data_3VF5 # _model_server_result.job_id X_xQQTAzBQl4EQSZGlvqiw _model_server_result.datetime_utc '2024-11-15 06:38:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vf5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 3VF5 # _exptl.entry_id 3VF5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VF5 _cell.length_a 58.203 _cell.length_b 86.394 _cell.length_c 45.946 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 60 A ASP 60 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc2 C NA NA . A NA 501 1_555 M O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc3 C NA NA . A NA 501 1_555 M O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc4 C NA NA . A NA 501 1_555 M O HOH . A HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc5 C NA NA . A NA 501 1_555 M O HOH . A HOH 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc6 C NA NA . A NA 501 1_555 M O HOH . A HOH 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc7 B O ASP 60 B ASP 60 1_555 I NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc8 I NA NA . B NA 202 1_555 N O HOH . B HOH 1064 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc9 I NA NA . B NA 202 1_555 N O HOH . B HOH 1065 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc10 I NA NA . B NA 202 1_555 N O HOH . B HOH 1090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3VF5 _atom_sites.fract_transf_matrix[1][1] 0.017181 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 501 501 NA NA . D 3 CL A 1 502 512 CL CL . E 3 CL A 1 503 514 CL CL . F 4 ACT A 1 504 521 ACT ACT . G 4 ACT A 1 505 522 ACT ACT . H 5 031 B 1 201 201 031 031 . I 2 NA B 1 202 502 NA NA . J 3 CL B 1 203 511 CL CL . K 3 CL B 1 204 513 CL CL . L 6 GOL B 1 205 531 GOL GOL . M 7 HOH A 1 601 1003 HOH HOH . M 7 HOH A 2 602 1008 HOH HOH . M 7 HOH A 3 603 1009 HOH HOH . M 7 HOH A 4 604 1010 HOH HOH . M 7 HOH A 5 605 1013 HOH HOH . M 7 HOH A 6 606 1015 HOH HOH . M 7 HOH A 7 607 1016 HOH HOH . M 7 HOH A 8 608 1019 HOH HOH . M 7 HOH A 9 609 1024 HOH HOH . M 7 HOH A 10 610 1026 HOH HOH . M 7 HOH A 11 611 1028 HOH HOH . M 7 HOH A 12 612 1035 HOH HOH . M 7 HOH A 13 613 1036 HOH HOH . M 7 HOH A 14 614 1038 HOH HOH . M 7 HOH A 15 615 1039 HOH HOH . M 7 HOH A 16 616 1041 HOH HOH . M 7 HOH A 17 617 1049 HOH HOH . M 7 HOH A 18 618 1051 HOH HOH . M 7 HOH A 19 619 1052 HOH HOH . M 7 HOH A 20 620 1055 HOH HOH . M 7 HOH A 21 621 1056 HOH HOH . M 7 HOH A 22 622 1057 HOH HOH . M 7 HOH A 23 623 1058 HOH HOH . M 7 HOH A 24 624 1059 HOH HOH . M 7 HOH A 25 625 1060 HOH HOH . M 7 HOH A 26 626 1063 HOH HOH . M 7 HOH A 27 627 1064 HOH HOH . M 7 HOH A 28 628 1067 HOH HOH . M 7 HOH A 29 629 1068 HOH HOH . M 7 HOH A 30 630 1069 HOH HOH . M 7 HOH A 31 631 1070 HOH HOH . M 7 HOH A 32 632 1071 HOH HOH . M 7 HOH A 33 633 1072 HOH HOH . M 7 HOH A 34 634 1073 HOH HOH . M 7 HOH A 35 635 1078 HOH HOH . M 7 HOH A 36 636 1080 HOH HOH . M 7 HOH