data_3VF9 # _model_server_result.job_id x4-oWCqC8JY4jofbSO1zNQ _model_server_result.datetime_utc '2024-12-22 01:55:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vf9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 3VF9 # _exptl.entry_id 3VF9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.435 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{2-[5-(difluoromethyl)-2H-thieno[3,2-c]pyrazol-3-yl]-1H-indol-6-yl}pentan-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VF9 _cell.length_a 39.813 _cell.length_b 84.739 _cell.length_c 90.184 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H19 F2 N3 O S' _chem_comp.formula_weight 375.435 _chem_comp.id 477 _chem_comp.mon_nstd_flag . _chem_comp.name 3-{2-[5-(difluoromethyl)-2H-thieno[3,2-c]pyrazol-3-yl]-1H-indol-6-yl}pentan-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAZ CAV 477 sing 1 n n FAY CAV 477 sing 2 n n CAV CAP 477 sing 3 n n CAP CAQ 477 doub 4 n y CAP SAO 477 sing 5 n y CAQ CAM 477 sing 6 n y CAM NAA 477 doub 7 n y CAM CAN 477 sing 8 n y SAO CAN 477 sing 9 n y NAA NAB 477 sing 10 n y CAN CAC 477 doub 11 n y NAB CAC 477 sing 12 n y CAC CAD 477 sing 13 n n CAD CAF 477 doub 14 n y CAD NAE 477 sing 15 n y CAF CAG 477 sing 16 n y NAE CAH 477 sing 17 n y CAG CAH 477 doub 18 n y CAG CAL 477 sing 19 n y CAH CAI 477 sing 20 n y CAL CAK 477 doub 21 n y CAI CAJ 477 doub 22 n y CAK CAJ 477 sing 23 n y CAJ CAR 477 sing 24 n n CAU CAT 477 sing 25 n n CAR CAT 477 sing 26 n n CAR OAS 477 sing 27 n n CAR CAW 477 sing 28 n n CAW CAX 477 sing 29 n n CAU H1 477 sing 30 n n CAU H2 477 sing 31 n n CAU H3 477 sing 32 n n CAT H4 477 sing 33 n n CAT H5 477 sing 34 n n CAW H6 477 sing 35 n n CAW H7 477 sing 36 n n CAX H8 477 sing 37 n n CAX H9 477 sing 38 n n CAX H10 477 sing 39 n n OAS H11 477 sing 40 n n CAI H12 477 sing 41 n n CAK H13 477 sing 42 n n CAL H14 477 sing 43 n n CAF H15 477 sing 44 n n NAE H16 477 sing 45 n n NAB H17 477 sing 46 n n CAQ H18 477 sing 47 n n CAV H19 477 sing 48 n n # _atom_sites.entry_id 3VF9 _atom_sites.fract_transf_matrix[1][1] 0.025117 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011801 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 477 A 1 701 1 477 027 . C 3 HOH A 1 801 1 HOH HOH . C 3 HOH A 2 802 2 HOH HOH . C 3 HOH A 3 803 3 HOH HOH . C 3 HOH A 4 804 4 HOH HOH . C 3 HOH A 5 805 5 HOH HOH . C 3 HOH A 6 806 6 HOH HOH . C 3 HOH A 7 807 7 HOH HOH . C 3 HOH A 8 808 8 HOH HOH . C 3 HOH A 9 809 9 HOH HOH . C 3 HOH A 10 810 10 HOH HOH . C 3 HOH A 11 811 12 HOH HOH . C 3 HOH A 12 812 13 HOH HOH . C 3 HOH A 13 813 14 HOH HOH . C 3 HOH A 14 814 15 HOH HOH . C 3 HOH A 15 815 16 HOH HOH . C 3 HOH A 16 816 17 HOH HOH . C 3 HOH A 17 817 18 HOH HOH . C 3 HOH A 18 818 19 HOH HOH . C 3 HOH A 19 819 20 HOH HOH . C 3 HOH A 20 820 21 HOH HOH . C 3 HOH A 21 821 22 HOH HOH . C 3 HOH A 22 822 23 HOH HOH . C 3 HOH A 23 823 24 HOH HOH . C 3 HOH A 24 824 25 HOH HOH . C 3 HOH A 25 825 26 HOH HOH . C 3 HOH A 26 826 27 HOH HOH . C 3 HOH A 27 827 28 HOH HOH . C 3 HOH A 28 828 29 HOH HOH . C 3 HOH A 29 829 30 HOH HOH . C 3 HOH A 30 830 31 HOH HOH . C 3 HOH A 31 831 32 HOH HOH . C 3 HOH A 32 832 33 HOH HOH . C 3 HOH A 33 833 34 HOH HOH . C 3 HOH A 34 834 35 HOH HOH . C 3 HOH A 35 835 37 HOH HOH . C 3 HOH A 36 836 38 HOH HOH . C 3 HOH A 37 837 39 HOH HOH . C 3 HOH A 38 838 40 HOH HOH . C 3 HOH A 39 839 41 HOH HOH . C 3 HOH A 40 840 42 HOH HOH . C 3 HOH A 41 841 43 HOH HOH . C 3 HOH A 42 842 44 HOH HOH . C 3 HOH A 43 843 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAT 477 . . . B 2 4.687 -3.181 -15.269 1 30.59 ? CAT 477 701 A 1 HETATM 2 C CAR 477 . . . B 2 3.394 -3.647 -15.946 1 51.3 ? CAR 477 701 A 1 HETATM 3 C CAW 477 . . . B 2 3.056 -5.067 -15.483 1 41.06 ? CAW 477 701 A 1 HETATM 4 O OAS 477 . . . B 2 3.557 -3.626 -17.367 1 52.21 ? OAS 477 701 A 1 HETATM 5 C CAJ 477 . . . B 2 2.221 -2.72 -15.57 1 35.88 ? CAJ 477 701 A 1 HETATM 6 C CAI 477 . . . B 2 0.957 -2.949 -16.123 1 46.11 ? CAI 477 701 A 1 HETATM 7 C CAK 477 . . . B 2 2.394 -1.661 -14.671 1 32.23 ? CAK 477 701 A 1 HETATM 8 C CAL 477 . . . B 2 1.321 -0.835 -14.333 1 53.67 ? CAL 477 701 A 1 HETATM 9 C CAG 477 . . . B 2 0.065 -1.069 -14.893 1 25.69 ? CAG 477 701 A 1 HETATM 10 C CAF 477 . . . B 2 -1.11 -0.462 -14.759 1 35.25 ? CAF 477 701 A 1 HETATM 11 C CAH 477 . . . B 2 -0.115 -2.118 -15.788 1 38.08 ? CAH 477 701 A 1 HETATM 12 N NAE 477 . . . B 2 -1.391 -2.096 -16.158 1 35.47 ? NAE 477 701 A 1 HETATM 13 C CAD 477 . . . B 2 -2.002 -1.091 -15.527 1 41.46 ? CAD 477 701 A 1 HETATM 14 C CAC 477 . . . B 2 -3.35 -0.765 -15.667 1 21.44 ? CAC 477 701 A 1 HETATM 15 N NAB 477 . . . B 2 -4.252 -1.315 -16.476 1 25.88 ? NAB 477 701 A 1 HETATM 16 N NAA 477 . . . B 2 -5.352 -0.767 -16.328 1 41.5 ? NAA 477 701 A 1 HETATM 17 C CAM 477 . . . B 2 -5.32 0.191 -15.393 1 21.46 ? CAM 477 701 A 1 HETATM 18 C CAQ 477 . . . B 2 -6.111 1.102 -14.784 1 30.52 ? CAQ 477 701 A 1 HETATM 19 C CAN 477 . . . B 2 -4.008 0.202 -14.928 1 26.34 ? CAN 477 701 A 1 HETATM 20 S SAO 477 . . . B 2 -3.91 1.413 -13.765 1 37.94 ? SAO 477 701 A 1 HETATM 21 C CAP 477 . . . B 2 -5.533 1.875 -13.851 1 35.83 ? CAP 477 701 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 21 #