data_3VGY # _model_server_result.job_id 6iuEnQ50jMo4oFujpxEqFg _model_server_result.datetime_utc '2025-03-04 06:22:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vgy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 3VGY # _exptl.entry_id 3VGY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VGY _cell.length_a 45.094 _cell.length_b 45.094 _cell.length_c 73.027 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -22.547 39.05255 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -45.094 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 260 n n S O2 SO4 doub 261 n n S O3 SO4 sing 262 n n S O4 SO4 sing 263 n n # _atom_sites.entry_id 3VGY _atom_sites.fract_transf_matrix[1][1] 0.022176 _atom_sites.fract_transf_matrix[1][2] 0.012803 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 C 1 601 1 SO4 SO4 . D 4 HOH C 1 701 1 HOH HOH . D 4 HOH C 2 702 2 HOH HOH . D 4 HOH C 3 703 3 HOH HOH . D 4 HOH C 4 704 4 HOH HOH . D 4 HOH C 5 705 5 HOH HOH . D 4 HOH C 6 706 6 HOH HOH . D 4 HOH C 7 707 7 HOH HOH . D 4 HOH C 8 708 8 HOH HOH . D 4 HOH C 9 709 9 HOH HOH . D 4 HOH C 10 710 10 HOH HOH . D 4 HOH C 11 711 11 HOH HOH . D 4 HOH C 12 712 12 HOH HOH . D 4 HOH C 13 713 13 HOH HOH . D 4 HOH C 14 714 22 HOH HOH . E 4 HOH D 1 701 14 HOH HOH . E 4 HOH D 2 702 15 HOH HOH . E 4 HOH D 3 703 16 HOH HOH . E 4 HOH D 4 704 17 HOH HOH . E 4 HOH D 5 705 18 HOH HOH . E 4 HOH D 6 706 19 HOH HOH . E 4 HOH D 7 707 20 HOH HOH . E 4 HOH D 8 708 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -10.138 17.936 36.576 0.49 20.74 ? S SO4 601 C 1 HETATM 2 O O1 SO4 . . . C 3 -10.621 19.117 35.867 0.49 18.6 ? O1 SO4 601 C 1 HETATM 3 O O2 SO4 . . . C 3 -10.153 16.69 35.81 0.49 20.04 ? O2 SO4 601 C 1 HETATM 4 O O3 SO4 . . . C 3 -8.772 18.23 36.988 0.49 22.55 ? O3 SO4 601 C 1 HETATM 5 O O4 SO4 . . . C 3 -11.029 17.748 37.715 0.49 15.09 ? O4 SO4 601 C 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #