data_3V4J # _model_server_result.job_id K1wB57D3T4qvvwrQSntRpA _model_server_result.datetime_utc '2024-11-05 23:03:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 3V4J # _exptl.entry_id 3V4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.38 _cell.angle_gamma 90 _cell.entry_id 3V4J _cell.length_a 53.08 _cell.length_b 67.764 _cell.length_c 64.472 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,C,D,E,I 3 1 B,F,G,H,J 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_656 x+1,y,z+1 1 0 0 0 1 0 0 0 1 33.821718 0 61.528509 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 131 A CYS 308 1_555 E C4 PQR . A PQR 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.71 ? covale ? covale2 B SG CYS 131 B CYS 308 1_555 H C4 PQR . B PQR 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.69 ? metalc ? metalc1 A ND1 HIS 71 A HIS 248 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 A NE2 HIS 73 A HIS 250 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 A ND1 HIS 80 A HIS 257 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc4 A SG CYS 111 A CYS 288 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc5 A SG CYS 114 A CYS 291 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc6 B ND1 HIS 71 B HIS 248 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc7 B NE2 HIS 73 B HIS 250 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc8 B ND1 HIS 80 B HIS 257 1_555 G ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc9 B SG CYS 111 B CYS 288 1_555 G ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc10 B SG CYS 114 B CYS 291 1_555 G ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3V4J _atom_sites.fract_transf_matrix[1][1] 0.018839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005897 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 2 ZN A 1 402 2 ZN ZN . E 3 PQR A 1 403 308 PQR PQR . F 2 ZN B 1 401 3 ZN ZN . G 2 ZN B 1 402 4 ZN ZN . H 3 PQR B 1 403 308 PQR PQR . I 4 HOH A 1 501 1 HOH HOH . I 4 HOH A 2 502 2 HOH HOH . I 4 HOH A 3 503 3 HOH HOH . I 4 HOH A 4 504 4 HOH HOH . I 4 HOH A 5 505 5 HOH HOH . I 4 HOH A 6 506 6 HOH HOH . I 4 HOH A 7 507 7 HOH HOH . I 4 HOH A 8 508 9 HOH HOH . I 4 HOH A 9 509 10 HOH HOH . I 4 HOH A 10 510 11 HOH HOH . I 4 HOH A 11 511 12 HOH HOH . I 4 HOH A 12 512 16 HOH HOH . I 4 HOH A 13 513 17 HOH HOH . I 4 HOH A 14 514 19 HOH HOH . I 4 HOH A 15 515 21 HOH HOH . I 4 HOH A 16 516 24 HOH HOH . I 4 HOH A 17 517 25 HOH HOH . I 4 HOH A 18 518 26 HOH HOH . I 4 HOH A 19 519 27 HOH HOH . I 4 HOH A 20 520 29 HOH HOH . I 4 HOH A 21 521 30 HOH HOH . I 4 HOH A 22 522 31 HOH HOH . I 4 HOH A 23 523 32 HOH HOH . I 4 HOH A 24 524 34 HOH HOH . I 4 HOH A 25 525 35 HOH HOH . I 4 HOH A 26 526 38 HOH HOH . I 4 HOH A 27 527 39 HOH HOH . I 4 HOH A 28 528 41 HOH HOH . I 4 HOH A 29 529 42 HOH HOH . I 4 HOH A 30 530 43 HOH HOH . I 4 HOH A 31 531 44 HOH HOH . I 4 HOH A 32 532 45 HOH HOH . I 4 HOH A 33 533 47 HOH HOH . I 4 HOH A 34 534 49 HOH HOH . I 4 HOH A 35 535 50 HOH HOH . I 4 HOH A 36 536 51 HOH HOH . I 4 HOH A 37 537 52 HOH HOH . I 4 HOH A 38 538 53 HOH HOH . I 4 HOH A 39 539 54 HOH HOH . I 4 HOH A 40 540 55 HOH HOH . I 4 HOH A 41 541 57 HOH HOH . I 4 HOH A 42 542 61 HOH HOH . I 4 HOH A 43 543 62 HOH HOH . I 4 HOH A 44 544 64 HOH HOH . I 4 HOH A 45 545 65 HOH HOH . I 4 HOH A 46 546 66 HOH HOH . I 4 HOH A 47 547 67 HOH HOH . I 4 HOH A 48 548 71 HOH HOH . I 4 HOH A 49 549 74 HOH HOH . I 4 HOH A 50 550 76 HOH HOH . I 4 HOH A 51 551 79 HOH HOH . I 4 HOH A 52 552 82 HOH HOH . I 4 HOH A 53 553 83 HOH HOH . I 4 HOH A 54 554 84 HOH HOH . I 4 HOH A 55 555 90 HOH HOH . I 4 HOH A 56 556 92 HOH HOH . I 4 HOH A 57 557 94 HOH HOH . I 4 HOH A 58 558 96 HOH HOH . I 4 HOH A 59 559 99 HOH HOH . I 4 HOH A 60 560 101 HOH HOH . I 4 HOH A 61 561 104 HOH HOH . I 4 HOH A 62 562 107 HOH HOH . I 4 HOH A 63 563 108 HOH HOH . I 4 HOH A 64 564 109 HOH HOH . I 4 HOH A 65 565 114 HOH HOH . I 4 HOH A 66 566 115 HOH HOH . I 4 HOH A 67 567 116 HOH HOH . I 4 HOH A 68 568 117 HOH HOH . I 4 HOH A 69 569 118 HOH HOH . I 4 HOH A 70 570 119 HOH HOH . I 4 HOH A 71 571 120 HOH HOH . I 4 HOH A 72 572 121 HOH HOH . I 4 HOH A 73 573 123 HOH HOH . I 4 HOH A 74 574 124 HOH HOH . I 4 HOH A 75 575 125 HOH HOH . I 4 HOH A 76 576 126 HOH HOH . I 4 HOH A 77 577 127 HOH HOH . I 4 HOH A 78 578 128 HOH HOH . I 4 HOH A 79 579 134 HOH HOH . I 4 HOH A 80 580 135 HOH HOH . I 4 HOH A 81 581 136 HOH HOH . I 4 HOH A 82 582 138 HOH HOH . I 4 HOH A 83 583 139 HOH HOH . I 4 HOH A 84 584 140 HOH HOH . I 4 HOH A 85 585 141 HOH HOH . I 4 HOH A 86 586 142 HOH HOH . I 4 HOH A 87 587 143 HOH HOH . I 4 HOH A 88 588 144 HOH HOH . I 4 HOH A 89 589 145 HOH HOH . I 4 HOH A 90 590 146 HOH HOH . I 4 HOH A 91 591 147 HOH HOH . I 4 HOH A 92 592 148 HOH HOH . I 4 HOH A 93 593 154 HOH HOH . I 4 HOH A 94 594 112 HOH HOH . J 4 HOH B 1 501 8 HOH HOH . J 4 HOH B 2 502 13 HOH HOH . J 4 HOH B 3 503 14 HOH HOH . J 4 HOH B 4 504 15 HOH HOH . J 4 HOH B 5 505 18 HOH HOH . J 4 HOH B 6 506 20 HOH HOH . J 4 HOH B 7 507 22 HOH HOH . J 4 HOH B 8 508 23 HOH HOH . J 4 HOH B 9 509 28 HOH HOH . J 4 HOH B 10 510 33 HOH HOH . J 4 HOH B 11 511 36 HOH HOH . J 4 HOH B 12 512 37 HOH HOH . J 4 HOH B 13 513 40 HOH HOH . J 4 HOH B 14 514 46 HOH HOH . J 4 HOH B 15 515 48 HOH HOH . J 4 HOH B 16 516 56 HOH HOH . J 4 HOH B 17 517 58 HOH HOH . J 4 HOH B 18 518 59 HOH HOH . J 4 HOH B 19 519 60 HOH HOH . J 4 HOH B 20 520 63 HOH HOH . J 4 HOH B 21 521 68 HOH HOH . J 4 HOH B 22 522 69 HOH HOH . J 4 HOH B 23 523 70 HOH HOH . J 4 HOH B 24 524 72 HOH HOH . J 4 HOH B 25 525 73 HOH HOH . J 4 HOH B 26 526 75 HOH HOH . J 4 HOH B 27 527 77 HOH HOH . J 4 HOH B 28 528 78 HOH HOH . J 4 HOH B 29 529 80 HOH HOH . J 4 HOH B 30 530 81 HOH HOH . J 4 HOH B 31 531 85 HOH HOH . J 4 HOH B 32 532 86 HOH HOH . J 4 HOH B 33 533 87 HOH HOH . J 4 HOH B 34 534 88 HOH HOH . J 4 HOH B 35 535 89 HOH HOH . J 4 HOH B 36 536 91 HOH HOH . J 4 HOH B 37 537 93 HOH HOH . J 4 HOH B 38 538 95 HOH HOH . J 4 HOH B 39 539 97 HOH HOH . J 4 HOH B 40 540 98 HOH HOH . J 4 HOH B 41 541 100 HOH HOH . J 4 HOH B 42 542 102 HOH HOH . J 4 HOH B 43 543 103 HOH HOH . J 4 HOH B 44 544 105 HOH HOH . J 4 HOH B 45 545 106 HOH HOH . J 4 HOH B 46 546 110 HOH HOH . J 4 HOH B 47 547 111 HOH HOH . J 4 HOH B 48 548 113 HOH HOH . J 4 HOH B 49 549 122 HOH HOH . J 4 HOH B 50 550 129 HOH HOH . J 4 HOH B 51 551 130 HOH HOH . J 4 HOH B 52 552 131 HOH HOH . J 4 HOH B 53 553 132 HOH HOH . J 4 HOH B 54 554 133 HOH HOH . J 4 HOH B 55 555 137 HOH HOH . J 4 HOH B 56 556 149 HOH HOH . J 4 HOH B 57 557 150 HOH HOH . J 4 HOH B 58 558 151 HOH HOH . J 4 HOH B 59 559 152 HOH HOH . J 4 HOH B 60 560 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -27.192 _atom_site.Cartn_y -23.414 _atom_site.Cartn_z -27.819 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #