data_3V3O
#
_model_server_result.job_id            qAXlsY48opaQNz7XyqtjIw 
_model_server_result.datetime_utc      '2024-11-13 10:27:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3v3o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":403}' 
#
_entry.id    3V3O 
#
_exptl.entry_id    3V3O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         111.02 
_cell.angle_beta          89.97 
_cell.angle_gamma         92.97 
_cell.entry_id            3V3O 
_cell.length_a            68.126 
_cell.length_b            80.08 
_cell.length_c            87.238 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3V3O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,S 1 1 
B,I,J,K,L,M,N,T 2 1 
C,O,P,U 3 1 
D,Q,R,V 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 K N N 
? 3 P N N 
? 3 R N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3V3O 
_atom_sites.fract_transf_matrix[1][1]    0.014679 
_atom_sites.fract_transf_matrix[1][2]    0.000762 
_atom_sites.fract_transf_matrix[1][3]    0.000285 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012504 
_atom_sites.fract_transf_matrix[2][3]    0.004812 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012282 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 401 401 SO4 SO4 . 
F 2 SO4 A 1 402 402 SO4 SO4 . 
G 3 FAD A 1 403 406 FAD FAD . 
H 4 T1C A 1 404 392 T1C T1C . 
I 2 SO4 B 1 401 402 SO4 SO4 . 
J 2 SO4 B 1 402 407 SO4 SO4 . 
K 3 FAD B 1 403 408 FAD FAD . 
L 2 SO4 B 1 404 403 SO4 SO4 . 
M 4 T1C B 1 405 392 T1C T1C . 
N 2 SO4 B 1 406 404 SO4 SO4 . 
O 4 T1C C 1 401 394 T1C T1C . 
P 3 FAD C 1 402 1384 FAD FAD . 
Q 4 T1C D 1 401 395 T1C T1C . 
R 3 FAD D 1 402 1384 FAD FAD . 
S 5 HOH A 1 501 502 HOH HOH . 
S 5 HOH A 2 502 503 HOH HOH . 
S 5 HOH A 3 503 506 HOH HOH . 
S 5 HOH A 4 504 508 HOH HOH . 
S 5 HOH A 5 505 509 HOH HOH . 
S 5 HOH A 6 506 511 HOH HOH . 
S 5 HOH A 7 507 512 HOH HOH . 
T 5 HOH B 1 501 501 HOH HOH . 
T 5 HOH B 2 502 504 HOH HOH . 
T 5 HOH B 3 503 509 HOH HOH . 
T 5 HOH B 4 504 510 HOH HOH . 
T 5 HOH B 5 505 512 HOH HOH . 
T 5 HOH B 6 506 514 HOH HOH . 
T 5 HOH B 7 507 516 HOH HOH . 
T 5 HOH B 8 508 517 HOH HOH . 
T 5 HOH B 9 509 519 HOH HOH . 
U 5 HOH C 1 501 506 HOH HOH . 
U 5 HOH C 2 502 508 HOH HOH . 
V 5 HOH D 1 501 501 HOH HOH . 
V 5 HOH D 2 502 502 HOH HOH . 
V 5 HOH D 3 503 507 HOH HOH . 
V 5 HOH D 4 504 508 HOH HOH . 
V 5 HOH D 5 505 510 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . G 3 9.134 28.38 -19.853 1 35.31 ? PA FAD 403 A 1 
HETATM 2 O O1A FAD . . . G 3 10.145 29.263 -20.64 1 42.07 ? O1A FAD 403 A 1 
HETATM 3 O O2A FAD . . . G 3 9.871 27.654 -18.691 1 32.18 ? O2A FAD 403 A 1 
HETATM 4 O O5B FAD . . . G 3 8.393 27.289 -20.694 1 34.14 ? O5B FAD 403 A 1 
HETATM 5 C C5B FAD . . . G 3 7.938 27.562 -21.96 1 39.99 ? C5B FAD 403 A 1 
HETATM 6 C C4B FAD . . . G 3 7.333 26.363 -22.659 1 46.18 ? C4B FAD 403 A 1 
HETATM 7 O O4B FAD . . . G 3 6.675 26.685 -23.91 1 47.69 ? O4B FAD 403 A 1 
HETATM 8 C C3B FAD . . . G 3 8.386 25.353 -22.983 1 47.51 ? C3B FAD 403 A 1 
HETATM 9 O O3B FAD . . . G 3 7.843 24.082 -22.901 1 48.85 ? O3B FAD 403 A 1 
HETATM 10 C C2B FAD . . . G 3 8.735 25.735 -24.321 1 45.33 ? C2B FAD 403 A 1 
HETATM 11 O O2B FAD . . . G 3 9.357 24.772 -25.091 1 38.93 ? O2B FAD 403 A 1 
HETATM 12 C C1B FAD . . . G 3 7.391 26.071 -24.924 1 44.69 ? C1B FAD 403 A 1 
HETATM 13 N N9A FAD . . . G 3 7.467 26.938 -26.091 1 48.16 ? N9A FAD 403 A 1 
HETATM 14 C C8A FAD . . . G 3 8.339 27.935 -26.289 1 49.21 ? C8A FAD 403 A 1 
HETATM 15 N N7A FAD . . . G 3 8.082 28.487 -27.486 1 50.19 ? N7A FAD 403 A 1 
HETATM 16 C C5A FAD . . . G 3 7.044 27.827 -28.05 1 52.36 ? C5A FAD 403 A 1 
HETATM 17 C C6A FAD . . . G 3 6.344 27.944 -29.263 1 49.37 ? C6A FAD 403 A 1 
HETATM 18 N N6A FAD . . . G 3 6.691 28.938 -30.213 1 48.62 ? N6A FAD 403 A 1 
HETATM 19 N N1A FAD . . . G 3 5.333 27.108 -29.532 1 47.27 ? N1A FAD 403 A 1 
HETATM 20 C C2A FAD . . . G 3 4.997 26.161 -28.631 1 53.15 ? C2A FAD 403 A 1 
HETATM 21 N N3A FAD . . . G 3 5.647 26.019 -27.452 1 49 ? N3A FAD 403 A 1 
HETATM 22 C C4A FAD . . . G 3 6.661 26.844 -27.155 1 47.82 ? C4A FAD 403 A 1 
HETATM 23 N N1 FAD . . . G 3 12.243 30.884 -11.495 1 57.18 ? N1 FAD 403 A 1 
HETATM 24 C C2 FAD . . . G 3 11.961 30.48 -10.13 1 62.15 ? C2 FAD 403 A 1 
HETATM 25 O O2 FAD . . . G 3 10.796 30.452 -9.659 1 62.68 ? O2 FAD 403 A 1 
HETATM 26 N N3 FAD . . . G 3 13.088 30.111 -9.335 1 63.55 ? N3 FAD 403 A 1 
HETATM 27 C C4 FAD . . . G 3 14.407 30.136 -9.836 1 59.42 ? C4 FAD 403 A 1 
HETATM 28 O O4 FAD . . . G 3 15.363 29.829 -9.146 1 68.46 ? O4 FAD 403 A 1 
HETATM 29 C C4X FAD . . . G 3 14.648 30.552 -11.212 1 47.64 ? C4X FAD 403 A 1 
HETATM 30 N N5 FAD . . . G 3 15.917 30.573 -11.672 1 55.34 ? N5 FAD 403 A 1 
HETATM 31 C C5X FAD . . . G 3 16.192 30.947 -12.92 1 56.34 ? C5X FAD 403 A 1 
HETATM 32 C C6 FAD . . . G 3 17.549 30.93 -13.283 1 50.47 ? C6 FAD 403 A 1 
HETATM 33 C C7 FAD . . . G 3 17.94 31.292 -14.565 1 56.26 ? C7 FAD 403 A 1 
HETATM 34 C C7M FAD . . . G 3 19.374 31.268 -14.917 1 56.82 ? C7M FAD 403 A 1 
HETATM 35 C C8 FAD . . . G 3 16.985 31.676 -15.496 1 54.62 ? C8 FAD 403 A 1 
HETATM 36 C C8M FAD . . . G 3 17.412 32.08 -16.882 1 48.13 ? C8M FAD 403 A 1 
HETATM 37 C C9 FAD . . . G 3 15.629 31.696 -15.125 1 53.34 ? C9 FAD 403 A 1 
HETATM 38 C C9A FAD . . . G 3 15.194 31.324 -13.813 1 57.23 ? C9A FAD 403 A 1 
HETATM 39 N N10 FAD . . . G 3 13.881 31.309 -13.373 1 51.81 ? N10 FAD 403 A 1 
HETATM 40 C C10 FAD . . . G 3 13.595 30.92 -12.058 1 47.14 ? C10 FAD 403 A 1 
HETATM 41 C C1' FAD . . . G 3 12.736 31.673 -14.243 1 46.67 ? C1' FAD 403 A 1 
HETATM 42 C C2' FAD . . . G 3 11.868 30.477 -14.698 1 46.57 ? C2' FAD 403 A 1 
HETATM 43 O O2' FAD . . . G 3 12.534 29.433 -15.376 1 52.57 ? O2' FAD 403 A 1 
HETATM 44 C C3' FAD . . . G 3 10.553 30.776 -15.505 1 39.8 ? C3' FAD 403 A 1 
HETATM 45 O O3' FAD . . . G 3 9.862 31.808 -14.863 1 37.29 ? O3' FAD 403 A 1 
HETATM 46 C C4' FAD . . . G 3 9.751 29.487 -15.661 1 41.34 ? C4' FAD 403 A 1 
HETATM 47 O O4' FAD . . . G 3 10.493 28.588 -16.405 1 39.81 ? O4' FAD 403 A 1 
HETATM 48 C C5' FAD . . . G 3 8.312 29.599 -16.212 1 38.8 ? C5' FAD 403 A 1 
HETATM 49 O O5' FAD . . . G 3 8.041 29.932 -17.534 1 38 ? O5' FAD 403 A 1 
HETATM 50 P P FAD . . . G 3 7.001 29.155 -18.421 1 42.38 ? P FAD 403 A 1 
HETATM 51 O O1P FAD . . . G 3 7.193 27.816 -17.647 1 43.73 ? O1P FAD 403 A 1 
HETATM 52 O O2P FAD . . . G 3 6.091 30.244 -17.789 1 45.45 ? O2P FAD 403 A 1 
HETATM 53 O O3P FAD . . . G 3 8.089 29.469 -19.487 1 42.51 ? O3P FAD 403 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#