data_3VJH
#
_model_server_result.job_id            UKG5IDADzxZUGrppIe27yg 
_model_server_result.datetime_utc      '2024-11-23 19:22:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vjh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    3VJH 
#
_exptl.entry_id    3VJH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              423.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-[4-methoxy-3-({[4-(trifluoromethyl)benzoyl]amino}methyl)benzyl]pentanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.35 
_cell.angle_gamma         90 
_cell.entry_id            3VJH 
_cell.length_a            92.973 
_cell.length_b            60.489 
_cell.length_c            117.956 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VJH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D 1 1 
B,E 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 46.4865 30.2445 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C22 H24 F3 N O4' 
_chem_comp.formula_weight    423.425 
_chem_comp.id                J35 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-[4-methoxy-3-({[4-(trifluoromethyl)benzoyl]amino}methyl)benzyl]pentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C19 J35 doub 173 n n 
O2 C19 J35 sing 174 n n 
C19 C20 J35 sing 175 n n 
C20 C21 J35 sing 176 n n 
C20 C17 J35 sing 177 n n 
C22 C18 J35 sing 178 n n 
C18 C21 J35 sing 179 n n 
C17 C15 J35 sing 180 n n 
C14 C15 J35 doub 181 n y 
C14 C13 J35 sing 182 n y 
C15 C12 J35 sing 183 n y 
C13 C11 J35 doub 184 n y 
C12 C10 J35 doub 185 n y 
C11 C10 J35 sing 186 n y 
C11 O4 J35 sing 187 n n 
C10 C9 J35 sing 188 n n 
C8 O4 J35 sing 189 n n 
C9 N1 J35 sing 190 n n 
N1 C4 J35 sing 191 n n 
C4 O1 J35 doub 192 n n 
C4 C1 J35 sing 193 n n 
C3 C1 J35 doub 194 n y 
C3 C5 J35 sing 195 n y 
C1 C2 J35 sing 196 n y 
C5 C6 J35 doub 197 n y 
F2 C16 J35 sing 198 n n 
C2 C7 J35 doub 199 n y 
C6 C7 J35 sing 200 n y 
C6 C16 J35 sing 201 n n 
C16 F1 J35 sing 202 n n 
C16 F3 J35 sing 203 n n 
O2 H1 J35 sing 204 n n 
C20 H2 J35 sing 205 n n 
C21 H3 J35 sing 206 n n 
C21 H4 J35 sing 207 n n 
C18 H5 J35 sing 208 n n 
C18 H6 J35 sing 209 n n 
C22 H7 J35 sing 210 n n 
C22 H8 J35 sing 211 n n 
C22 H9 J35 sing 212 n n 
C17 H10 J35 sing 213 n n 
C17 H11 J35 sing 214 n n 
C14 H12 J35 sing 215 n n 
C13 H13 J35 sing 216 n n 
C8 H14 J35 sing 217 n n 
C8 H15 J35 sing 218 n n 
C8 H16 J35 sing 219 n n 
C12 H17 J35 sing 220 n n 
C9 H18 J35 sing 221 n n 
C9 H19 J35 sing 222 n n 
N1 H20 J35 sing 223 n n 
C3 H21 J35 sing 224 n n 
C5 H22 J35 sing 225 n n 
C2 H23 J35 sing 226 n n 
C7 H24 J35 sing 227 n n 
#
_atom_sites.entry_id                     3VJH 
_atom_sites.fract_transf_matrix[1][1]    0.010756 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002553 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008713 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 J35 A 1 501 1 J35 J35 . 
D 3 HOH A 1 601 1 HOH HOH . 
D 3 HOH A 2 602 2 HOH HOH . 
D 3 HOH A 3 603 3 HOH HOH . 
D 3 HOH A 4 604 4 HOH HOH . 
D 3 HOH A 5 605 7 HOH HOH . 
D 3 HOH A 6 606 9 HOH HOH . 
D 3 HOH A 7 607 10 HOH HOH . 
D 3 HOH A 8 608 11 HOH HOH . 
D 3 HOH A 9 609 12 HOH HOH . 
D 3 HOH A 10 610 14 HOH HOH . 
D 3 HOH A 11 611 15 HOH HOH . 
D 3 HOH A 12 612 16 HOH HOH . 
D 3 HOH A 13 613 17 HOH HOH . 
D 3 HOH A 14 614 19 HOH HOH . 
D 3 HOH A 15 615 23 HOH HOH . 
D 3 HOH A 16 616 24 HOH HOH . 
D 3 HOH A 17 617 28 HOH HOH . 
D 3 HOH A 18 618 29 HOH HOH . 
D 3 HOH A 19 619 30 HOH HOH . 
D 3 HOH A 20 620 32 HOH HOH . 
D 3 HOH A 21 621 38 HOH HOH . 
D 3 HOH A 22 622 39 HOH HOH . 
D 3 HOH A 23 623 40 HOH HOH . 
D 3 HOH A 24 624 41 HOH HOH . 
D 3 HOH A 25 625 49 HOH HOH . 
D 3 HOH A 26 626 52 HOH HOH . 
D 3 HOH A 27 627 55 HOH HOH . 
D 3 HOH A 28 628 56 HOH HOH . 
D 3 HOH A 29 629 58 HOH HOH . 
D 3 HOH A 30 630 60 HOH HOH . 
D 3 HOH A 31 631 61 HOH HOH . 
D 3 HOH A 32 632 64 HOH HOH . 
D 3 HOH A 33 633 65 HOH HOH . 
D 3 HOH A 34 634 68 HOH HOH . 
D 3 HOH A 35 635 69 HOH HOH . 
D 3 HOH A 36 636 70 HOH HOH . 
D 3 HOH A 37 637 73 HOH HOH . 
D 3 HOH A 38 638 75 HOH HOH . 
D 3 HOH A 39 639 76 HOH HOH . 
D 3 HOH A 40 640 77 HOH HOH . 
D 3 HOH A 41 641 78 HOH HOH . 
D 3 HOH A 42 642 79 HOH HOH . 
D 3 HOH A 43 643 80 HOH HOH . 
E 3 HOH B 1 501 5 HOH HOH . 
E 3 HOH B 2 502 6 HOH HOH . 
E 3 HOH B 3 503 8 HOH HOH . 
E 3 HOH B 4 504 13 HOH HOH . 
E 3 HOH B 5 505 18 HOH HOH . 
E 3 HOH B 6 506 20 HOH HOH . 
E 3 HOH B 7 507 21 HOH HOH . 
E 3 HOH B 8 508 22 HOH HOH . 
E 3 HOH B 9 509 25 HOH HOH . 
E 3 HOH B 10 510 26 HOH HOH . 
E 3 HOH B 11 511 27 HOH HOH . 
E 3 HOH B 12 512 31 HOH HOH . 
E 3 HOH B 13 513 33 HOH HOH . 
E 3 HOH B 14 514 34 HOH HOH . 
E 3 HOH B 15 515 35 HOH HOH . 
E 3 HOH B 16 516 36 HOH HOH . 
E 3 HOH B 17 517 37 HOH HOH . 
E 3 HOH B 18 518 42 HOH HOH . 
E 3 HOH B 19 519 43 HOH HOH . 
E 3 HOH B 20 520 44 HOH HOH . 
E 3 HOH B 21 521 45 HOH HOH . 
E 3 HOH B 22 522 46 HOH HOH . 
E 3 HOH B 23 523 47 HOH HOH . 
E 3 HOH B 24 524 48 HOH HOH . 
E 3 HOH B 25 525 50 HOH HOH . 
E 3 HOH B 26 526 51 HOH HOH . 
E 3 HOH B 27 527 53 HOH HOH . 
E 3 HOH B 28 528 54 HOH HOH . 
E 3 HOH B 29 529 57 HOH HOH . 
E 3 HOH B 30 530 59 HOH HOH . 
E 3 HOH B 31 531 62 HOH HOH . 
E 3 HOH B 32 532 63 HOH HOH . 
E 3 HOH B 33 533 66 HOH HOH . 
E 3 HOH B 34 534 67 HOH HOH . 
E 3 HOH B 35 535 71 HOH HOH . 
E 3 HOH B 36 536 72 HOH HOH . 
E 3 HOH B 37 537 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 J35 . . . C 2 -20.055 18.635 -20.462 1 63.49 ? O2 J35 501 A 1 
HETATM 2 C C19 J35 . . . C 2 -18.96 18.827 -19.883 1 65.5 ? C19 J35 501 A 1 
HETATM 3 O O3 J35 . . . C 2 -17.924 19.009 -20.565 1 58.34 ? O3 J35 501 A 1 
HETATM 4 C C20 J35 . . . C 2 -18.878 18.865 -18.36 1 68.41 ? C20 J35 501 A 1 
HETATM 5 C C21 J35 . . . C 2 -20.064 19.607 -17.739 1 67.12 ? C21 J35 501 A 1 
HETATM 6 C C18 J35 . . . C 2 -19.926 21.116 -17.848 1 66.81 ? C18 J35 501 A 1 
HETATM 7 C C22 J35 . . . C 2 -21.267 21.738 -18.148 1 67.51 ? C22 J35 501 A 1 
HETATM 8 C C17 J35 . . . C 2 -18.824 17.47 -17.708 1 72.84 ? C17 J35 501 A 1 
HETATM 9 C C15 J35 . . . C 2 -17.944 17.485 -16.465 1 75.47 ? C15 J35 501 A 1 
HETATM 10 C C14 J35 . . . C 2 -16.587 17.687 -16.658 1 79.09 ? C14 J35 501 A 1 
HETATM 11 C C13 J35 . . . C 2 -15.707 17.716 -15.585 1 81.46 ? C13 J35 501 A 1 
HETATM 12 C C11 J35 . . . C 2 -16.171 17.533 -14.289 1 85.09 ? C11 J35 501 A 1 
HETATM 13 O O4 J35 . . . C 2 -15.27 17.562 -13.245 1 90.18 ? O4 J35 501 A 1 
HETATM 14 C C8 J35 . . . C 2 -14.03 16.846 -13.308 1 87.82 ? C8 J35 501 A 1 
HETATM 15 C C12 J35 . . . C 2 -18.424 17.301 -15.159 1 79.35 ? C12 J35 501 A 1 
HETATM 16 C C10 J35 . . . C 2 -17.532 17.326 -14.069 1 83.76 ? C10 J35 501 A 1 
HETATM 17 C C9 J35 . . . C 2 -18.016 17.137 -12.642 1 86.64 ? C9 J35 501 A 1 
HETATM 18 N N1 J35 . . . C 2 -17.643 18.307 -11.848 1 92.25 ? N1 J35 501 A 1 
HETATM 19 C C4 J35 . . . C 2 -16.796 18.46 -10.822 1 95.38 ? C4 J35 501 A 1 
HETATM 20 O O1 J35 . . . C 2 -16.147 17.54 -10.353 1 100.74 ? O1 J35 501 A 1 
HETATM 21 C C1 J35 . . . C 2 -16.629 19.837 -10.242 1 93.65 ? C1 J35 501 A 1 
HETATM 22 C C3 J35 . . . C 2 -15.424 20.515 -10.426 1 93.83 ? C3 J35 501 A 1 
HETATM 23 C C5 J35 . . . C 2 -15.249 21.795 -9.907 1 92.07 ? C5 J35 501 A 1 
HETATM 24 C C2 J35 . . . C 2 -17.663 20.449 -9.538 1 90.56 ? C2 J35 501 A 1 
HETATM 25 C C7 J35 . . . C 2 -17.489 21.732 -9.02 1 90.52 ? C7 J35 501 A 1 
HETATM 26 C C6 J35 . . . C 2 -16.281 22.411 -9.201 1 92.4 ? C6 J35 501 A 1 
HETATM 27 C C16 J35 . . . C 2 -16.071 23.796 -8.648 1 98.17 ? C16 J35 501 A 1 
HETATM 28 F F1 J35 . . . C 2 -14.905 23.837 -8.025 1 100.18 ? F1 J35 501 A 1 
HETATM 29 F F3 J35 . . . C 2 -17.043 24.134 -7.81 1 97.19 ? F3 J35 501 A 1 
HETATM 30 F F2 J35 . . . C 2 -16.047 24.661 -9.645 1 100.02 ? F2 J35 501 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           30 
#