data_3VE4 # _model_server_result.job_id vmcgQ1owlXfydCll1vPkhQ _model_server_result.datetime_utc '2025-01-20 15:37:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ve4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 3VE4 # _exptl.entry_id 3VE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.158 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-HYDROXYCINNAMIC ACID" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VE4 _cell.length_a 66.833 _cell.length_b 66.833 _cell.length_c 40.947 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 69 A CYS 69 1_555 B C1 HC4 . A HC4 201 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.954 ? covale ? covale2 A SG CYS 69 A CYS 69 1_555 B C1 HC4 . A HC4 201 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.961 ? # _chem_comp.formula 'C9 H8 O3' _chem_comp.formula_weight 164.158 _chem_comp.id HC4 _chem_comp.mon_nstd_flag . _chem_comp.name "4'-HYDROXYCINNAMIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PARA-COUMARIC ACID' # _atom_sites.entry_id 3VE4 _atom_sites.fract_transf_matrix[1][1] 0.014963 _atom_sites.fract_transf_matrix[1][2] 0.008639 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024422 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HC4 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 169 _pdbx_nonpoly_scheme.pdb_mon_id HC4 _pdbx_nonpoly_scheme.auth_mon_id HC4 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HC4 . A . B 2 4.145 -11.781 6.155 0.51 14.36 ? C1 HC4 201 A 1 HETATM 2 C C1 HC4 . B . B 2 3.645 -12.107 6.233 0.49 7.62 ? C1 HC4 201 A 1 HETATM 3 O O1 HC4 . A . B 2 4.55 -12.751 5.437 0.51 19.01 ? O1 HC4 201 A 1 HETATM 4 O O1 HC4 . B . B 2 4.142 -12.574 7.316 0.49 2.46 ? O1 HC4 201 A 1 HETATM 5 C C2 HC4 . A . B 2 5.082 -11.229 7.035 0.51 3.66 ? C2 HC4 201 A 1 HETATM 6 C C2 HC4 . B . B 2 4.359 -12.382 5.055 0.49 6.56 ? C2 HC4 201 A 1 HETATM 7 C C3 HC4 . A . B 2 6.388 -11.504 7.227 0.51 3.82 ? C3 HC4 201 A 1 HETATM 8 C C3 HC4 . B . B 2 5.604 -12.86 4.875 0.49 16.56 ? C3 HC4 201 A 1 HETATM 9 C C1' HC4 . A . B 2 7.274 -12.421 6.74 0.51 12.73 ? C1' HC4 201 A 1 HETATM 10 C C1' HC4 . B . B 2 6.679 -13.221 5.64 0.49 1.14 ? C1' HC4 201 A 1 HETATM 11 C C2' HC4 . A . B 2 8.123 -13.124 7.591 0.51 13.29 ? C2' HC4 201 A 1 HETATM 12 C C2' HC4 . B . B 2 7.591 -14.14 5.147 0.49 1.06 ? C2' HC4 201 A 1 HETATM 13 C C3' HC4 . A . B 2 9.018 -14.062 7.069 0.51 11.3 ? C3' HC4 201 A 1 HETATM 14 C C3' HC4 . B . B 2 8.74 -14.491 5.848 0.49 4.48 ? C3' HC4 201 A 1 HETATM 15 C C4' HC4 . A . B 2 9.058 -14.307 5.703 0.51 5.23 ? C4' HC4 201 A 1 HETATM 16 C C4' HC4 . B . B 2 8.945 -13.878 7.087 0.49 11.08 ? C4' HC4 201 A 1 HETATM 17 C C5' HC4 . A . B 2 8.199 -13.613 4.857 0.51 14.82 ? C5' HC4 201 A 1 HETATM 18 C C5' HC4 . B . B 2 8.039 -12.945 7.595 0.49 12.22 ? C5' HC4 201 A 1 HETATM 19 C C6' HC4 . A . B 2 7.335 -12.681 5.373 0.51 19.39 ? C6' HC4 201 A 1 HETATM 20 C C6' HC4 . B . B 2 6.901 -12.606 6.881 0.49 11.18 ? C6' HC4 201 A 1 HETATM 21 O O4' HC4 . A . B 2 9.926 -15.168 5.132 0.51 3.8 ? O4' HC4 201 A 1 HETATM 22 O O4' HC4 . B . B 2 10.018 -14.202 7.847 0.49 10.31 ? O4' HC4 201 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 943 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #