data_3VHM
#
_model_server_result.job_id            eW8sOBsAk7duoenOP5Zlyg 
_model_server_result.datetime_utc      '2024-10-20 20:13:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vhm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1127}' 
#
_entry.id    3VHM 
#
_exptl.entry_id    3VHM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.02 
_cell.angle_gamma         90 
_cell.entry_id            3VHM 
_cell.length_a            131.02 
_cell.length_b            73.535 
_cell.length_c            81.18 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VHM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 K N N 
? 4 L N N 
? 4 O N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 83 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
disulf ? disulf2 B SG CYS 4 B CYS 4 1_555 B SG CYS 83 B CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 C SG CYS 4 C CYS 4 1_555 C SG CYS 83 C CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? 
disulf ? disulf4 D SG CYS 4 D CYS 4 1_555 D SG CYS 83 D CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A ND2 ASN 17 A ASN 17 1_555 F C1 NAG . A NAG 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.716 ? 
covale ? covale2 B ND2 ASN 17 B ASN 17 1_555 J C1 NAG . B NAG 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
covale ? covale3 C ND2 ASN 17 C ASN 17 1_555 N C1 NAG . C NAG 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.843 ? 
covale ? covale4 D ND2 ASN 17 D ASN 17 1_555 Q C1 NAG . D NAG 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3VHM 
_atom_sites.fract_transf_matrix[1][1]    0.007632 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00441 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013599 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014227 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NPK A 1 1124 1124 NPK NPC . 
F 3 NAG A 1 1125 1125 NAG NAG . 
G 4 SO4 A 1 1126 1126 SO4 SO4 . 
H 4 SO4 A 1 1127 1127 SO4 SO4 . 
I 2 NPK B 1 1124 1124 NPK NPC . 
J 3 NAG B 1 1125 1125 NAG NAG . 
K 4 SO4 B 1 1126 1126 SO4 SO4 . 
L 4 SO4 B 1 1127 1127 SO4 SO4 . 
M 2 NPK C 1 1124 1124 NPK NPC . 
N 3 NAG C 1 1125 1125 NAG NAG . 
O 4 SO4 C 1 1127 1127 SO4 SO4 . 
P 2 NPK D 1 1124 1124 NPK NPC . 
Q 3 NAG D 1 1125 1125 NAG NAG . 
R 4 SO4 D 1 1126 1126 SO4 SO4 . 
S 5 HOH A 1 124 1 HOH HOH . 
S 5 HOH A 2 125 3 HOH HOH . 
S 5 HOH A 3 126 4 HOH HOH . 
S 5 HOH A 4 127 5 HOH HOH . 
S 5 HOH A 5 128 6 HOH HOH . 
S 5 HOH A 6 129 10 HOH HOH . 
S 5 HOH A 7 130 11 HOH HOH . 
S 5 HOH A 8 131 12 HOH HOH . 
S 5 HOH A 9 132 14 HOH HOH . 
S 5 HOH A 10 133 17 HOH HOH . 
S 5 HOH A 11 134 18 HOH HOH . 
S 5 HOH A 12 135 19 HOH HOH . 
S 5 HOH A 13 136 20 HOH HOH . 
S 5 HOH A 14 137 21 HOH HOH . 
S 5 HOH A 15 138 22 HOH HOH . 
S 5 HOH A 16 139 23 HOH HOH . 
S 5 HOH A 17 140 24 HOH HOH . 
S 5 HOH A 18 141 25 HOH HOH . 
S 5 HOH A 19 142 26 HOH HOH . 
S 5 HOH A 20 143 33 HOH HOH . 
S 5 HOH A 21 144 34 HOH HOH . 
S 5 HOH A 22 145 36 HOH HOH . 
S 5 HOH A 23 146 38 HOH HOH . 
S 5 HOH A 24 147 40 HOH HOH . 
S 5 HOH A 25 148 41 HOH HOH . 
S 5 HOH A 26 149 44 HOH HOH . 
S 5 HOH A 27 150 46 HOH HOH . 
S 5 HOH A 28 151 47 HOH HOH . 
S 5 HOH A 29 152 48 HOH HOH . 
S 5 HOH A 30 155 53 HOH HOH . 
S 5 HOH A 31 156 54 HOH HOH . 
S 5 HOH A 32 157 55 HOH HOH . 
S 5 HOH A 33 158 56 HOH HOH . 
S 5 HOH A 34 159 94 HOH HOH . 
S 5 HOH A 35 160 95 HOH HOH . 
S 5 HOH A 36 161 96 HOH HOH . 
S 5 HOH A 37 162 101 HOH HOH . 
S 5 HOH A 38 163 104 HOH HOH . 
S 5 HOH A 39 164 123 HOH HOH . 
S 5 HOH A 40 170 170 HOH HOH . 
S 5 HOH A 41 175 175 HOH HOH . 
S 5 HOH A 42 178 178 HOH HOH . 
S 5 HOH A 43 190 190 HOH HOH . 
S 5 HOH A 44 192 192 HOH HOH . 
S 5 HOH A 45 195 195 HOH HOH . 
S 5 HOH A 46 198 198 HOH HOH . 
S 5 HOH A 47 200 200 HOH HOH . 
S 5 HOH A 48 201 201 HOH HOH . 
S 5 HOH A 49 203 203 HOH HOH . 
S 5 HOH A 50 205 205 HOH HOH . 
S 5 HOH A 51 206 206 HOH HOH . 
T 5 HOH B 1 124 9 HOH HOH . 
T 5 HOH B 2 125 28 HOH HOH . 
T 5 HOH B 3 126 29 HOH HOH . 
T 5 HOH B 4 127 30 HOH HOH . 
T 5 HOH B 5 128 31 HOH HOH . 
T 5 HOH B 6 129 32 HOH HOH . 
T 5 HOH B 7 130 35 HOH HOH . 
T 5 HOH B 8 131 37 HOH HOH . 
T 5 HOH B 9 132 39 HOH HOH . 
T 5 HOH B 10 133 42 HOH HOH . 
T 5 HOH B 11 134 43 HOH HOH . 
T 5 HOH B 12 135 45 HOH HOH . 
T 5 HOH B 13 136 51 HOH HOH . 
T 5 HOH B 14 137 59 HOH HOH . 
T 5 HOH B 15 138 60 HOH HOH . 
T 5 HOH B 16 139 61 HOH HOH . 
T 5 HOH B 17 140 62 HOH HOH . 
T 5 HOH B 18 141 63 HOH HOH . 
T 5 HOH B 19 142 64 HOH HOH . 
T 5 HOH B 20 143 72 HOH HOH . 
T 5 HOH B 21 144 74 HOH HOH . 
T 5 HOH B 22 145 75 HOH HOH . 
T 5 HOH B 23 146 76 HOH HOH . 
T 5 HOH B 24 147 77 HOH HOH . 
T 5 HOH B 25 148 86 HOH HOH . 
T 5 HOH B 26 149 87 HOH HOH . 
T 5 HOH B 27 150 88 HOH HOH . 
T 5 HOH B 28 151 92 HOH HOH . 
T 5 HOH B 29 152 93 HOH HOH . 
T 5 HOH B 30 153 49 HOH HOH . 
T 5 HOH B 31 154 50 HOH HOH . 
T 5 HOH B 32 155 99 HOH HOH . 
T 5 HOH B 33 156 100 HOH HOH . 
T 5 HOH B 34 157 102 HOH HOH . 
T 5 HOH B 35 158 103 HOH HOH . 
T 5 HOH B 36 159 97 HOH HOH . 
T 5 HOH B 37 160 98 HOH HOH . 
T 5 HOH B 38 184 184 HOH HOH . 
T 5 HOH B 39 188 188 HOH HOH . 
T 5 HOH B 40 189 189 HOH HOH . 
T 5 HOH B 41 194 194 HOH HOH . 
T 5 HOH B 42 199 199 HOH HOH . 
T 5 HOH B 43 202 202 HOH HOH . 
T 5 HOH B 44 207 207 HOH HOH . 
T 5 HOH B 45 208 208 HOH HOH . 
U 5 HOH C 1 124 124 HOH HOH . 
U 5 HOH C 2 125 125 HOH HOH . 
U 5 HOH C 3 126 126 HOH HOH . 
U 5 HOH C 4 127 2 HOH HOH . 
U 5 HOH C 5 128 128 HOH HOH . 
U 5 HOH C 6 129 7 HOH HOH . 
U 5 HOH C 7 130 130 HOH HOH . 
U 5 HOH C 8 131 131 HOH HOH . 
U 5 HOH C 9 132 8 HOH HOH . 
U 5 HOH C 10 133 133 HOH HOH . 
U 5 HOH C 11 134 134 HOH HOH . 
U 5 HOH C 12 135 135 HOH HOH . 
U 5 HOH C 13 136 136 HOH HOH . 
U 5 HOH C 14 137 137 HOH HOH . 
U 5 HOH C 15 138 13 HOH HOH . 
U 5 HOH C 16 139 139 HOH HOH . 
U 5 HOH C 17 140 140 HOH HOH . 
U 5 HOH C 18 141 15 HOH HOH . 
U 5 HOH C 19 142 16 HOH HOH . 
U 5 HOH C 20 143 143 HOH HOH . 
U 5 HOH C 21 144 144 HOH HOH . 
U 5 HOH C 22 145 68 HOH HOH . 
U 5 HOH C 23 146 146 HOH HOH . 
U 5 HOH C 24 147 69 HOH HOH . 
U 5 HOH C 25 148 148 HOH HOH . 
U 5 HOH C 26 149 149 HOH HOH . 
U 5 HOH C 27 150 150 HOH HOH . 
U 5 HOH C 28 151 151 HOH HOH . 
U 5 HOH C 29 152 152 HOH HOH . 
U 5 HOH C 30 153 153 HOH HOH . 
U 5 HOH C 31 154 154 HOH HOH . 
U 5 HOH C 32 155 155 HOH HOH . 
U 5 HOH C 33 156 73 HOH HOH . 
U 5 HOH C 34 157 79 HOH HOH . 
U 5 HOH C 35 158 80 HOH HOH . 
U 5 HOH C 36 159 105 HOH HOH . 
U 5 HOH C 37 160 106 HOH HOH . 
U 5 HOH C 38 161 108 HOH HOH . 
U 5 HOH C 39 162 109 HOH HOH . 
U 5 HOH C 40 163 110 HOH HOH . 
U 5 HOH C 41 164 111 HOH HOH . 
U 5 HOH C 42 165 114 HOH HOH . 
U 5 HOH C 43 166 116 HOH HOH . 
U 5 HOH C 44 167 118 HOH HOH . 
U 5 HOH C 45 168 119 HOH HOH . 
U 5 HOH C 46 169 169 HOH HOH . 
U 5 HOH C 47 170 120 HOH HOH . 
U 5 HOH C 48 171 122 HOH HOH . 
U 5 HOH C 49 176 176 HOH HOH . 
U 5 HOH C 50 180 180 HOH HOH . 
U 5 HOH C 51 181 181 HOH HOH . 
U 5 HOH C 52 182 182 HOH HOH . 
U 5 HOH C 53 185 185 HOH HOH . 
U 5 HOH C 54 186 186 HOH HOH . 
U 5 HOH C 55 187 187 HOH HOH . 
U 5 HOH C 56 191 191 HOH HOH . 
U 5 HOH C 57 193 193 HOH HOH . 
V 5 HOH D 1 124 27 HOH HOH . 
V 5 HOH D 2 125 57 HOH HOH . 
V 5 HOH D 3 126 58 HOH HOH . 
V 5 HOH D 4 127 127 HOH HOH . 
V 5 HOH D 5 128 65 HOH HOH . 
V 5 HOH D 6 129 129 HOH HOH . 
V 5 HOH D 7 130 66 HOH HOH . 
V 5 HOH D 8 131 67 HOH HOH . 
V 5 HOH D 9 132 132 HOH HOH . 
V 5 HOH D 10 133 70 HOH HOH . 
V 5 HOH D 11 134 71 HOH HOH . 
V 5 HOH D 12 135 78 HOH HOH . 
V 5 HOH D 13 136 81 HOH HOH . 
V 5 HOH D 14 137 82 HOH HOH . 
V 5 HOH D 15 138 138 HOH HOH . 
V 5 HOH D 16 139 83 HOH HOH . 
V 5 HOH D 17 140 84 HOH HOH . 
V 5 HOH D 18 141 141 HOH HOH . 
V 5 HOH D 19 142 142 HOH HOH . 
V 5 HOH D 20 143 85 HOH HOH . 
V 5 HOH D 21 144 89 HOH HOH . 
V 5 HOH D 22 145 145 HOH HOH . 
V 5 HOH D 23 146 90 HOH HOH . 
V 5 HOH D 24 147 147 HOH HOH . 
V 5 HOH D 25 148 91 HOH HOH . 
V 5 HOH D 26 149 107 HOH HOH . 
V 5 HOH D 27 150 112 HOH HOH . 
V 5 HOH D 28 151 113 HOH HOH . 
V 5 HOH D 29 152 117 HOH HOH . 
V 5 HOH D 30 153 121 HOH HOH . 
V 5 HOH D 31 156 156 HOH HOH . 
V 5 HOH D 32 157 157 HOH HOH . 
V 5 HOH D 33 158 158 HOH HOH . 
V 5 HOH D 34 159 159 HOH HOH . 
V 5 HOH D 35 161 161 HOH HOH . 
V 5 HOH D 36 162 162 HOH HOH . 
V 5 HOH D 37 163 163 HOH HOH . 
V 5 HOH D 38 164 164 HOH HOH . 
V 5 HOH D 39 165 165 HOH HOH . 
V 5 HOH D 40 166 166 HOH HOH . 
V 5 HOH D 41 167 167 HOH HOH . 
V 5 HOH D 42 168 168 HOH HOH . 
V 5 HOH D 43 171 171 HOH HOH . 
V 5 HOH D 44 172 172 HOH HOH . 
V 5 HOH D 45 173 173 HOH HOH . 
V 5 HOH D 46 174 174 HOH HOH . 
V 5 HOH D 47 179 179 HOH HOH . 
V 5 HOH D 48 209 209 HOH HOH . 
V 5 HOH D 49 210 210 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . L 4 10.567 5.979 -18.783 1 67.36 ? S SO4 1127 B 1 
HETATM 2 O O1 SO4 . . . L 4 10.86 4.779 -19.541 1 68.7 ? O1 SO4 1127 B 1 
HETATM 3 O O2 SO4 . . . L 4 9.651 6.89 -19.454 1 67.48 ? O2 SO4 1127 B 1 
HETATM 4 O O3 SO4 . . . L 4 11.836 6.714 -18.603 1 70.3 ? O3 SO4 1127 B 1 
HETATM 5 O O4 SO4 . . . L 4 9.976 5.558 -17.513 1 66.48 ? O4 SO4 1127 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#