data_3VHL
#
_model_server_result.job_id            ZX1Y7nQ2D_AUuEJzUuGW2g 
_model_server_result.datetime_utc      '2025-07-30 15:46:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vhl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":189}' 
#
_entry.id    3VHL 
#
_exptl.entry_id    3VHL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.82 
_cell.angle_gamma         90 
_cell.entry_id            3VHL 
_cell.length_a            104.185 
_cell.length_b            73.279 
_cell.length_c            65.031 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VHL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     3VHL 
_atom_sites.fract_transf_matrix[1][1]    0.009598 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002539 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013646 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015906 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PO4 A 1 2 2 PO4 PO4 . 
D 3 PO4 B 1 189 1 PO4 PO4 . 
E 4 HOH A 1 1 1 HOH HOH . 
E 4 HOH A 2 3 3 HOH HOH . 
E 4 HOH A 3 5 5 HOH HOH . 
E 4 HOH A 4 8 8 HOH HOH . 
E 4 HOH A 5 9 9 HOH HOH . 
E 4 HOH A 6 11 11 HOH HOH . 
E 4 HOH A 7 12 12 HOH HOH . 
E 4 HOH A 8 14 14 HOH HOH . 
E 4 HOH A 9 16 16 HOH HOH . 
E 4 HOH A 10 17 17 HOH HOH . 
E 4 HOH A 11 18 18 HOH HOH . 
E 4 HOH A 12 20 20 HOH HOH . 
E 4 HOH A 13 21 21 HOH HOH . 
E 4 HOH A 14 24 24 HOH HOH . 
E 4 HOH A 15 25 25 HOH HOH . 
E 4 HOH A 16 27 27 HOH HOH . 
E 4 HOH A 17 28 28 HOH HOH . 
E 4 HOH A 18 29 29 HOH HOH . 
E 4 HOH A 19 31 31 HOH HOH . 
E 4 HOH A 20 33 33 HOH HOH . 
E 4 HOH A 21 36 36 HOH HOH . 
E 4 HOH A 22 39 39 HOH HOH . 
E 4 HOH A 23 40 40 HOH HOH . 
E 4 HOH A 24 41 41 HOH HOH . 
E 4 HOH A 25 42 42 HOH HOH . 
E 4 HOH A 26 45 45 HOH HOH . 
E 4 HOH A 27 48 48 HOH HOH . 
E 4 HOH A 28 49 49 HOH HOH . 
E 4 HOH A 29 51 51 HOH HOH . 
E 4 HOH A 30 54 54 HOH HOH . 
E 4 HOH A 31 58 58 HOH HOH . 
E 4 HOH A 32 61 61 HOH HOH . 
E 4 HOH A 33 64 64 HOH HOH . 
E 4 HOH A 34 66 66 HOH HOH . 
E 4 HOH A 35 67 67 HOH HOH . 
E 4 HOH A 36 68 68 HOH HOH . 
E 4 HOH A 37 70 70 HOH HOH . 
E 4 HOH A 38 71 71 HOH HOH . 
E 4 HOH A 39 73 73 HOH HOH . 
E 4 HOH A 40 75 75 HOH HOH . 
E 4 HOH A 41 79 79 HOH HOH . 
E 4 HOH A 42 84 84 HOH HOH . 
E 4 HOH A 43 87 87 HOH HOH . 
E 4 HOH A 44 88 88 HOH HOH . 
E 4 HOH A 45 89 89 HOH HOH . 
E 4 HOH A 46 90 90 HOH HOH . 
E 4 HOH A 47 91 91 HOH HOH . 
E 4 HOH A 48 93 93 HOH HOH . 
E 4 HOH A 49 94 94 HOH HOH . 
E 4 HOH A 50 95 95 HOH HOH . 
E 4 HOH A 51 97 97 HOH HOH . 
E 4 HOH A 52 99 99 HOH HOH . 
E 4 HOH A 53 102 102 HOH HOH . 
E 4 HOH A 54 104 104 HOH HOH . 
E 4 HOH A 55 107 107 HOH HOH . 
E 4 HOH A 56 108 108 HOH HOH . 
E 4 HOH A 57 109 109 HOH HOH . 
E 4 HOH A 58 110 110 HOH HOH . 
E 4 HOH A 59 111 111 HOH HOH . 
E 4 HOH A 60 112 112 HOH HOH . 
E 4 HOH A 61 113 113 HOH HOH . 
E 4 HOH A 62 117 117 HOH HOH . 
E 4 HOH A 63 118 118 HOH HOH . 
E 4 HOH A 64 119 119 HOH HOH . 
E 4 HOH A 65 123 123 HOH HOH . 
E 4 HOH A 66 124 124 HOH HOH . 
E 4 HOH A 67 125 125 HOH HOH . 
E 4 HOH A 68 126 126 HOH HOH . 
E 4 HOH A 69 127 127 HOH HOH . 
E 4 HOH A 70 128 128 HOH HOH . 
E 4 HOH A 71 129 129 HOH HOH . 
E 4 HOH A 72 132 132 HOH HOH . 
E 4 HOH A 73 133 133 HOH HOH . 
E 4 HOH A 74 134 134 HOH HOH . 
E 4 HOH A 75 140 140 HOH HOH . 
E 4 HOH A 76 141 141 HOH HOH . 
E 4 HOH A 77 144 144 HOH HOH . 
E 4 HOH A 78 145 145 HOH HOH . 
E 4 HOH A 79 146 146 HOH HOH . 
E 4 HOH A 80 150 150 HOH HOH . 
E 4 HOH A 81 152 152 HOH HOH . 
E 4 HOH A 82 158 158 HOH HOH . 
E 4 HOH A 83 160 160 HOH HOH . 
E 4 HOH A 84 161 161 HOH HOH . 
E 4 HOH A 85 163 163 HOH HOH . 
E 4 HOH A 86 169 169 HOH HOH . 
E 4 HOH A 87 171 171 HOH HOH . 
E 4 HOH A 88 175 175 HOH HOH . 
E 4 HOH A 89 177 177 HOH HOH . 
E 4 HOH A 90 179 179 HOH HOH . 
E 4 HOH A 91 181 181 HOH HOH . 
E 4 HOH A 92 184 184 HOH HOH . 
E 4 HOH A 93 185 185 HOH HOH . 
E 4 HOH A 94 186 186 HOH HOH . 
E 4 HOH A 95 187 187 HOH HOH . 
E 4 HOH A 96 188 188 HOH HOH . 
E 4 HOH A 97 189 189 HOH HOH . 
E 4 HOH A 98 192 192 HOH HOH . 
E 4 HOH A 99 194 194 HOH HOH . 
E 4 HOH A 100 195 195 HOH HOH . 
E 4 HOH A 101 196 196 HOH HOH . 
E 4 HOH A 102 197 197 HOH HOH . 
E 4 HOH A 103 198 198 HOH HOH . 
E 4 HOH A 104 199 199 HOH HOH . 
E 4 HOH A 105 200 200 HOH HOH . 
E 4 HOH A 106 204 204 HOH HOH . 
E 4 HOH A 107 207 207 HOH HOH . 
E 4 HOH A 108 210 210 HOH HOH . 
E 4 HOH A 109 213 213 HOH HOH . 
E 4 HOH A 110 214 214 HOH HOH . 
E 4 HOH A 111 216 216 HOH HOH . 
E 4 HOH A 112 217 217 HOH HOH . 
E 4 HOH A 113 218 218 HOH HOH . 
F 4 HOH B 1 190 2 HOH HOH . 
F 4 HOH B 2 191 4 HOH HOH . 
F 4 HOH B 3 192 6 HOH HOH . 
F 4 HOH B 4 193 7 HOH HOH . 
F 4 HOH B 5 194 10 HOH HOH . 
F 4 HOH B 6 195 13 HOH HOH . 
F 4 HOH B 7 196 19 HOH HOH . 
F 4 HOH B 8 197 22 HOH HOH . 
F 4 HOH B 9 198 23 HOH HOH . 
F 4 HOH B 10 199 26 HOH HOH . 
F 4 HOH B 11 200 30 HOH HOH . 
F 4 HOH B 12 201 32 HOH HOH . 
F 4 HOH B 13 202 202 HOH HOH . 
F 4 HOH B 14 203 203 HOH HOH . 
F 4 HOH B 15 204 34 HOH HOH . 
F 4 HOH B 16 205 205 HOH HOH . 
F 4 HOH B 17 206 37 HOH HOH . 
F 4 HOH B 18 207 38 HOH HOH . 
F 4 HOH B 19 208 208 HOH HOH . 
F 4 HOH B 20 209 209 HOH HOH . 
F 4 HOH B 21 210 43 HOH HOH . 
F 4 HOH B 22 211 211 HOH HOH . 
F 4 HOH B 23 212 212 HOH HOH . 
F 4 HOH B 24 213 44 HOH HOH . 
F 4 HOH B 25 214 46 HOH HOH . 
F 4 HOH B 26 215 47 HOH HOH . 
F 4 HOH B 27 216 50 HOH HOH . 
F 4 HOH B 28 217 52 HOH HOH . 
F 4 HOH B 29 218 53 HOH HOH . 
F 4 HOH B 30 219 219 HOH HOH . 
F 4 HOH B 31 220 55 HOH HOH . 
F 4 HOH B 32 221 56 HOH HOH . 
F 4 HOH B 33 222 57 HOH HOH . 
F 4 HOH B 34 223 59 HOH HOH . 
F 4 HOH B 35 224 60 HOH HOH . 
F 4 HOH B 36 225 62 HOH HOH . 
F 4 HOH B 37 226 63 HOH HOH . 
F 4 HOH B 38 227 65 HOH HOH . 
F 4 HOH B 39 228 69 HOH HOH . 
F 4 HOH B 40 229 72 HOH HOH . 
F 4 HOH B 41 230 74 HOH HOH . 
F 4 HOH B 42 231 76 HOH HOH . 
F 4 HOH B 43 232 77 HOH HOH . 
F 4 HOH B 44 233 78 HOH HOH . 
F 4 HOH B 45 234 80 HOH HOH . 
F 4 HOH B 46 235 81 HOH HOH . 
F 4 HOH B 47 236 82 HOH HOH . 
F 4 HOH B 48 237 86 HOH HOH . 
F 4 HOH B 49 238 92 HOH HOH . 
F 4 HOH B 50 239 98 HOH HOH . 
F 4 HOH B 51 240 100 HOH HOH . 
F 4 HOH B 52 241 101 HOH HOH . 
F 4 HOH B 53 242 103 HOH HOH . 
F 4 HOH B 54 243 105 HOH HOH . 
F 4 HOH B 55 244 115 HOH HOH . 
F 4 HOH B 56 245 120 HOH HOH . 
F 4 HOH B 57 246 121 HOH HOH . 
F 4 HOH B 58 247 130 HOH HOH . 
F 4 HOH B 59 248 131 HOH HOH . 
F 4 HOH B 60 249 135 HOH HOH . 
F 4 HOH B 61 250 138 HOH HOH . 
F 4 HOH B 62 251 139 HOH HOH . 
F 4 HOH B 63 252 143 HOH HOH . 
F 4 HOH B 64 253 147 HOH HOH . 
F 4 HOH B 65 254 148 HOH HOH . 
F 4 HOH B 66 255 149 HOH HOH . 
F 4 HOH B 67 256 153 HOH HOH . 
F 4 HOH B 68 257 154 HOH HOH . 
F 4 HOH B 69 258 155 HOH HOH . 
F 4 HOH B 70 259 159 HOH HOH . 
F 4 HOH B 71 260 162 HOH HOH . 
F 4 HOH B 72 261 164 HOH HOH . 
F 4 HOH B 73 262 165 HOH HOH . 
F 4 HOH B 74 263 167 HOH HOH . 
F 4 HOH B 75 264 168 HOH HOH . 
F 4 HOH B 76 265 170 HOH HOH . 
F 4 HOH B 77 266 172 HOH HOH . 
F 4 HOH B 78 267 176 HOH HOH . 
F 4 HOH B 79 268 178 HOH HOH . 
F 4 HOH B 80 269 180 HOH HOH . 
F 4 HOH B 81 270 182 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 3 40.491 -3.297 21.197 1 34.55 ? P PO4 189 B 1 
HETATM 2 O O1 PO4 . . . D 3 41.399 -3.699 20.066 1 29.82 ? O1 PO4 189 B 1 
HETATM 3 O O2 PO4 . . . D 3 39.744 -4.545 21.679 1 36.09 ? O2 PO4 189 B 1 
HETATM 4 O O3 PO4 . . . D 3 39.491 -2.272 20.701 1 33.15 ? O3 PO4 189 B 1 
HETATM 5 O O4 PO4 . . . D 3 41.257 -2.697 22.354 1 33.84 ? O4 PO4 189 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           5 
#