data_3VG9 # _model_server_result.job_id fUAEEgY7L0E4IFXUgeEsSQ _model_server_result.datetime_utc '2024-12-22 08:05:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vg9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 3VG9 # _exptl.entry_id 3VG9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.336 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.1 _cell.angle_gamma 90 _cell.entry_id 3VG9 _cell.length_a 121.18 _cell.length_b 90.15 _cell.length_c 113.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VG9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 71 A CYS 71 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 74 A CYS 74 1_555 A SG CYS 146 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 77 A CYS 77 1_555 A SG CYS 166 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf4 A SG CYS 259 A CYS 259 1_555 A SG CYS 262 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? disulf ? disulf5 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf6 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 C SG CYS 151 C CYS 151 1_555 C SG CYS 206 C CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C16 H15 N7 O2' _chem_comp.formula_weight 337.336 _chem_comp.id ZMA _chem_comp.mon_nstd_flag . _chem_comp.name 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C1 ZMA doub 513 n y C1 C2 ZMA sing 514 n y C1 H1 ZMA sing 515 n n C2 C3 ZMA doub 516 n y C2 H2 ZMA sing 517 n n C5 C3 ZMA sing 518 n y C3 O4 ZMA sing 519 n n O4 HO4 ZMA sing 520 n n C6 C5 ZMA doub 521 n y C5 H5 ZMA sing 522 n n C7 C6 ZMA sing 523 n y C6 H6 ZMA sing 524 n n C8 C7 ZMA sing 525 n n C9 C8 ZMA sing 526 n n C8 H8 ZMA sing 527 n n C8 H8A ZMA sing 528 n n N10 C9 ZMA sing 529 n n C9 H9 ZMA sing 530 n n C9 H9A ZMA sing 531 n n C11 N10 ZMA sing 532 n n N10 HN10 ZMA sing 533 n n N12 C11 ZMA doub 534 n y C11 N13 ZMA sing 535 n y C18 N12 ZMA sing 536 n y C14 N13 ZMA doub 537 n y N16 C14 ZMA sing 538 n y C14 N15 ZMA sing 539 n n N15 HN15 ZMA sing 540 n n N15 HN1A ZMA sing 541 n n N17 N16 ZMA sing 542 n y C18 N16 ZMA sing 543 n y C20 N17 ZMA doub 544 n y N19 C18 ZMA doub 545 n y C20 N19 ZMA sing 546 n y C21 C20 ZMA sing 547 n y C22 C21 ZMA doub 548 n y O25 C21 ZMA sing 549 n y C23 C22 ZMA sing 550 n y C22 H22 ZMA sing 551 n n C23 C24 ZMA doub 552 n y C23 H23 ZMA sing 553 n n C24 O25 ZMA sing 554 n y C24 H24 ZMA sing 555 n n # _atom_sites.entry_id 3VG9 _atom_sites.fract_transf_matrix[1][1] 0.008252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001174 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZMA A 1 401 401 ZMA ZMA . E 5 STE A 1 402 402 STE STE . F 5 STE A 1 403 403 STE STE . G 5 STE A 1 404 404 STE STE . H 5 STE A 1 405 405 STE STE . I 5 STE A 1 406 406 STE STE . J 5 STE A 1 407 407 STE STE . K 6 LMT A 1 408 408 LMT LMT . L 7 HOH A 1 327 2 HOH HOH . L 7 HOH A 2 328 35 HOH HOH . L 7 HOH A 3 329 36 HOH HOH . L 7 HOH A 4 330 53 HOH HOH . L 7 HOH A 5 331 54 HOH HOH . L 7 HOH A 6 332 55 HOH HOH . L 7 HOH A 7 333 61 HOH HOH . M 7 HOH B 1 215 7 HOH HOH . M 7 HOH B 2 216 12 HOH HOH . M 7 HOH B 3 217 13 HOH HOH . M 7 HOH B 4 218 14 HOH HOH . M 7 HOH B 5 219 20 HOH HOH . M 7 HOH B 6 220 21 HOH HOH . M 7 HOH B 7 221 24 HOH HOH . M 7 HOH B 8 222 26 HOH HOH . M 7 HOH B 9 223 27 HOH HOH . M 7 HOH B 10 224 29 HOH HOH . M 7 HOH B 11 225 30 HOH HOH . M 7 HOH B 12 226 31 HOH HOH . M 7 HOH B 13 227 33 HOH HOH . M 7 HOH B 14 228 42 HOH HOH . M 7 HOH B 15 229 43 HOH HOH . M 7 HOH B 16 230 44 HOH HOH . M 7 HOH B 17 231 47 HOH HOH . M 7 HOH B 18 232 50 HOH HOH . M 7 HOH B 19 233 56 HOH HOH . M 7 HOH B 20 234 57 HOH HOH . M 7 HOH B 21 235 66 HOH HOH . M 7 HOH B 22 236 69 HOH HOH . M 7 HOH B 23 237 70 HOH HOH . M 7 HOH B 24 238 71 HOH HOH . N 7 HOH C 1 227 1 HOH HOH . N 7 HOH C 2 228 3 HOH HOH . N 7 HOH C 3 229 4 HOH HOH . N 7 HOH C 4 230 5 HOH HOH . N 7 HOH C 5 231 6 HOH HOH . N 7 HOH C 6 232 8 HOH HOH . N 7 HOH C 7 233 9 HOH HOH . N 7 HOH C 8 234 10 HOH HOH . N 7 HOH C 9 235 235 HOH HOH . N 7 HOH C 10 236 15 HOH HOH . N 7 HOH C 11 237 16 HOH HOH . N 7 HOH C 12 238 17 HOH HOH . N 7 HOH C 13 239 18 HOH HOH . N 7 HOH C 14 240 19 HOH HOH . N 7 HOH C 15 241 25 HOH HOH . N 7 HOH C 16 242 28 HOH HOH . N 7 HOH C 17 243 34 HOH HOH . N 7 HOH C 18 244 38 HOH HOH . N 7 HOH C 19 245 39 HOH HOH . N 7 HOH C 20 246 40 HOH HOH . N 7 HOH C 21 247 41 HOH HOH . N 7 HOH C 22 248 45 HOH HOH . N 7 HOH C 23 249 46 HOH HOH . N 7 HOH C 24 250 48 HOH HOH . N 7 HOH C 25 251 49 HOH HOH . N 7 HOH C 26 252 51 HOH HOH . N 7 HOH C 27 253 52 HOH HOH . N 7 HOH C 28 254 58 HOH HOH . N 7 HOH C 29 255 59 HOH HOH . N 7 HOH C 30 256 60 HOH HOH . N 7 HOH C 31 257 62 HOH HOH . N 7 HOH C 32 258 63 HOH HOH . N 7 HOH C 33 259 64 HOH HOH . N 7 HOH C 34 260 65 HOH HOH . N 7 HOH C 35 261 67 HOH HOH . N 7 HOH C 36 262 68 HOH HOH . N 7 HOH C 37 263 72 HOH HOH . N 7 HOH C 38 264 73 HOH HOH . N 7 HOH C 39 265 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZMA . . . D 4 -79.943 -16.409 -50.273 1 194.23 ? C1 ZMA 401 A 1 HETATM 2 C C2 ZMA . . . D 4 -80.324 -16.862 -51.523 1 194.68 ? C2 ZMA 401 A 1 HETATM 3 C C3 ZMA . . . D 4 -79.612 -17.886 -52.129 1 195.56 ? C3 ZMA 401 A 1 HETATM 4 O O4 ZMA . . . D 4 -79.992 -18.335 -53.373 1 198.55 ? O4 ZMA 401 A 1 HETATM 5 C C5 ZMA . . . D 4 -78.523 -18.459 -51.487 1 193.96 ? C5 ZMA 401 A 1 HETATM 6 C C6 ZMA . . . D 4 -78.141 -18.005 -50.235 1 193.11 ? C6 ZMA 401 A 1 HETATM 7 C C7 ZMA . . . D 4 -78.854 -16.981 -49.629 1 189.92 ? C7 ZMA 401 A 1 HETATM 8 C C8 ZMA . . . D 4 -78.462 -16.48 -48.29 1 178.06 ? C8 ZMA 401 A 1 HETATM 9 C C9 ZMA . . . D 4 -78.17 -15.023 -48.205 1 169.8 ? C9 ZMA 401 A 1 HETATM 10 N N10 ZMA . . . D 4 -77.364 -14.582 -47.134 1 166.03 ? N10 ZMA 401 A 1 HETATM 11 C C11 ZMA . . . D 4 -76.247 -13.76 -47.425 1 163.46 ? C11 ZMA 401 A 1 HETATM 12 N N12 ZMA . . . D 4 -75.489 -13.277 -46.424 1 166.33 ? N12 ZMA 401 A 1 HETATM 13 N N13 ZMA . . . D 4 -75.946 -13.474 -48.713 1 156.35 ? N13 ZMA 401 A 1 HETATM 14 C C14 ZMA . . . D 4 -74.88 -12.698 -48.994 1 156.13 ? C14 ZMA 401 A 1 HETATM 15 N N15 ZMA . . . D 4 -74.564 -12.393 -50.356 1 149.89 ? N15 ZMA 401 A 1 HETATM 16 N N16 ZMA . . . D 4 -74.102 -12.204 -47.973 1 163.87 ? N16 ZMA 401 A 1 HETATM 17 N N17 ZMA . . . D 4 -72.964 -11.389 -47.966 1 165.14 ? N17 ZMA 401 A 1 HETATM 18 C C18 ZMA . . . D 4 -74.401 -12.487 -46.707 1 164.39 ? C18 ZMA 401 A 1 HETATM 19 N N19 ZMA . . . D 4 -73.47 -11.865 -45.902 1 161.18 ? N19 ZMA 401 A 1 HETATM 20 C C20 ZMA . . . D 4 -72.595 -11.201 -46.681 1 161.69 ? C20 ZMA 401 A 1 HETATM 21 C C21 ZMA . . . D 4 -71.527 -10.447 -46.247 1 157.52 ? C21 ZMA 401 A 1 HETATM 22 C C22 ZMA . . . D 4 -71.383 -9.913 -44.978 1 152.84 ? C22 ZMA 401 A 1 HETATM 23 C C23 ZMA . . . D 4 -70.187 -9.221 -44.97 1 151.29 ? C23 ZMA 401 A 1 HETATM 24 C C24 ZMA . . . D 4 -69.637 -9.347 -46.234 1 152.39 ? C24 ZMA 401 A 1 HETATM 25 O O25 ZMA . . . D 4 -70.463 -10.086 -46.993 1 155.73 ? O25 ZMA 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #