data_3VA1 # _model_server_result.job_id DXidNWDfKzkcU5_p2lYRnQ _model_server_result.datetime_utc '2024-12-22 07:00:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3va1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 3VA1 # _exptl.entry_id 3VA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VA1 _cell.length_a 37.076 _cell.length_b 48.59 _cell.length_c 134.182 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3VA1 _atom_sites.fract_transf_matrix[1][1] 0.026972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02058 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 201 1 SO4 SO4 . D 2 SO4 B 1 201 2 SO4 SO4 . E 3 HOH A 1 301 1 HOH HOH . E 3 HOH A 2 302 2 HOH HOH . E 3 HOH A 3 303 3 HOH HOH . E 3 HOH A 4 304 5 HOH HOH . E 3 HOH A 5 305 7 HOH HOH . E 3 HOH A 6 306 11 HOH HOH . E 3 HOH A 7 307 12 HOH HOH . E 3 HOH A 8 308 14 HOH HOH . E 3 HOH A 9 309 15 HOH HOH . E 3 HOH A 10 310 16 HOH HOH . E 3 HOH A 11 311 17 HOH HOH . E 3 HOH A 12 312 18 HOH HOH . E 3 HOH A 13 313 19 HOH HOH . E 3 HOH A 14 314 21 HOH HOH . E 3 HOH A 15 315 22 HOH HOH . E 3 HOH A 16 316 24 HOH HOH . E 3 HOH A 17 317 28 HOH HOH . E 3 HOH A 18 318 30 HOH HOH . E 3 HOH A 19 319 32 HOH HOH . E 3 HOH A 20 320 33 HOH HOH . E 3 HOH A 21 321 39 HOH HOH . E 3 HOH A 22 322 40 HOH HOH . E 3 HOH A 23 323 45 HOH HOH . E 3 HOH A 24 324 47 HOH HOH . E 3 HOH A 25 325 49 HOH HOH . E 3 HOH A 26 326 50 HOH HOH . E 3 HOH A 27 327 51 HOH HOH . E 3 HOH A 28 328 52 HOH HOH . E 3 HOH A 29 329 54 HOH HOH . E 3 HOH A 30 330 56 HOH HOH . E 3 HOH A 31 331 57 HOH HOH . E 3 HOH A 32 332 58 HOH HOH . E 3 HOH A 33 333 59 HOH HOH . E 3 HOH A 34 334 60 HOH HOH . E 3 HOH A 35 335 62 HOH HOH . E 3 HOH A 36 336 63 HOH HOH . E 3 HOH A 37 337 64 HOH HOH . E 3 HOH A 38 338 66 HOH HOH . E 3 HOH A 39 339 71 HOH HOH . E 3 HOH A 40 340 72 HOH HOH . E 3 HOH A 41 341 73 HOH HOH . E 3 HOH A 42 342 74 HOH HOH . E 3 HOH A 43 343 77 HOH HOH . E 3 HOH A 44 344 78 HOH HOH . E 3 HOH A 45 345 79 HOH HOH . E 3 HOH A 46 346 82 HOH HOH . E 3 HOH A 47 347 83 HOH HOH . E 3 HOH A 48 348 85 HOH HOH . E 3 HOH A 49 349 86 HOH HOH . E 3 HOH A 50 350 87 HOH HOH . E 3 HOH A 51 351 88 HOH HOH . E 3 HOH A 52 352 89 HOH HOH . E 3 HOH A 53 353 92 HOH HOH . E 3 HOH A 54 354 93 HOH HOH . E 3 HOH A 55 355 97 HOH HOH . E 3 HOH A 56 356 98 HOH HOH . E 3 HOH A 57 357 100 HOH HOH . E 3 HOH A 58 358 102 HOH HOH . E 3 HOH A 59 359 104 HOH HOH . E 3 HOH A 60 360 107 HOH HOH . E 3 HOH A 61 361 111 HOH HOH . E 3 HOH A 62 362 113 HOH HOH . E 3 HOH A 63 363 115 HOH HOH . E 3 HOH A 64 364 117 HOH HOH . E 3 HOH A 65 365 118 HOH HOH . E 3 HOH A 66 366 120 HOH HOH . E 3 HOH A 67 367 121 HOH HOH . E 3 HOH A 68 368 122 HOH HOH . E 3 HOH A 69 369 123 HOH HOH . E 3 HOH A 70 370 124 HOH HOH . E 3 HOH A 71 371 125 HOH HOH . E 3 HOH A 72 372 126 HOH HOH . E 3 HOH A 73 373 129 HOH HOH . E 3 HOH A 74 374 130 HOH HOH . E 3 HOH A 75 375 131 HOH HOH . E 3 HOH A 76 376 132 HOH HOH . E 3 HOH A 77 377 136 HOH HOH . E 3 HOH A 78 378 138 HOH HOH . E 3 HOH A 79 379 140 HOH HOH . E 3 HOH A 80 380 142 HOH HOH . E 3 HOH A 81 381 143 HOH HOH . E 3 HOH A 82 382 144 HOH HOH . E 3 HOH A 83 383 145 HOH HOH . F 3 HOH B 1 301 4 HOH HOH . F 3 HOH B 2 302 6 HOH HOH . F 3 HOH B 3 303 8 HOH HOH . F 3 HOH B 4 304 9 HOH HOH . F 3 HOH B 5 305 10 HOH HOH . F 3 HOH B 6 306 13 HOH HOH . F 3 HOH B 7 307 20 HOH HOH . F 3 HOH B 8 308 23 HOH HOH . F 3 HOH B 9 309 25 HOH HOH . F 3 HOH B 10 310 26 HOH HOH . F 3 HOH B 11 311 27 HOH HOH . F 3 HOH B 12 312 29 HOH HOH . F 3 HOH B 13 313 31 HOH HOH . F 3 HOH B 14 314 34 HOH HOH . F 3 HOH B 15 315 35 HOH HOH . F 3 HOH B 16 316 36 HOH HOH . F 3 HOH B 17 317 37 HOH HOH . F 3 HOH B 18 318 38 HOH HOH . F 3 HOH B 19 319 41 HOH HOH . F 3 HOH B 20 320 42 HOH HOH . F 3 HOH B 21 321 43 HOH HOH . F 3 HOH B 22 322 44 HOH HOH . F 3 HOH B 23 323 46 HOH HOH . F 3 HOH B 24 324 48 HOH HOH . F 3 HOH B 25 325 53 HOH HOH . F 3 HOH B 26 326 55 HOH HOH . F 3 HOH B 27 327 61 HOH HOH . F 3 HOH B 28 328 65 HOH HOH . F 3 HOH B 29 329 67 HOH HOH . F 3 HOH B 30 330 68 HOH HOH . F 3 HOH B 31 331 69 HOH HOH . F 3 HOH B 32 332 70 HOH HOH . F 3 HOH B 33 333 75 HOH HOH . F 3 HOH B 34 334 76 HOH HOH . F 3 HOH B 35 335 80 HOH HOH . F 3 HOH B 36 336 81 HOH HOH . F 3 HOH B 37 337 84 HOH HOH . F 3 HOH B 38 338 90 HOH HOH . F 3 HOH B 39 339 91 HOH HOH . F 3 HOH B 40 340 94 HOH HOH . F 3 HOH B 41 341 95 HOH HOH . F 3 HOH B 42 342 96 HOH HOH . F 3 HOH B 43 343 99 HOH HOH . F 3 HOH B 44 344 101 HOH HOH . F 3 HOH B 45 345 103 HOH HOH . F 3 HOH B 46 346 105 HOH HOH . F 3 HOH B 47 347 106 HOH HOH . F 3 HOH B 48 348 108 HOH HOH . F 3 HOH B 49 349 109 HOH HOH . F 3 HOH B 50 350 110 HOH HOH . F 3 HOH B 51 351 112 HOH HOH . F 3 HOH B 52 352 114 HOH HOH . F 3 HOH B 53 353 116 HOH HOH . F 3 HOH B 54 354 119 HOH HOH . F 3 HOH B 55 355 127 HOH HOH . F 3 HOH B 56 356 128 HOH HOH . F 3 HOH B 57 357 133 HOH HOH . F 3 HOH B 58 358 134 HOH HOH . F 3 HOH B 59 359 135 HOH HOH . F 3 HOH B 60 360 137 HOH HOH . F 3 HOH B 61 361 139 HOH HOH . F 3 HOH B 62 362 141 HOH HOH . F 3 HOH B 63 363 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -19.866 11.938 -3.972 1 47.68 ? S SO4 201 B 1 HETATM 2 O O1 SO4 . . . D 2 -19.231 10.729 -4.567 1 45.75 ? O1 SO4 201 B 1 HETATM 3 O O2 SO4 . . . D 2 -21.251 12.11 -4.562 1 57.81 ? O2 SO4 201 B 1 HETATM 4 O O3 SO4 . . . D 2 -20.019 11.685 -2.526 1 50.73 ? O3 SO4 201 B 1 HETATM 5 O O4 SO4 . . . D 2 -19.188 13.212 -4.231 1 38.19 ? O4 SO4 201 B 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #