data_3V7Q # _model_server_result.job_id totRWdAL8RSR7NhnyEOfhg _model_server_result.datetime_utc '2024-11-17 12:49:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3v7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 3V7Q # _exptl.entry_id 3V7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3V7Q _cell.length_a 50.407 _cell.length_b 61.291 _cell.length_c 94.16 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3V7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,I 1 1 B,F,G,J 2 1 C,H,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E K K . A K 202 1_555 I O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.157 ? metalc ? metalc2 E K K . A K 202 1_555 I O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc3 G K K . B K 902 1_555 J O HOH . B HOH 1027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3V7Q _atom_sites.fract_transf_matrix[1][1] 0.019839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01062 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CIT A 1 201 902 CIT CIT . E 3 K A 1 202 808 K K1 . F 2 CIT B 1 901 901 CIT CIT . G 3 K B 1 902 807 K K1 . H 2 CIT C 1 401 903 CIT CIT . I 4 HOH A 1 501 501 HOH HOH . I 4 HOH A 2 502 502 HOH HOH . I 4 HOH A 3 503 503 HOH HOH . I 4 HOH A 4 504 507 HOH HOH . I 4 HOH A 5 505 514 HOH HOH . I 4 HOH A 6 506 517 HOH HOH . I 4 HOH A 7 507 518 HOH HOH . I 4 HOH A 8 508 519 HOH HOH . I 4 HOH A 9 509 523 HOH HOH . I 4 HOH A 10 510 526 HOH HOH . I 4 HOH A 11 511 533 HOH HOH . I 4 HOH A 12 512 538 HOH HOH . I 4 HOH A 13 513 540 HOH HOH . I 4 HOH A 14 514 545 HOH HOH . I 4 HOH A 15 515 550 HOH HOH . I 4 HOH A 16 516 554 HOH HOH . I 4 HOH A 17 517 556 HOH HOH . I 4 HOH A 18 518 558 HOH HOH . I 4 HOH A 19 519 559 HOH HOH . I 4 HOH A 20 520 561 HOH HOH . I 4 HOH A 21 521 562 HOH HOH . I 4 HOH A 22 522 564 HOH HOH . I 4 HOH A 23 523 570 HOH HOH . I 4 HOH A 24 524 575 HOH HOH . I 4 HOH A 25 525 581 HOH HOH . I 4 HOH A 26 526 582 HOH HOH . I 4 HOH A 27 527 584 HOH HOH . I 4 HOH A 28 528 586 HOH HOH . I 4 HOH A 29 529 587 HOH HOH . I 4 HOH A 30 530 588 HOH HOH . I 4 HOH A 31 531 589 HOH HOH . I 4 HOH A 32 532 593 HOH HOH . I 4 HOH A 33 533 596 HOH HOH . I 4 HOH A 34 534 598 HOH HOH . I 4 HOH A 35 535 600 HOH HOH . I 4 HOH A 36 536 602 HOH HOH . I 4 HOH A 37 537 605 HOH HOH . I 4 HOH A 38 538 621 HOH HOH . I 4 HOH A 39 539 625 HOH HOH . I 4 HOH A 40 540 628 HOH HOH . I 4 HOH A 41 541 636 HOH HOH . I 4 HOH A 42 542 644 HOH HOH . I 4 HOH A 43 543 646 HOH HOH . I 4 HOH A 44 544 648 HOH HOH . I 4 HOH A 45 545 653 HOH HOH . I 4 HOH A 46 546 656 HOH HOH . I 4 HOH A 47 547 657 HOH HOH . I 4 HOH A 48 548 658 HOH HOH . I 4 HOH A 49 549 661 HOH HOH . I 4 HOH A 50 550 663 HOH HOH . I 4 HOH A 51 551 665 HOH HOH . I 4 HOH A 52 552 669 HOH HOH . I 4 HOH A 53 553 676 HOH HOH . I 4 HOH A 54 554 679 HOH HOH . I 4 HOH A 55 555 687 HOH HOH . I 4 HOH A 56 556 692 HOH HOH . I 4 HOH A 57 557 693 HOH HOH . I 4 HOH A 58 558 694 HOH HOH . I 4 HOH A 59 559 697 HOH HOH . I 4 HOH A 60 560 701 HOH HOH . I 4 HOH A 61 561 705 HOH HOH . I 4 HOH A 62 562 708 HOH HOH . I 4 HOH A 63 563 709 HOH HOH . I 4 HOH A 64 564 717 HOH HOH . I 4 HOH A 65 565 720 HOH HOH . I 4 HOH A 66 566 721 HOH HOH . I 4 HOH A 67 567 736 HOH HOH . I 4 HOH A 68 568 737 HOH HOH . I 4 HOH A 69 569 743 HOH HOH . I 4 HOH A 70 570 744 HOH HOH . I 4 HOH A 71 571 754 HOH HOH . I 4 HOH A 72 572 763 HOH HOH . I 4 HOH A 73 573 764 HOH HOH . I 4 HOH A 74 574 777 HOH HOH . I 4 HOH A 75 575 781 HOH HOH . I 4 HOH A 76 576 782 HOH HOH . I 4 HOH A 77 577 784 HOH HOH . I 4 HOH A 78 578 789 HOH HOH . I 4 HOH A 79 579 790 HOH HOH . I 4 HOH A 80 580 796 HOH HOH . I 4 HOH A 81 581 800 HOH HOH . I 4 HOH A 82 582 813 HOH HOH . I 4 HOH A 83 583 816 HOH HOH . I 4 HOH A 84 584 819 HOH HOH . I 4 HOH A 85 585 820 HOH HOH . I 4 HOH A 86 586 832 HOH HOH . I 4 HOH A 87 587 822 HOH HOH . I 4 HOH A 88 588 823 HOH HOH . I 4 HOH A 89 589 824 HOH HOH . I 4 HOH A 90 590 825 HOH HOH . I 4 HOH A 91 591 826 HOH HOH . I 4 HOH A 92 592 828 HOH HOH . I 4 HOH A 93 593 829 HOH HOH . I 4 HOH A 94 594 830 HOH HOH . J 4 HOH B 1 1001 510 HOH HOH . J 4 HOH B 2 1002 511 HOH HOH . J 4 HOH B 3 1003 513 HOH HOH . J 4 HOH B 4 1004 515 HOH HOH . J 4 HOH B 5 1005 522 HOH HOH . J 4 HOH B 6 1006 524 HOH HOH . J 4 HOH B 7 1007 529 HOH HOH . J 4 HOH B 8 1008 530 HOH HOH . J 4 HOH B 9 1009 531 HOH HOH . J 4 HOH B 10 1010 532 HOH HOH . J 4 HOH B 11 1011 541 HOH HOH . J 4 HOH B 12 1012 542 HOH HOH . J 4 HOH B 13 1013 547 HOH HOH . J 4 HOH B 14 1014 549 HOH HOH . J 4 HOH B 15 1015 555 HOH HOH . J 4 HOH B 16 1016 563 HOH HOH . J 4 HOH B 17 1017 568 HOH HOH . J 4 HOH B 18 1018 579 HOH HOH . J 4 HOH B 19 1019 585 HOH HOH . J 4 HOH B 20 1020 591 HOH HOH . J 4 HOH B 21 1021 597 HOH HOH . J 4 HOH B 22 1022 599 HOH HOH . J 4 HOH B 23 1023 606 HOH HOH . J 4 HOH B 24 1024 610 HOH HOH . J 4 HOH B 25 1025 614 HOH HOH . J 4 HOH B 26 1026 615 HOH HOH . J 4 HOH B 27 1027 616 HOH HOH . J 4 HOH B 28 1028 617 HOH HOH . J 4 HOH