data_3VI6 # _model_server_result.job_id 63Wt-lqN4NjQB0lfxfHSXw _model_server_result.datetime_utc '2024-12-03 13:56:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vi6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 3VI6 # _exptl.entry_id 3VI6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3VI6 _cell.length_a 56.282 _cell.length_b 56.282 _cell.length_c 203.628 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VI6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 56.282 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 28.141 48.741642 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 3VI6 _atom_sites.fract_transf_matrix[1][1] 0.017768 _atom_sites.fract_transf_matrix[1][2] 0.010258 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004911 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 201 201 FMT FMT . C 3 HOH A 1 125 2 HOH HOH . C 3 HOH A 2 126 3 HOH HOH . C 3 HOH A 3 127 4 HOH HOH . C 3 HOH A 4 128 5 HOH HOH . C 3 HOH A 5 129 6 HOH HOH . C 3 HOH A 6 130 7 HOH HOH . C 3 HOH A 7 131 8 HOH HOH . C 3 HOH A 8 132 9 HOH HOH . C 3 HOH A 9 133 10 HOH HOH . C 3 HOH A 10 134 11 HOH HOH . C 3 HOH A 11 135 12 HOH HOH . C 3 HOH A 12 136 13 HOH HOH . C 3 HOH A 13 137 14 HOH HOH . C 3 HOH A 14 138 15 HOH HOH . C 3 HOH A 15 139 16 HOH HOH . C 3 HOH A 16 140 17 HOH HOH . C 3 HOH A 17 141 18 HOH HOH . C 3 HOH A 18 142 19 HOH HOH . C 3 HOH A 19 143 20 HOH HOH . C 3 HOH A 20 144 21 HOH HOH . C 3 HOH A 21 145 22 HOH HOH . C 3 HOH A 22 146 23 HOH HOH . C 3 HOH A 23 147 24 HOH HOH . C 3 HOH A 24 148 25 HOH HOH . C 3 HOH A 25 149 26 HOH HOH . C 3 HOH A 26 150 27 HOH HOH . C 3 HOH A 27 151 28 HOH HOH . C 3 HOH A 28 152 29 HOH HOH . C 3 HOH A 29 153 30 HOH HOH . C 3 HOH A 30 154 31 HOH HOH . C 3 HOH A 31 155 32 HOH HOH . C 3 HOH A 32 156 33 HOH HOH . C 3 HOH A 33 157 34 HOH HOH . C 3 HOH A 34 158 35 HOH HOH . C 3 HOH A 35 159 36 HOH HOH . C 3 HOH A 36 160 37 HOH HOH . C 3 HOH A 37 161 38 HOH HOH . C 3 HOH A 38 162 39 HOH HOH . C 3 HOH A 39 163 40 HOH HOH . C 3 HOH A 40 164 41 HOH HOH . C 3 HOH A 41 165 42 HOH HOH . C 3 HOH A 42 166 43 HOH HOH . C 3 HOH A 43 167 44 HOH HOH . C 3 HOH A 44 168 45 HOH HOH . C 3 HOH A 45 169 46 HOH HOH . C 3 HOH A 46 170 47 HOH HOH . C 3 HOH A 47 171 48 HOH HOH . C 3 HOH A 48 172 49 HOH HOH . C 3 HOH A 49 173 50 HOH HOH . C 3 HOH A 50 174 51 HOH HOH . C 3 HOH A 51 175 53 HOH HOH . C 3 HOH A 52 176 54 HOH HOH . C 3 HOH A 53 177 55 HOH HOH . C 3 HOH A 54 178 56 HOH HOH . C 3 HOH A 55 179 57 HOH HOH . C 3 HOH A 56 180 58 HOH HOH . C 3 HOH A 57 181 59 HOH HOH . C 3 HOH A 58 182 60 HOH HOH . C 3 HOH A 59 183 61 HOH HOH . C 3 HOH A 60 184 62 HOH HOH . C 3 HOH A 61 185 63 HOH HOH . C 3 HOH A 62 186 64 HOH HOH . C 3 HOH A 63 187 65 HOH HOH . C 3 HOH A 64 188 66 HOH HOH . C 3 HOH A 65 189 67 HOH HOH . C 3 HOH A 66 190 68 HOH HOH . C 3 HOH A 67 191 69 HOH HOH . C 3 HOH A 68 192 71 HOH HOH . C 3 HOH A 69 193 72 HOH HOH . C 3 HOH A 70 194 73 HOH HOH . C 3 HOH A 71 195 74 HOH HOH . C 3 HOH A 72 196 75 HOH HOH . C 3 HOH A 73 197 76 HOH HOH . C 3 HOH A 74 198 77 HOH HOH . C 3 HOH A 75 199 78 HOH HOH . C 3 HOH A 76 200 79 HOH HOH . C 3 HOH A 77 202 80 HOH HOH . C 3 HOH A 78 203 81 HOH HOH . C 3 HOH A 79 204 82 HOH HOH . C 3 HOH A 80 205 83 HOH HOH . C 3 HOH A 81 206 84 HOH HOH . C 3 HOH A 82 207 85 HOH HOH . C 3 HOH A 83 208 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . B 2 17.443 14.989 40.585 1 11.68 ? C FMT 201 A 1 HETATM 2 O O1 FMT . . . B 2 17.884 14.704 41.696 1 11.46 ? O1 FMT 201 A 1 HETATM 3 O O2 FMT . . . B 2 16.531 14.35 40.062 1 11.87 ? O2 FMT 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 3 #