data_3VH3 # _model_server_result.job_id ijNSuwCoRqMcx6GcZylKBg _model_server_result.datetime_utc '2024-11-29 16:00:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vh3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 3VH3 # _exptl.entry_id 3VH3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3VH3 _cell.length_a 69.815 _cell.length_b 69.815 _cell.length_c 220.392 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VH3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -69.815 69.815 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 195 A CYS 485 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc2 A SG CYS 198 A CYS 488 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 A SG CYS 279 A CYS 569 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc4 A SG CYS 282 A CYS 572 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3VH3 _atom_sites.fract_transf_matrix[1][1] 0.014324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 701 701 ZN ZN2 . D 4 HOH A 1 802 802 HOH HOH . D 4 HOH A 2 803 803 HOH HOH . D 4 HOH A 3 804 804 HOH HOH . D 4 HOH A 4 805 805 HOH HOH . D 4 HOH A 5 806 806 HOH HOH . D 4 HOH A 6 807 807 HOH HOH . D 4 HOH A 7 808 808 HOH HOH . D 4 HOH A 8 809 809 HOH HOH . D 4 HOH A 9 810 810 HOH HOH . D 4 HOH A 10 811 811 HOH HOH . D 4 HOH A 11 812 812 HOH HOH . D 4 HOH A 12 814 814 HOH HOH . D 4 HOH A 13 815 815 HOH HOH . D 4 HOH A 14 816 816 HOH HOH . D 4 HOH A 15 817 817 HOH HOH . D 4 HOH A 16 818 818 HOH HOH . D 4 HOH A 17 819 819 HOH HOH . D 4 HOH A 18 820 820 HOH HOH . D 4 HOH A 19 821 821 HOH HOH . D 4 HOH A 20 822 822 HOH HOH . D 4 HOH A 21 823 823 HOH HOH . D 4 HOH A 22 824 824 HOH HOH . D 4 HOH A 23 825 825 HOH HOH . D 4 HOH A 24 826 826 HOH HOH . D 4 HOH A 25 828 828 HOH HOH . D 4 HOH A 26 829 829 HOH HOH . D 4 HOH A 27 830 830 HOH HOH . D 4 HOH A 28 831 831 HOH HOH . D 4 HOH A 29 832 832 HOH HOH . D 4 HOH A 30 833 833 HOH HOH . D 4 HOH A 31 834 834 HOH HOH . D 4 HOH A 32 835 835 HOH HOH . D 4 HOH A 33 836 836 HOH HOH . D 4 HOH A 34 837 837 HOH HOH . D 4 HOH A 35 838 838 HOH HOH . D 4 HOH A 36 839 839 HOH HOH . D 4 HOH A 37 840 840 HOH HOH . D 4 HOH A 38 841 841 HOH HOH . D 4 HOH A 39 842 842 HOH HOH . D 4 HOH A 40 843 843 HOH HOH . D 4 HOH A 41 845 845 HOH HOH . D 4 HOH A 42 846 846 HOH HOH . D 4 HOH A 43 847 847 HOH HOH . D 4 HOH A 44 848 848 HOH HOH . D 4 HOH A 45 849 849 HOH HOH . D 4 HOH A 46 850 850 HOH HOH . D 4 HOH A 47 851 851 HOH HOH . D 4 HOH A 48 852 852 HOH HOH . D 4 HOH A 49 853 853 HOH HOH . D 4 HOH A 50 854 854 HOH HOH . D 4 HOH A 51 855 855 HOH HOH . D 4 HOH A 52 856 856 HOH HOH . D 4 HOH A 53 857 857 HOH HOH . D 4 HOH A 54 858 858 HOH HOH . D 4 HOH A 55 859 859 HOH HOH . D 4 HOH A 56 860 860 HOH HOH . D 4 HOH A 57 861 861 HOH HOH . D 4 HOH A 58 863 863 HOH HOH . D 4 HOH A 59 864 864 HOH HOH . D 4 HOH A 60 865 865 HOH HOH . D 4 HOH A 61 866 866 HOH HOH . D 4 HOH A 62 867 867 HOH HOH . D 4 HOH A 63 868 868 HOH HOH . D 4 HOH A 64 869 869 HOH HOH . D 4 HOH A 65 870 870 HOH HOH . D 4 HOH A 66 871 871 HOH HOH . D 4 HOH A 67 872 872 HOH HOH . D 4 HOH A 68 873 873 HOH HOH . D 4 HOH A 69 874 874 HOH HOH . D 4 HOH A 70 875 875 HOH HOH . D 4 HOH A 71 876 876 HOH HOH . D 4 HOH A 72 877 877 HOH HOH . D 4 HOH A 73 878 878 HOH HOH . D 4 HOH A 74 879 879 HOH HOH . D 4 HOH A 75 880 880 HOH HOH . D 4 HOH A 76 881 881 HOH HOH . D 4 HOH A 77 882 882 HOH HOH . D 4 HOH A 78 883 883 HOH HOH . D 4 HOH A 79 884 884 HOH HOH . D 4 HOH A 80 885 885 HOH HOH . D 4 HOH A 81 886 886 HOH HOH . D 4 HOH A 82 887 887 HOH HOH . D 4 HOH A 83 888 888 HOH HOH . D 4 HOH A 84 889 889 HOH HOH . D 4 HOH A 85 890 890 HOH HOH . D 4 HOH A 86 891 891 HOH HOH . D 4 HOH A 87 892 892 HOH HOH . D 4 HOH A 88 893 893 HOH HOH . D 4 HOH A 89 894 894 HOH HOH . D 4 HOH A 90 895 895 HOH HOH . D 4 HOH A 91 896 896 HOH HOH . D 4 HOH A 92 897 897 HOH HOH . D 4 HOH A 93 898 898 HOH HOH . D 4 HOH A 94 899 899 HOH HOH . D 4 HOH A 95 900 900 HOH HOH . D 4 HOH A 96 901 901 HOH HOH . D 4 HOH A 97 902 902 HOH HOH . D 4 HOH A 98 903 903 HOH HOH . D 4 HOH A 99 904 904 HOH HOH . D 4 HOH A 100 905 905 HOH HOH . D 4 HOH A 101 906 906 HOH HOH . D 4 HOH A 102 907 907 HOH HOH . D 4 HOH A 103 908 908 HOH HOH . D 4 HOH A 104 909 909 HOH HOH . D 4 HOH A 105 910 910 HOH HOH . D 4 HOH A 106 911 911 HOH HOH . D 4 HOH A 107 912 912 HOH HOH . D 4 HOH A 108 913 913 HOH HOH . D 4 HOH A 109 914 914 HOH HOH . D 4 HOH A 110 915 915 HOH HOH . D 4 HOH A 111 916 916 HOH HOH . D 4 HOH A 112 917 917 HOH HOH . D 4 HOH A 113 918 918 HOH HOH . D 4 HOH A 114 919 919 HOH HOH . D 4 HOH A 115 920 920 HOH HOH . D 4 HOH A 116 921 921 HOH HOH . D 4 HOH A 117 922 922 HOH HOH . D 4 HOH A 118 923 923 HOH HOH . D 4 HOH A 119 924 924 HOH HOH . D 4 HOH A 120 925 925 HOH HOH . D 4 HOH A 121 926 926 HOH HOH . D 4 HOH A 122 927 927 HOH HOH . D 4 HOH A 123 928 928 HOH HOH . D 4 HOH A 124 929 929 HOH HOH . D 4 HOH A 125 930 930 HOH HOH . D 4 HOH A 126 931 931 HOH HOH . D 4 HOH A 127 932 932 HOH HOH . D 4 HOH A 128 933 933 HOH HOH . D 4 HOH A 129 934 934 HOH HOH . D 4 HOH A 130 935 935 HOH HOH . D 4 HOH A 131 936 936 HOH HOH . D 4 HOH A 132 937 937 HOH HOH . D 4 HOH A 133 938 938 HOH HOH . D 4 HOH A 134 939 939 HOH HOH . D 4 HOH A 135 940 940 HOH HOH . D 4 HOH A 136 941 941 HOH HOH . D 4 HOH A 137 942 942 HOH HOH . D 4 HOH A 138 943 943 HOH HOH . D 4 HOH A 139 944 944 HOH HOH . D 4 HOH A 140 945 945 HOH HOH . E 4 HOH B 1 201 201 HOH HOH . E 4 HOH B 2 202 202 HOH HOH . E 4 HOH B 3 203 203 HOH HOH . E 4 HOH B 4 204 204 HOH HOH . E 4 HOH B 5 205 205 HOH HOH . E 4 HOH B 6 206 206 HOH HOH . E 4 HOH B 7 207 207 HOH HOH . E 4 HOH B 8 208 208 HOH HOH . E 4 HOH B 9 209 209 HOH HOH . E 4 HOH B 10 210 210 HOH HOH . E 4 HOH B 11 211 211 HOH HOH . E 4 HOH B 12 212 212 HOH HOH . E 4 HOH B 13 213 213 HOH HOH . E 4 HOH B 14 214 214 HOH HOH . E 4 HOH B 15 215 215 HOH HOH . E 4 HOH B 16 216 216 HOH HOH . E 4 HOH B 17 217 217 HOH HOH . E 4 HOH B 18 218 218 HOH HOH . E 4 HOH B 19 219 219 HOH HOH . E 4 HOH B 20 220 220 HOH HOH . E 4 HOH B 21 221 221 HOH HOH . E 4 HOH B 22 222 222 HOH HOH . E 4 HOH B 23 223 223 HOH HOH . E 4 HOH B 24 801 801 HOH HOH . E 4 HOH B 25 813 813 HOH HOH . E 4 HOH B 26 827 827 HOH HOH . E 4 HOH B 27 844 844 HOH HOH . E 4 HOH B 28 862 862 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -21.38 _atom_site.Cartn_y 17.844 _atom_site.Cartn_z 13.023 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.95 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #