 505 512 HOH HOH . 
T 5 HOH B 6 506 514 HOH HOH . 
T 5 HOH B 7 507 516 HOH HOH . 
T 5 HOH B 8 508 517 HOH HOH . 
T 5 HOH B 9 509 519 HOH HOH . 
U 5 HOH C 1 501 506 HOH HOH . 
U 5 HOH C 2 502 508 HOH HOH . 
V 5 HOH D 1 501 501 HOH HOH . 
V 5 HOH D 2 502 502 HOH HOH . 
V 5 HOH D 3 503 507 HOH HOH . 
V 5 HOH D 4 504 508 HOH HOH . 
V 5 HOH D 5 505 510 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . P 3 26.371 77.734 -25.105 1 53.24 ? PA FAD 402 C 1 
HETATM 2 O O1A FAD . . . P 3 25.576 77.135 -26.29 1 49.49 ? O1A FAD 402 C 1 
HETATM 3 O O2A FAD . . . P 3 25.372 78.361 -24.081 1 58 ? O2A FAD 402 C 1 
HETATM 4 O O5B FAD . . . P 3 27.407 78.834 -25.494 1 41.46 ? O5B FAD 402 C 1 
HETATM 5 C C5B FAD . . . P 3 27.99 79.002 -26.73 1 46.15 ? C5B FAD 402 C 1 
HETATM 6 C C4B FAD . . . P 3 28.383 80.447 -27.011 1 50.53 ? C4B FAD 402 C 1 
HETATM 7 O O4B FAD . . . P 3 28.985 80.703 -28.3 1 49.02 ? O4B FAD 402 C 1 
HETATM 8 C C3B FAD . . . P 3 27.153 81.292 -26.935 1 53.88 ? C3B FAD 402 C 1 
HETATM 9 O O3B FAD . . . P 3 27.427 82.492 -26.31 1 58.59 ? O3B FAD 402 C 1 
HETATM 10 C C2B FAD . . . P 3 26.79 81.489 -28.296 1 50.95 ? C2B FAD 402 C 1 
HETATM 11 O O2B FAD . . . P 3 26.176 82.712 -28.469 1 53.31 ? O2B FAD 402 C 1 
HETATM 12 C C1B FAD . . . P 3 28.112 81.508 -29.03 1 47.52 ? C1B FAD 402 C 1 
HETATM 13 N N9A FAD . . . P 3 28.045 81.176 -30.468 1 50.16 ? N9A FAD 402 C 1 
HETATM 14 C C8A FAD . . . P 3 27.188 80.353 -31.093 1 52.9 ? C8A FAD 402 C 1 
HETATM 15 N N7A FAD . . . P 3 27.467 80.338 -32.423 1 52.81 ? N7A FAD 402 C 1 
HETATM 16 C C5A FAD . . . P 3 28.514 81.167 -32.646 1 51.38 ? C5A FAD 402 C 1 
HETATM 17 C C6A FAD . . . P 3 29.247 81.565 -33.777 1 49.3 ? C6A FAD 402 C 1 
HETATM 18 N N6A FAD . . . P 3 28.972 81.09 -35.083 1 50.91 ? N6A FAD 402 C 1 
HETATM 19 N N1A FAD . . . P 3 30.249 82.443 -33.642 1 52.49 ? N1A FAD 402 C 1 
HETATM 20 C C2A FAD . . . P 3 30.562 82.933 -32.425 1 53.37 ? C2A FAD 402 C 1 
HETATM 21 N N3A FAD . . . P 3 29.887 82.571 -31.32 1 47.47 ? N3A FAD 402 C 1 
HETATM 22 C C4A FAD . . . P 3 28.866 81.699 -31.41 1 49.67 ? C4A FAD 402 C 1 
HETATM 23 N N1 FAD . . . P 3 22.979 72.482 -17.988 1 63.86 ? N1 FAD 402 C 1 
HETATM 24 C C2 FAD . . . P 3 23.195 72.38 -16.587 1 67.16 ? C2 FAD 402 C 1 
HETATM 25 O O2 FAD . . . P 3 24.34 72.163 -16.163 1 72.6 ? O2 FAD 402 C 1 
HETATM 26 N N3 FAD . . . P 3 22.058 72.528 -15.737 1 72.18 ? N3 FAD 402 C 1 
HETATM 27 C C4 FAD . . . P 3 20.75 72.761 -16.216 1 71.69 ? C4 FAD 402 C 1 
HETATM 28 O O4 FAD . . . P 3 19.797 72.874 -15.444 1 77.78 ? O4 FAD 402 C 1 
HETATM 29 C C4X FAD . . . P 3 20.566 72.867 -17.678 1 62.65 ? C4X FAD 402 C 1 
HETATM 30 N N5 FAD . . . P 3 19.339 73.093 -18.208 1 65.95 ? N5 FAD 402 C 1 
HETATM 31 C C5X FAD . . . P 3 19.191 73.185 -19.537 1 71.11 ? C5X FAD 402 C 1 
HETATM 32 C C6 FAD . . . P 3 17.884 73.416 -19.987 1 68.52 ? C6 FAD 402 C 1 
HETATM 33 C C7 FAD . . . P 3 17.616 73.533 -21.335 1 67.64 ? C7 FAD 402 C 1 
HETATM 34 C C7M FAD . . . P 3 16.232 73.779 -21.772 1 73.46 ? C7M FAD 402 C 1 
HETATM 35 C C8 FAD . . . P 3 18.644 73.416 -22.256 1 76.4 ? C8 FAD 402 C 1 
HETATM 36 C C8M FAD . . . P 3 18.361 73.535 -23.736 1 72.76 ? C8M FAD 402 C 1 
HETATM 37 C C9 FAD . . . P 3 19.949 73.183 -21.804 1 70.05 ? C9 FAD 402 C 1 
HETATM 38 C C9A FAD . . . P 3 20.247 73.066 -20.428 1 64.67 ? C9A FAD 402 C 1 
HETATM 39 N N10 FAD . . . P 3 21.494 72.832 -19.935 1 61.36 ? N10 FAD 402 C 1 
HETATM 40 C C10 FAD . . . P 3 21.667 72.735 -18.558 1 63.47 ? C10 FAD 402 C 1 
HETATM 41 C C1' FAD . . . P 3 22.704 72.701 -20.776 1 60.63 ? C1' FAD 402 C 1 
HETATM 42 C C2' FAD . . . P 3 23.742 73.834 -20.587 1 61.94 ? C2' FAD 402 C 1 
HETATM 43 O O2' FAD . . . P 3 23.18 75.121 -20.534 1 66.65 ? O2' FAD 402 C 1 
HETATM 44 C C3' FAD . . . P 3 24.969 73.833 -21.569 1 59.82 ? C3' FAD 402 C 1 
HETATM 45 O O3' FAD . . . P 3 25.716 72.671 -21.302 1 64.2 ? O3' FAD 402 C 1 
HETATM 46 C C4' FAD . . . P 3 25.868 75.061 -21.525 1 61.99 ? C4' FAD 402 C 1 
HETATM 47 O O4' FAD . . . P 3 25.142 76.211 -21.671 1 62.32 ? O4' FAD 402 C 1 
HETATM 48 C C5' FAD . . . P 3 26.938 75.044 -22.622 1 50.25 ? C5' FAD 402 C 1 
HETATM 49 O O5' FAD . . . P 3 27.918 76.021 -22.615 1 47.65 ? O5' FAD 402 C 1 
HETATM 50 P P FAD . . . P 3 28.651 76.34 -23.969 1 56.53 ? P FAD 402 C 1 
HETATM 51 O O1P FAD . . . P 3 29.517 77.485 -23.317 1 51.47 ? O1P FAD 402 C 1 
HETATM 52 O O2P FAD . . . P 3 29.223 74.906 -23.74 1 63.16 ? O2P FAD 402 C 1 
HETATM 53 O O3P FAD . . . P 3 27.123 76.527 -24.41 1 62.49 ? O3P FAD 402 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#