A 37 637 1081 HOH HOH . M 7 HOH A 38 638 1083 HOH HOH . M 7 HOH A 39 639 1086 HOH HOH . M 7 HOH A 40 640 1089 HOH HOH . M 7 HOH A 41 641 1093 HOH HOH . M 7 HOH A 42 642 1094 HOH HOH . M 7 HOH A 43 643 1095 HOH HOH . M 7 HOH A 44 644 1096 HOH HOH . M 7 HOH A 45 645 1097 HOH HOH . M 7 HOH A 46 646 1099 HOH HOH . M 7 HOH A 47 647 1100 HOH HOH . M 7 HOH A 48 648 1101 HOH HOH . M 7 HOH A 49 649 1104 HOH HOH . M 7 HOH A 50 650 1105 HOH HOH . M 7 HOH A 51 651 1113 HOH HOH . M 7 HOH A 52 652 1115 HOH HOH . M 7 HOH A 53 653 1122 HOH HOH . M 7 HOH A 54 654 1125 HOH HOH . M 7 HOH A 55 655 1126 HOH HOH . M 7 HOH A 56 656 1130 HOH HOH . M 7 HOH A 57 657 1132 HOH HOH . M 7 HOH A 58 658 1136 HOH HOH . M 7 HOH A 59 659 1137 HOH HOH . M 7 HOH A 60 660 1140 HOH HOH . M 7 HOH A 61 661 1144 HOH HOH . M 7 HOH A 62 662 1145 HOH HOH . M 7 HOH A 63 663 1148 HOH HOH . M 7 HOH A 64 664 1158 HOH HOH . M 7 HOH A 65 665 1159 HOH HOH . M 7 HOH A 66 666 1160 HOH HOH . M 7 HOH A 67 667 1164 HOH HOH . M 7 HOH A 68 668 1169 HOH HOH . M 7 HOH A 69 669 1170 HOH HOH . M 7 HOH A 70 670 1174 HOH HOH . M 7 HOH A 71 671 1176 HOH HOH . M 7 HOH A 72 672 1179 HOH HOH . M 7 HOH A 73 673 1180 HOH HOH . M 7 HOH A 74 674 1181 HOH HOH . M 7 HOH A 75 675 1182 HOH HOH . M 7 HOH A 76 676 1201 HOH HOH . M 7 HOH A 77 677 1202 HOH HOH . M 7 HOH A 78 678 1203 HOH HOH . M 7 HOH A 79 679 1208 HOH HOH . M 7 HOH A 80 680 1212 HOH HOH . M 7 HOH A 81 681 1214 HOH HOH . M 7 HOH A 82 682 1222 HOH HOH . M 7 HOH A 83 683 1224 HOH HOH . M 7 HOH A 84 684 1225 HOH HOH . M 7 HOH A 85 685 1226 HOH HOH . M 7 HOH A 86 686 1227 HOH HOH . M 7 HOH A 87 687 1228 HOH HOH . M 7 HOH A 88 688 1230 HOH HOH . M 7 HOH A 89 689 1231 HOH HOH . M 7 HOH A 90 690 1232 HOH HOH . N 7 HOH B 1 1001 1001 HOH HOH . N 7 HOH B 2 1002 1002 HOH HOH . N 7 HOH B 3 1003 1004 HOH HOH . N 7 HOH B 4 1004 1005 HOH HOH . N 7 HOH B 5 1005 1006 HOH HOH . N 7 HOH B 6 1006 1007 HOH HOH . N 7 HOH B 7 1007 1011 HOH HOH . N 7 HOH B 8 1008 1012 HOH HOH . N 7 HOH B 9 1009 1014 HOH HOH . N 7 HOH B 10 1010 1017 HOH HOH . N 7 HOH B 11 1011 1018 HOH HOH . N 7 HOH B 12 1012 1020 HOH HOH . N 7 HOH B 13 1013 1021 HOH HOH . N 7 HOH B 14 1014 1022 HOH HOH . N 7 HOH B 15 1015 1023 HOH HOH . N 7 HOH B 16 1016 1025 HOH HOH . N 7 HOH B 17 1017 1027 HOH HOH . N 7 HOH B 18 1018 1029 HOH HOH . N 7 HOH B 19 1019 1030 HOH HOH . N 7 HOH B 20 1020 1031 HOH HOH . N 7 HOH B 21 1021 1032 HOH HOH . N 7 HOH B 22 1022 1033 HOH HOH . N 7 HOH B 23 1023 1034 HOH HOH . N 7 HOH B 24 1024 1037 HOH HOH . N 7 HOH B 25 1025 1040 HOH HOH . N 7 HOH B 26 1026 1042 HOH HOH . N 7 HOH B 27 1027 1043 HOH HOH . N 7 HOH B 28 1028 1044 HOH HOH . N 7 HOH B 29 1029 1045 HOH HOH . N 7 HOH B 30 1030 1046 HOH HOH . N 7 HOH B 31 1031 1047 HOH HOH . N 7 HOH B 32 1032 1048 HOH HOH . N 7 HOH B 33 1033 1050 HOH HOH . N 7 HOH B 34 1034 1053 HOH HOH . N 7 HOH B 35 1035 1054 HOH HOH . N 7 HOH B 36 1036 1061 HOH HOH . N 7 HOH B 37 1037 1062 HOH HOH . N 7 HOH B 38 1038 1065 HOH HOH . N 7 HOH B 39 1039 1066 HOH HOH . N 7 HOH B 40 1040 1074 HOH HOH . N 7 HOH B 41 1041 1075 HOH HOH . N 7 HOH B 42 1042 1076 HOH HOH . N 7 HOH B 43 1043 1077 HOH HOH . N 7 HOH B 44 1044 1079 HOH HOH . N 7 HOH B 45 1045 1082 HOH HOH . N 7 HOH B 46 1046 1084 HOH HOH . N 7 HOH B 47 1047 1085 HOH HOH . N 7 HOH B 48 1048 1087 HOH HOH . N 7 HOH B 49 1049 1088 HOH HOH . N 7 HOH B 50 1050 1090 HOH HOH . N 7 HOH B 51 1051 1091 HOH HOH . N 7 HOH B 52 1052 1092 HOH HOH . N 7 HOH B 53 1053 1098 HOH HOH . N 7 HOH B 54 1054 1102 HOH HOH . N 7 HOH B 55 1055 1103 HOH HOH . N 7 HOH B 56 1056 1106 HOH HOH . N 7 HOH B 57 1057 1107 HOH HOH . N 7 HOH B 58 1058 1108 HOH HOH . N 7 HOH B 59 1059 1109 HOH HOH . N 7 HOH B 60 1060 1110 HOH HOH . N 7 HOH B 61 1061 1111 HOH HOH . N 7 HOH B 62 1062 1116 HOH HOH . N 7 HOH B 63 1063 1119 HOH HOH . N 7 HOH B 64 1064 1120 HOH HOH . N 7 HOH B 65 1065 1121 HOH HOH . N 7 HOH B 66 1066 1123 HOH HOH . N 7 HOH B 67 1067 1124 HOH HOH . N 7 HOH B 68 1068 1127 HOH HOH . N 7 HOH B 69 1069 1128 HOH HOH . N 7 HOH B 70 1070 1129 HOH HOH . N 7 HOH B 71 1071 1133 HOH HOH . N 7 HOH B 72 1072 1134 HOH HOH . N 7 HOH B 73 1073 1135 HOH HOH . N 7 HOH B 74 1074 1138 HOH HOH . N 7 HOH B 75 1075 1142 HOH HOH . N 7 HOH B 76 1076 1147 HOH HOH . N 7 HOH B 77 1077 1149 HOH HOH . N 7 HOH B 78 1078 1151 HOH HOH . N 7 HOH B 79 1079 1152 HOH HOH . N 7 HOH B 80 1080 1154 HOH HOH . N 7 HOH B 81 1081 1155 HOH HOH . N 7 HOH B 82 1082 1156 HOH HOH . N 7 HOH B 83 1083 1161 HOH HOH . N 7 HOH B 84 1084 1162 HOH HOH . N 7 HOH B 85 1085 1163 HOH HOH . N 7 HOH B 86 1086 1165 HOH HOH . N 7 HOH B 87 1087 1166 HOH HOH . N 7 HOH B 88 1088 1172 HOH HOH . N 7 HOH B 89 1089 1173 HOH HOH . N 7 HOH B 90 1090 1183 HOH HOH . N 7 HOH B 91 1091 1184 HOH HOH . N 7 HOH B 92 1092 1185 HOH HOH . N 7 HOH B 93 1093 1186 HOH HOH . N 7 HOH B 94 1094 1187 HOH HOH . N 7 HOH B 95 1095 1188 HOH HOH . N 7 HOH B 96 1096 1191 HOH HOH . N 7 HOH B 97 1097 1192 HOH HOH . N 7 HOH B 98 1098 1193 HOH HOH . N 7 HOH B 99 1099 1194 HOH HOH . N 7 HOH B 100 1100 1195 HOH HOH . N 7 HOH B 101 1101 1198 HOH HOH . N 7 HOH B 102 1102 1200 HOH HOH . N 7 HOH B 103 1103 1205 HOH HOH . N 7 HOH B 104 1104 1206 HOH HOH . N 7 HOH B 105 1105 1207 HOH HOH . N 7 HOH B 106 1106 1210 HOH HOH . N 7 HOH B 107 1107 1213 HOH HOH . N 7 HOH B 108 1108 1216 HOH HOH . N 7 HOH B 109 1109 1218 HOH HOH . N 7 HOH B 110 1110 1219 HOH HOH . N 7 HOH B 111 1111 1229 HOH HOH . N 7 HOH B 112 1112 1233 HOH HOH . N 7 HOH B 113 1113 1234 HOH HOH . N 7 HOH B 114 1114 1235 HOH HOH . N 7 HOH B 115 1115 1236 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -3.484 _atom_site.Cartn_y -16.824 _atom_site.Cartn_z 15.835 _atom_site.occupancy 0.7 _atom_site.B_iso_or_equiv 25.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #