data_3VIQ
#
_model_server_result.job_id            AExw5rdHKtrQ8qsE0JNElw 
_model_server_result.datetime_utc      '2024-10-19 16:37:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3viq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":6}' 
#
_entry.id    3VIQ 
#
_exptl.entry_id    3VIQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3VIQ 
_cell.length_a            88.159 
_cell.length_b            128.682 
_cell.length_c            59.97 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VIQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,N,O 1 1 
C,D,H,I,J,K,L,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3VIQ 
_atom_sites.fract_transf_matrix[1][1]    0.011343 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016675 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GOL A 1 3 3 GOL GOL . 
F 3 GOL A 1 4 4 GOL GOL . 
G 4 NO3 A 1 13 13 NO3 NO3 . 
H 5 SO4 C 1 1 1 SO4 SO4 . 
I 3 GOL C 1 5 5 GOL GOL . 
J 3 GOL C 1 6 6 GOL GOL . 
K 3 GOL C 1 7 7 GOL GOL . 
L 3 GOL C 1 8 8 GOL GOL . 
M 3 GOL D 1 86 2 GOL GOL . 
N 6 HOH A 1 1 1 HOH HOH . 
N 6 HOH A 2 6 6 HOH HOH . 
N 6 HOH A 3 9 9 HOH HOH . 
N 6 HOH A 4 10 10 HOH HOH . 
N 6 HOH A 5 14 14 HOH HOH . 
N 6 HOH A 6 16 16 HOH HOH . 
N 6 HOH A 7 17 17 HOH HOH . 
N 6 HOH A 8 18 18 HOH HOH . 
N 6 HOH A 9 21 21 HOH HOH . 
N 6 HOH A 10 23 23 HOH HOH . 
N 6 HOH A 11 30 30 HOH HOH . 
N 6 HOH A 12 32 32 HOH HOH . 
N 6 HOH A 13 35 35 HOH HOH . 
N 6 HOH A 14 37 37 HOH HOH . 
N 6 HOH A 15 40 40 HOH HOH . 
N 6 HOH A 16 45 45 HOH HOH . 
N 6 HOH A 17 46 46 HOH HOH . 
N 6 HOH A 18 49 49 HOH HOH . 
N 6 HOH A 19 50 50 HOH HOH . 
N 6 HOH A 20 56 56 HOH HOH . 
N 6 HOH A 21 60 60 HOH HOH . 
N 6 HOH A 22 61 61 HOH HOH . 
N 6 HOH A 23 67 67 HOH HOH . 
N 6 HOH A 24 68 68 HOH HOH . 
N 6 HOH A 25 70 70 HOH HOH . 
N 6 HOH A 26 73 73 HOH HOH . 
N 6 HOH A 27 75 75 HOH HOH . 
N 6 HOH A 28 77 77 HOH HOH . 
N 6 HOH A 29 84 84 HOH HOH . 
N 6 HOH A 30 85 85 HOH HOH . 
N 6 HOH A 31 86 86 HOH HOH . 
N 6 HOH A 32 87 87 HOH HOH . 
N 6 HOH A 33 88 88 HOH HOH . 
N 6 HOH A 34 89 89 HOH HOH . 
N 6 HOH A 35 96 96 HOH HOH . 
N 6 HOH A 36 99 99 HOH HOH . 
N 6 HOH A 37 105 105 HOH HOH . 
N 6 HOH A 38 106 106 HOH HOH . 
N 6 HOH A 39 107 107 HOH HOH . 
N 6 HOH A 40 110 110 HOH HOH . 
N 6 HOH A 41 111 111 HOH HOH . 
N 6 HOH A 42 112 112 HOH HOH . 
N 6 HOH A 43 113 113 HOH HOH . 
N 6 HOH A 44 116 116 HOH HOH . 
N 6 HOH A 45 117 117 HOH HOH . 
N 6 HOH A 46 119 119 HOH HOH . 
N 6 HOH A 47 120 120 HOH HOH . 
N 6 HOH A 48 122 122 HOH HOH . 
N 6 HOH A 49 126 126 HOH HOH . 
N 6 HOH A 50 142 142 HOH HOH . 
N 6 HOH A 51 143 143 HOH HOH . 
N 6 HOH A 52 145 145 HOH HOH . 
N 6 HOH A 53 147 147 HOH HOH . 
N 6 HOH A 54 148 148 HOH HOH . 
N 6 HOH A 55 151 151 HOH HOH . 
N 6 HOH A 56 152 152 HOH HOH . 
N 6 HOH A 57 153 153 HOH HOH . 
N 6 HOH A 58 159 159 HOH HOH . 
N 6 HOH A 59 160 160 HOH HOH . 
N 6 HOH A 60 164 164 HOH HOH . 
N 6 HOH A 61 300 3 HOH HOH . 
N 6 HOH A 62 301 4 HOH HOH . 
O 6 HOH B 1 86 5 HOH HOH . 
O 6 HOH B 2 87 7 HOH HOH . 
O 6 HOH B 3 88 11 HOH HOH . 
O 6 HOH B 4 89 12 HOH HOH . 
O 6 HOH B 5 90 90 HOH HOH . 
O 6 HOH B 6 91 19 HOH HOH . 
O 6 HOH B 7 92 22 HOH HOH . 
O 6 HOH B 8 93 24 HOH HOH . 
O 6 HOH B 9 94 94 HOH HOH . 
O 6 HOH B 10 95 95 HOH HOH . 
O 6 HOH B 11 96 25 HOH HOH . 
O 6 HOH B 12 97 27 HOH HOH . 
O 6 HOH B 13 98 29 HOH HOH . 
O 6 HOH B 14 99 31 HOH HOH . 
O 6 HOH B 15 100 33 HOH HOH . 
O 6 HOH B 16 101 38 HOH HOH . 
O 6 HOH B 17 102 41 HOH HOH . 
O 6 HOH B 18 103 48 HOH HOH . 
O 6 HOH B 19 104 52 HOH HOH . 
O 6 HOH B 20 105 54 HOH HOH . 
O 6 HOH B 21 106 55 HOH HOH . 
O 6 HOH B 22 107 62 HOH HOH . 
O 6 HOH B 23 108 69 HOH HOH . 
O 6 HOH B 24 109 109 HOH HOH . 
O 6 HOH B 25 110 71 HOH HOH . 
O 6 HOH B 26 111 74 HOH HOH . 
O 6 HOH B 27 112 80 HOH HOH . 
O 6 HOH B 28 113 81 HOH HOH . 
O 6 HOH B 29 114 114 HOH HOH . 
O 6 HOH B 30 115 115 HOH HOH . 
O 6 HOH B 31 116 83 HOH HOH . 
O 6 HOH B 32 118 118 HOH HOH . 
O 6 HOH B 33 124 124 HOH HOH . 
O 6 HOH B 34 125 125 HOH HOH . 
O 6 HOH B 35 127 127 HOH HOH . 
O 6 HOH B 36 129 129 HOH HOH . 
O 6 HOH B 37 136 136 HOH HOH . 
O 6 HOH B 38 138 138 HOH HOH . 
O 6 HOH B 39 144 144 HOH HOH . 
O 6 HOH B 40 149 149 HOH HOH . 
O 6 HOH B 41 154 154 HOH HOH . 
O 6 HOH B 42 158 158 HOH HOH . 
P 6 HOH C 1 2 2 HOH HOH . 
P 6 HOH C 2 13 13 HOH HOH . 
P 6 HOH C 3 20 20 HOH HOH . 
P 6 HOH C 4 28 28 HOH HOH . 
P 6 HOH C 5 36 36 HOH HOH . 
P 6 HOH C 6 39 39 HOH HOH . 
P 6 HOH C 7 42 42 HOH HOH . 
P 6 HOH C 8 51 51 HOH HOH . 
P 6 HOH C 9 53 53 HOH HOH . 
P 6 HOH C 10 57 57 HOH HOH . 
P 6 HOH C 11 58 58 HOH HOH . 
P 6 HOH C 12 63 63 HOH HOH . 
P 6 HOH C 13 66 66 HOH HOH . 
P 6 HOH C 14 72 72 HOH HOH . 
P 6 HOH C 15 78 78 HOH HOH . 
P 6 HOH C 16 79 79 HOH HOH . 
P 6 HOH C 17 91 91 HOH HOH . 
P 6 HOH C 18 101 101 HOH HOH . 
P 6 HOH C 19 102 102 HOH HOH . 
P 6 HOH C 20 103 103 HOH HOH . 
P 6 HOH C 21 108 108 HOH HOH . 
P 6 HOH C 22 128 128 HOH HOH . 
P 6 HOH C 23 130 130 HOH HOH . 
P 6 HOH C 24 131 131 HOH HOH . 
P 6 HOH C 25 132 132 HOH HOH . 
P 6 HOH C 26 135 135 HOH HOH . 
P 6 HOH C 27 146 146 HOH HOH . 
P 6 HOH C 28 150 150 HOH HOH . 
P 6 HOH C 29 161 161 HOH HOH . 
P 6 HOH C 30 162 162 HOH HOH . 
P 6 HOH C 31 300 8 HOH HOH . 
Q 6 HOH D 1 87 15 HOH HOH . 
Q 6 HOH D 2 88 26 HOH HOH . 
Q 6 HOH D 3 89 34 HOH HOH . 
Q 6 HOH D 4 90 43 HOH HOH . 
Q 6 HOH D 5 91 44 HOH HOH . 
Q 6 HOH D 6 92 92 HOH HOH . 
Q 6 HOH D 7 93 93 HOH HOH . 
Q 6 HOH D 8 94 47 HOH HOH . 
Q 6 HOH D 9 95 59 HOH HOH . 
Q 6 HOH D 10 96 64 HOH HOH . 
Q 6 HOH D 11 97 97 HOH HOH . 
Q 6 HOH D 12 98 98 HOH HOH . 
Q 6 HOH D 13 99 65 HOH HOH . 
Q 6 HOH D 14 100 100 HOH HOH . 
Q 6 HOH D 15 101 76 HOH HOH . 
Q 6 HOH D 16 102 82 HOH HOH . 
Q 6 HOH D 17 104 104 HOH HOH . 
Q 6 HOH D 18 121 121 HOH HOH . 
Q 6 HOH D 19 123 123 HOH HOH . 
Q 6 HOH D 20 133 133 HOH HOH . 
Q 6 HOH D 21 134 134 HOH HOH . 
Q 6 HOH D 22 137 137 HOH HOH . 
Q 6 HOH D 23 139 139 HOH HOH . 
Q 6 HOH D 24 140 140 HOH HOH . 
Q 6 HOH D 25 141 141 HOH HOH . 
Q 6 HOH D 26 155 155 HOH HOH . 
Q 6 HOH D 27 156 156 HOH HOH . 
Q 6 HOH D 28 157 157 HOH HOH . 
Q 6 HOH D 29 163 163 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 3 6.807 30.604 -0.191 1 85.41 ? C1 GOL 6 C 1 
HETATM 2 O O1 GOL . . . J 3 7.146 31.282 -1.387 1 74.83 ? O1 GOL 6 C 1 
HETATM 3 C C2 GOL . . . J 3 7.022 31.504 1.033 1 91.51 ? C2 GOL 6 C 1 
HETATM 4 O O2 GOL . . . J 3 8.372 31.947 1.115 1 85.83 ? O2 GOL 6 C 1 
HETATM 5 C C3 GOL . . . J 3 6.601 30.759 2.307 1 85.4 ? C3 GOL 6 C 1 
HETATM 6 O O3 GOL . . . J 3 5.389 31.279 2.824 1 88.88 ? O3 GOL 6 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#