B 29 1029 619 HOH HOH . J 4 HOH B 30 1030 622 HOH HOH . J 4 HOH B 31 1031 624 HOH HOH . J 4 HOH B 32 1032 629 HOH HOH . J 4 HOH B 33 1033 633 HOH HOH . J 4 HOH B 34 1034 640 HOH HOH . J 4 HOH B 35 1035 643 HOH HOH . J 4 HOH B 36 1036 645 HOH HOH . J 4 HOH B 37 1037 650 HOH HOH . J 4 HOH B 38 1038 651 HOH HOH . J 4 HOH B 39 1039 662 HOH HOH . J 4 HOH B 40 1040 664 HOH HOH . J 4 HOH B 41 1041 667 HOH HOH . J 4 HOH B 42 1042 668 HOH HOH . J 4 HOH B 43 1043 670 HOH HOH . J 4 HOH B 44 1044 671 HOH HOH . J 4 HOH B 45 1045 672 HOH HOH . J 4 HOH B 46 1046 674 HOH HOH . J 4 HOH B 47 1047 680 HOH HOH . J 4 HOH B 48 1048 681 HOH HOH . J 4 HOH B 49 1049 683 HOH HOH . J 4 HOH B 50 1050 691 HOH HOH . J 4 HOH B 51 1051 696 HOH HOH . J 4 HOH B 52 1052 699 HOH HOH . J 4 HOH B 53 1053 707 HOH HOH . J 4 HOH B 54 1054 711 HOH HOH . J 4 HOH B 55 1055 712 HOH HOH . J 4 HOH B 56 1056 713 HOH HOH . J 4 HOH B 57 1057 715 HOH HOH . J 4 HOH B 58 1058 719 HOH HOH . J 4 HOH B 59 1059 731 HOH HOH . J 4 HOH B 60 1060 739 HOH HOH . J 4 HOH B 61 1061 740 HOH HOH . J 4 HOH B 62 1062 741 HOH HOH . J 4 HOH B 63 1063 742 HOH HOH . J 4 HOH B 64 1064 748 HOH HOH . J 4 HOH B 65 1065 751 HOH HOH . J 4 HOH B 66 1066 753 HOH HOH . J 4 HOH B 67 1067 755 HOH HOH . J 4 HOH B 68 1068 756 HOH HOH . J 4 HOH B 69 1069 757 HOH HOH . J 4 HOH B 70 1070 758 HOH HOH . J 4 HOH B 71 1071 765 HOH HOH . J 4 HOH B 72 1072 767 HOH HOH . J 4 HOH B 73 1073 768 HOH HOH . J 4 HOH B 74 1074 776 HOH HOH . J 4 HOH B 75 1075 779 HOH HOH . J 4 HOH B 76 1076 783 HOH HOH . J 4 HOH B 77 1077 787 HOH HOH . J 4 HOH B 78 1078 791 HOH HOH . J 4 HOH B 79 1079 798 HOH HOH . J 4 HOH B 80 1080 799 HOH HOH . J 4 HOH B 81 1081 804 HOH HOH . J 4 HOH B 82 1082 810 HOH HOH . J 4 HOH B 83 1083 812 HOH HOH . J 4 HOH B 84 1084 814 HOH HOH . J 4 HOH B 85 1085 817 HOH HOH . J 4 HOH B 86 1086 818 HOH HOH . J 4 HOH B 87 1087 821 HOH HOH . J 4 HOH B 88 1088 831 HOH HOH . K 4 HOH C 1 501 536 HOH HOH . K 4 HOH C 2 502 509 HOH HOH . K 4 HOH C 3 503 512 HOH HOH . K 4 HOH C 4 504 516 HOH HOH . K 4 HOH C 5 505 520 HOH HOH . K 4 HOH C 6 506 525 HOH HOH . K 4 HOH C 7 507 527 HOH HOH . K 4 HOH C 8 508 537 HOH HOH . K 4 HOH C 9 509 539 HOH HOH . K 4 HOH C 10 510 552 HOH HOH . K 4 HOH C 11 511 557 HOH HOH . K 4 HOH C 12 512 571 HOH HOH . K 4 HOH C 13 513 574 HOH HOH . K 4 HOH C 14 514 578 HOH HOH . K 4 HOH C 15 515 580 HOH HOH . K 4 HOH C 16 516 590 HOH HOH . K 4 HOH C 17 517 592 HOH HOH . K 4 HOH C 18 518 595 HOH HOH . K 4 HOH C 19 519 603 HOH HOH . K 4 HOH C 20 520 604 HOH HOH . K 4 HOH C 21 521 611 HOH HOH . K 4 HOH C 22 522 620 HOH HOH . K 4 HOH C 23 523 630 HOH HOH . K 4 HOH C 24 524 631 HOH HOH . K 4 HOH C 25 525 635 HOH HOH . K 4 HOH C 26 526 637 HOH HOH . K 4 HOH C 27 527 638 HOH HOH . K 4 HOH C 28 528 647 HOH HOH . K 4 HOH C 29 529 649 HOH HOH . K 4 HOH C 30 530 660 HOH HOH . K 4 HOH C 31 531 666 HOH HOH . K 4 HOH C 32 532 685 HOH HOH . K 4 HOH C 33 533 686 HOH HOH . K 4 HOH C 34 534 688 HOH HOH . K 4 HOH C 35 535 689 HOH HOH . K 4 HOH C 36 536 695 HOH HOH . K 4 HOH C 37 537 700 HOH HOH . K 4 HOH C 38 538 702 HOH HOH . K 4 HOH C 39 539 703 HOH HOH . K 4 HOH C 40 540 704 HOH HOH . K 4 HOH C 41 541 706 HOH HOH . K 4 HOH C 42 542 716 HOH HOH . K 4 HOH C 43 543 723 HOH HOH . K 4 HOH C 44 544 728 HOH HOH . K 4 HOH C 45 545 729 HOH HOH . K 4 HOH C 46 546 730 HOH HOH . K 4 HOH C 47 547 732 HOH HOH . K 4 HOH C 48 548 759 HOH HOH . K 4 HOH C 49 549 760 HOH HOH . K 4 HOH C 50 550 761 HOH HOH . K 4 HOH C 51 551 762 HOH HOH . K 4 HOH C 52 552 773 HOH HOH . K 4 HOH C 53 553 774 HOH HOH . K 4 HOH C 54 554 775 HOH HOH . K 4 HOH C 55 555 780 HOH HOH . K 4 HOH C 56 556 786 HOH HOH . K 4 HOH C 57 557 788 HOH HOH . K 4 HOH C 58 558 794 HOH HOH . K 4 HOH C 59 559 795 HOH HOH . K 4 HOH C 60 560 797 HOH HOH . K 4 HOH C 61 561 802 HOH HOH . K 4 HOH C 62 562 809 HOH HOH . K 4 HOH C 63 563 815 HOH HOH . K 4 HOH C 64 564 827 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . F 2 21.657 16.03 -47.696 1 18.46 ? C1 CIT 901 B 1 HETATM 2 O O1 CIT . . . F 2 20.379 15.785 -47.728 1 24.25 ? O1 CIT 901 B 1 HETATM 3 O O2 CIT . . . F 2 22.303 15.945 -46.561 1 17.91 ? O2 CIT 901 B 1 HETATM 4 C C2 CIT . . . F 2 22.344 16.397 -48.963 1 18.06 ? C2 CIT 901 B 1 HETATM 5 C C3 CIT . . . F 2 22.117 15.545 -50.256 1 21.6 ? C3 CIT 901 B 1 HETATM 6 O O7 CIT . . . F 2 22.38 14.184 -49.786 1 25.23 ? O7 CIT 901 B 1 HETATM 7 C C4 CIT . . . F 2 23.138 15.837 -51.335 1 25.33 ? C4 CIT 901 B 1 HETATM 8 C C5 CIT . . . F 2 23.098 15.107 -52.659 1 40.27 ? C5 CIT 901 B 1 HETATM 9 O O3 CIT . . . F 2 23.259 15.844 -53.764 1 32.63 ? O3 CIT 901 B 1 HETATM 10 O O4 CIT . . . F 2 22.931 13.898 -52.634 1 31.34 ? O4 CIT 901 B 1 HETATM 11 C C6 CIT . . . F 2 20.629 15.696 -50.811 1 40.81 ? C6 CIT 901 B 1 HETATM 12 O O5 CIT . . . F 2 19.92 14.564 -50.744 1 33.88 ? O5 CIT 901 B 1 HETATM 13 O O6 CIT . . . F 2 20.271 16.809 -51.239 1 38.61 ? O6 CIT 901 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #