data_3V4E # _model_server_result.job_id RtOQl2qPi4b-oB0ceSTJSw _model_server_result.datetime_utc '2024-12-21 16:22:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":200}' # _entry.id 3V4E # _exptl.entry_id 3V4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 89.75 _cell.angle_beta 89.78 _cell.angle_gamma 89.94 _cell.entry_id 3V4E _cell.length_a 53.424 _cell.length_b 53.461 _cell.length_c 53.477 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 323 n n C1 C2 PEG sing 324 n n C1 H11 PEG sing 325 n n C1 H12 PEG sing 326 n n O1 HO1 PEG sing 327 n n C2 O2 PEG sing 328 n n C2 H21 PEG sing 329 n n C2 H22 PEG sing 330 n n O2 C3 PEG sing 331 n n C3 C4 PEG sing 332 n n C3 H31 PEG sing 333 n n C3 H32 PEG sing 334 n n C4 O4 PEG sing 335 n n C4 H41 PEG sing 336 n n C4 H42 PEG sing 337 n n O4 HO4 PEG sing 338 n n # _atom_sites.entry_id 3V4E _atom_sites.fract_transf_matrix[1][1] 0.018718 _atom_sites.fract_transf_matrix[1][2] -0.000019 _atom_sites.fract_transf_matrix[1][3] -0.000073 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018705 _atom_sites.fract_transf_matrix[2][3] -0.000083 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PEG A 1 200 1 PEG PEG . E 3 PGE A 1 201 1 PGE PGE . F 4 COA A 1 202 1 COA COA . G 5 SO4 A 1 203 1 SO4 SO4 . H 4 COA B 1 200 1 COA COA . I 4 COA B 1 201 1 COA COA . J 6 HOH A 1 204 4 HOH HOH . J 6 HOH A 2 205 6 HOH HOH . J 6 HOH A 3 206 8 HOH HOH . J 6 HOH A 4 207 21 HOH HOH . J 6 HOH A 5 208 22 HOH HOH . J 6 HOH A 6 209 24 HOH HOH . J 6 HOH A 7 210 27 HOH HOH . J 6 HOH A 8 211 211 HOH HOH . J 6 HOH A 9 212 28 HOH HOH . J 6 HOH A 10 213 33 HOH HOH . J 6 HOH A 11 214 34 HOH HOH . J 6 HOH A 12 215 37 HOH HOH . J 6 HOH A 13 216 41 HOH HOH . J 6 HOH A 14 217 43 HOH HOH . J 6 HOH A 15 218 44 HOH HOH . J 6 HOH A 16 219 45 HOH HOH . J 6 HOH A 17 220 50 HOH HOH . J 6 HOH A 18 221 52 HOH HOH . J 6 HOH A 19 222 56 HOH HOH . J 6 HOH A 20 223 58 HOH HOH . J 6 HOH A 21 224 59 HOH HOH . J 6 HOH A 22 225 61 HOH HOH . J 6 HOH A 23 226 64 HOH HOH . J 6 HOH A 24 227 69 HOH HOH . J 6 HOH A 25 228 76 HOH HOH . J 6 HOH A 26 229 81 HOH HOH . J 6 HOH A 27 230 82 HOH HOH . J 6 HOH A 28 231 83 HOH HOH . J 6 HOH A 29 232 97 HOH HOH . J 6 HOH A 30 233 233 HOH HOH . J 6 HOH A 31 234 234 HOH HOH . J 6 HOH A 32 235 101 HOH HOH . J 6 HOH A 33 236 104 HOH HOH . J 6 HOH A 34 237 106 HOH HOH . J 6 HOH A 35 238 108 HOH HOH . J 6 HOH A 36 239 239 HOH HOH . J 6 HOH A 37 240 114 HOH HOH . J 6 HOH A 38 241 126 HOH HOH . J 6 HOH A 39 242 131 HOH HOH . J 6 HOH A 40 243 132 HOH HOH . J 6 HOH A 41 244 135 HOH HOH . J 6 HOH A 42 245 141 HOH HOH . J 6 HOH A 43 246 146 HOH HOH . J 6 HOH A 44 247 247 HOH HOH . J 6 HOH A 45 248 248 HOH HOH . J 6 HOH A 46 249 249 HOH HOH . J 6 HOH A 47 250 250 HOH HOH . J 6 HOH A 48 251 251 HOH HOH . J 6 HOH A 49 252 153 HOH HOH . J 6 HOH A 50 253 154 HOH HOH . J 6 HOH A 51 254 156 HOH HOH . J 6 HOH A 52 255 158 HOH HOH . J 6 HOH A 53 256 176 HOH HOH . J 6 HOH A 54 257 178 HOH HOH . J 6 HOH A 55 258 181 HOH HOH . J 6 HOH A 56 259 198 HOH HOH . J 6 HOH A 57 260 202 HOH HOH . J 6 HOH A 58 265 265 HOH HOH . J 6 HOH A 59 266 266 HOH HOH . K 6 HOH B 1 202 3 HOH HOH . K 6 HOH B 2 203 9 HOH HOH . K 6 HOH B 3 204 204 HOH HOH . K 6 HOH B 4 205 11 HOH HOH . K 6 HOH B 5 206 16 HOH HOH . K 6 HOH B 6 207 207 HOH HOH . K 6 HOH B 7 208 18 HOH HOH . K 6 HOH B 8 209 25 HOH HOH . K 6 HOH B 9 210 26 HOH HOH . K 6 HOH B 10 211 29 HOH HOH . K 6 HOH B 11 212 30 HOH HOH . K 6 HOH B 12 213 39 HOH HOH . K 6 HOH B 13 214 40 HOH HOH . K 6 HOH B 14 215 46 HOH HOH . K 6 HOH B 15 216 48 HOH HOH . K 6 HOH B 16 217 51 HOH HOH . K 6 HOH B 17 218 54 HOH HOH . K 6 HOH B 18 219 219 HOH HOH . K 6 HOH B 19 220 220 HOH HOH . K 6 HOH B 20 221 57 HOH HOH . K 6 HOH B 21 222 62 HOH HOH . K 6 HOH B 22 223 66 HOH HOH . K 6 HOH B 23 224 67 HOH HOH . K 6 HOH B 24 225 225 HOH HOH . K 6 HOH B 25 226 226 HOH HOH . K 6 HOH B 26 227 227 HOH HOH . K 6 HOH B 27 228 68 HOH HOH . K 6 HOH B 28 229 229 HOH HOH . K 6 HOH B 29 230 71 HOH HOH . K 6 HOH B 30 231 231 HOH HOH . K 6 HOH B 31 232 77 HOH HOH . K 6 HOH B 32 233 78 HOH HOH . K 6 HOH B 33 234 79 HOH HOH . K 6 HOH B 34 235 84 HOH HOH . K 6 HOH B 35 236 236 HOH HOH . K 6 HOH B 36 237 93 HOH HOH . K 6 HOH B 37 238 238 HOH HOH . K 6 HOH B 38 239 98 HOH HOH . K 6 HOH B 39 240 240 HOH HOH . K 6 HOH B 40 241 241 HOH HOH . K 6 HOH B 41 242 110 HOH HOH . K 6 HOH B 42 243 243 HOH HOH . K 6 HOH B 43 244 244 HOH HOH . K 6 HOH B 44 245 111 HOH HOH . K 6 HOH B 45 246 112 HOH HOH . K 6 HOH B 46 247 118 HOH HOH . K 6 HOH B 47 248 125 HOH HOH . K 6 HOH B 48 249 128 HOH HOH . K 6 HOH B 49 250 133 HOH HOH . K 6 HOH B 50 251 138 HOH HOH . K 6 HOH B 51 252 252 HOH HOH . K 6 HOH B 52 253 253 HOH HOH . K 6 HOH B 53 254 254 HOH HOH . K 6 HOH B 54 255 255 HOH HOH . K 6 HOH B 55 256 256 HOH HOH . K 6 HOH B 56 257 257 HOH HOH . K 6 HOH B 57 258 258 HOH HOH . K 6 HOH B 58 259 259 HOH HOH . K 6 HOH B 59 260 260 HOH HOH . K 6 HOH B 60 261 139 HOH HOH . K 6 HOH B 61 262 142 HOH HOH . K 6 HOH B 62 263 144 HOH HOH . K 6 HOH B 63 264 145 HOH HOH . K 6 HOH B 64 265 147 HOH HOH . K 6 HOH B 65 266 148 HOH HOH . K 6 HOH B 66 267 151 HOH HOH . K 6 HOH B 67 268 152 HOH HOH . K 6 HOH B 68 269 161 HOH HOH . K 6 HOH B 69 270 162 HOH HOH . K 6 HOH B 70 271 189 HOH HOH . K 6 HOH B 71 272 192 HOH HOH . K 6 HOH B 72 273 195 HOH HOH . K 6 HOH B 73 274 201 HOH HOH . L 6 HOH C 1 200 12 HOH HOH . L 6 HOH C 2 201 13 HOH HOH . L 6 HOH C 3 202 14 HOH HOH . L 6 HOH C 4 203 15 HOH HOH . L 6 HOH C 5 204 17 HOH HOH . L 6 HOH C 6 205 19 HOH HOH . L 6 HOH C 7 206 206 HOH HOH . L 6 HOH C 8 207 20 HOH HOH . L 6 HOH C 9 208 208 HOH HOH . L 6 HOH C 10 209 31 HOH HOH . L 6 HOH C 11 210 32 HOH HOH . L 6 HOH C 12 211 35 HOH HOH . L 6 HOH C 13 212 36 HOH HOH . L 6 HOH C 14 213 38 HOH HOH . L 6 HOH C 15 214 42 HOH HOH . L 6 HOH C 16 215 47 HOH HOH . L 6 HOH C 17 216 49 HOH HOH . L 6 HOH C 18 217 55 HOH HOH . L 6 HOH C 19 218 60 HOH HOH . L 6 HOH C 20 219 63 HOH HOH . L 6 HOH C 21 220 65 HOH HOH . L 6 HOH C 22 221 72 HOH HOH . L 6 HOH C 23 222 74 HOH HOH . L 6 HOH C 24 223 75 HOH HOH . L 6 HOH C 25 224 80 HOH HOH . L 6 HOH C 26 225 85 HOH HOH . L 6 HOH C 27 226 86 HOH HOH . L 6 HOH C 28 227 87 HOH HOH . L 6 HOH C 29 228 228 HOH HOH . L 6 HOH C 30 229 88 HOH HOH . L 6 HOH C 31 230 90 HOH HOH . L 6 HOH C 32 231 91 HOH HOH . L 6 HOH C 33 232 232 HOH HOH . L 6 HOH C 34 233 92 HOH HOH . L 6 HOH C 35 234 94 HOH HOH . L 6 HOH C 36 235 235 HOH HOH . L 6 HOH C 37 236 95 HOH HOH . L 6 HOH C 38 237 96 HOH HOH . L 6 HOH C 39 238 99 HOH HOH . L 6 HOH C 40 239 102 HOH HOH . L 6 HOH C 41 240 105 HOH HOH . L 6 HOH C 42 241 117 HOH HOH . L 6 HOH C 43 242 119 HOH HOH . L 6 HOH C 44 243 129 HOH HOH . L 6 HOH C 45 244 130 HOH HOH . L 6 HOH C 46 245 245 HOH HOH . L 6 HOH C 47 246 246 HOH HOH . L 6 HOH C 48 247 134 HOH HOH . L 6 HOH C 49 248 140 HOH HOH . L 6 HOH C 50 249 149 HOH HOH . L 6 HOH C 51 250 150 HOH HOH . L 6 HOH C 52 251 157 HOH HOH . L 6 HOH C 53 252 159 HOH HOH . L 6 HOH C 54 253 164 HOH HOH . L 6 HOH C 55 254 167 HOH HOH . L 6 HOH C 56 255 169 HOH HOH . L 6 HOH C 57 256 170 HOH HOH . L 6 HOH C 58 257 174 HOH HOH . L 6 HOH C 59 258 180 HOH HOH . L 6 HOH C 60 259 182 HOH HOH . L 6 HOH C 61 260 183 HOH HOH . L 6 HOH C 62 261 261 HOH HOH . L 6 HOH C 63 262 262 HOH HOH . L 6 HOH C 64 263 263 HOH HOH . L 6 HOH C 65 264 264 HOH HOH . L 6 HOH C 66 265 185 HOH HOH . L 6 HOH C 67 266 186 HOH HOH . L 6 HOH C 68 267 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 2 -15.006 -0.218 -6.084 1 45.27 ? C1 PEG 200 A 1 HETATM 2 O O1 PEG . . . D 2 -15.806 -0.512 -4.946 1 40.45 ? O1 PEG 200 A 1 HETATM 3 C C2 PEG . . . D 2 -13.768 0.528 -5.713 1 49.53 ? C2 PEG 200 A 1 HETATM 4 O O2 PEG . . . D 2 -12.662 0.013 -6.433 1 50.52 ? O2 PEG 200 A 1 HETATM 5 C C3 PEG . . . D 2 -12.015 0.974 -7.26 1 47.64 ? C3 PEG 200 A 1 HETATM 6 C C4 PEG . . . D 2 -12.418 0.754 -8.727 1 49.77 ? C4 PEG 200 A 1 HETATM 7 O O4 PEG . . . D 2 -12.819 -0.605 -9.06 1 48.73 ? O4 PEG 200 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 7 #