data_3VLL # _model_server_result.job_id k7zh6YY1IGKXZlvJHrv47A _model_server_result.datetime_utc '2024-11-23 00:27:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 3VLL # _exptl.entry_id 3VLL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 153.135 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SALICYLHYDROXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.32 _cell.angle_gamma 90 _cell.entry_id 3VLL _cell.length_a 150.187 _cell.length_b 76.32 _cell.length_c 140.235 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 259 A HIS 259 1_555 C FE HEM . A HEM 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc2 B NE2 HIS 259 B HIS 259 1_555 E FE HEM . B HEM 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'C7 H7 N O3' _chem_comp.formula_weight 153.135 _chem_comp.id SHA _chem_comp.mon_nstd_flag . _chem_comp.name 'SALICYLHYDROXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 SHA doub 359 n y C1 C6 SHA sing 360 n y C1 C7 SHA sing 361 n n C2 C3 SHA sing 362 n y C2 H2 SHA sing 363 n n C3 C4 SHA doub 364 n y C3 H3 SHA sing 365 n n C4 C5 SHA sing 366 n y C4 H4 SHA sing 367 n n C5 C6 SHA doub 368 n y C5 H5 SHA sing 369 n n C6 O6 SHA sing 370 n n O6 HO6 SHA sing 371 n n C7 O7 SHA doub 372 n n C7 N8 SHA sing 373 n n N8 O9 SHA sing 374 n n N8 HN8 SHA sing 375 n n O9 HO9 SHA sing 376 n n # _atom_sites.entry_id 3VLL _atom_sites.fract_transf_matrix[1][1] 0.006658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00027 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 800 800 HEM HEM . D 3 SHA A 1 801 801 SHA SHA . E 2 HEM B 1 800 800 HEM HEM . F 3 SHA B 1 801 801 SHA SHA . G 4 HOH A 1 901 2 HOH TIP . G 4 HOH A 2 902 3 HOH TIP . G 4 HOH A 3 903 5 HOH TIP . G 4 HOH A 4 904 6 HOH TIP . G 4 HOH A 5 905 7 HOH TIP . G 4 HOH A 6 906 8 HOH TIP . G 4 HOH A 7 907 9 HOH TIP . G 4 HOH A 8 908 10 HOH TIP . G 4 HOH A 9 909 11 HOH TIP . G 4 HOH A 10 910 12 HOH TIP . G 4 HOH A 11 911 13 HOH TIP . G 4 HOH A 12 912 14 HOH TIP . G 4 HOH A 13 913 15 HOH TIP . G 4 HOH A 14 914 16 HOH TIP . G 4 HOH A 15 915 17 HOH TIP . G 4 HOH A 16 916 18 HOH TIP . G 4 HOH A 17 917 20 HOH TIP . G 4 HOH A 18 918 22 HOH TIP . G 4 HOH A 19 919 23 HOH TIP . G 4 HOH A 20 920 25 HOH TIP . G 4 HOH A 21 921 26 HOH TIP . G 4 HOH A 22 922 27 HOH TIP . G 4 HOH A 23 923 28 HOH TIP . G 4 HOH A 24 924 30 HOH TIP . G 4 HOH A 25 925 31 HOH TIP . G 4 HOH A 26 926 32 HOH TIP . G 4 HOH A 27 927 33 HOH TIP . G 4 HOH A 28 928 34 HOH TIP . G 4 HOH A 29 929 36 HOH TIP . G 4 HOH A 30 930 37 HOH TIP . G 4 HOH A 31 931 39 HOH TIP . G 4 HOH A 32 932 40 HOH TIP . G 4 HOH A 33 933 41 HOH TIP . G 4 HOH A 34 934 42 HOH TIP . G 4 HOH A 35 935 43 HOH TIP . G 4 HOH A 36 936 44 HOH TIP . G 4 HOH A 37 937 45 HOH TIP . G 4 HOH A 38 938 46 HOH TIP . G 4 HOH A 39 939 47 HOH TIP . G 4 HOH A 40 940 48 HOH TIP . G 4 HOH A 41 941 49 HOH TIP . G 4 HOH A 42 942 50 HOH TIP . G 4 HOH A 43 943 51 HOH TIP . G 4 HOH A 44 944 52 HOH TIP . G 4 HOH A 45 945 55 HOH TIP . G 4 HOH A 46 946 56 HOH TIP . G 4 HOH A 47 947 58 HOH TIP . G 4 HOH A 48 948 59 HOH TIP . G 4 HOH A 49 949 60 HOH TIP . G 4 HOH A 50 950 61 HOH TIP . G 4 HOH A 51 951 62 HOH TIP . G 4 HOH A 52 952 65 HOH TIP . G 4 HOH A 53 953 66 HOH TIP . G 4 HOH A 54 954 67 HOH TIP . G 4 HOH A 55 955 68 HOH TIP . G 4 HOH A 56 956 69 HOH TIP . G 4 HOH A 57 957 70 HOH TIP . G 4 HOH A 58 958 73 HOH TIP . G 4 HOH A 59 959 75 HOH TIP . G 4 HOH A 60 960 76 HOH TIP . G 4 HOH A 61 961 78 HOH TIP . G 4 HOH A 62 962 80 HOH TIP . G 4 HOH A 63 963 81 HOH TIP . G 4 HOH A 64 964 82 HOH TIP . G 4 HOH A 65 965 83 HOH TIP . G 4 HOH A 66 966 84 HOH TIP . G 4 HOH A 67 967 86 HOH TIP . G 4 HOH A 68 968 88 HOH TIP . G 4 HOH A 69 969 89 HOH TIP . G 4 HOH A 70 970 90 HOH TIP . G 4 HOH A 71 971 92 HOH TIP . G 4 HOH A 72 972 93 HOH TIP . G 4 HOH A 73 973 96 HOH TIP . G 4 HOH A 74 974 97 HOH TIP . G 4 HOH A 75 975 105 HOH TIP . G 4 HOH A 76 976 106 HOH TIP . G 4 HOH A 77 977 108 HOH TIP . G 4 HOH A 78 978 110 HOH TIP . G 4 HOH A 79 979 111 HOH TIP . G 4 HOH A 80 980 112 HOH TIP . G 4 HOH A 81 981 114 HOH TIP . G 4 HOH A 82 982 115 HOH TIP . G 4 HOH A 83 983 116 HOH TIP . G 4 HOH A 84 984 117 HOH TIP . G 4 HOH A 85 985 120 HOH TIP . G 4 HOH A 86 986 122 HOH TIP . G 4 HOH A 87 987 125 HOH TIP . G 4 HOH A 88 988 127 HOH TIP . G 4 HOH A 89 989 129 HOH TIP . G 4 HOH A 90 990 131 HOH TIP . G 4 HOH A 91 991 133 HOH TIP . G 4 HOH A 92 992 134 HOH TIP . G 4 HOH A 93 993 136 HOH TIP . G 4 HOH A 94 994 137 HOH TIP . G 4 HOH A 95 995 138 HOH TIP . G 4 HOH A 96 996 142 HOH TIP . G 4 HOH A 97 997 143 HOH TIP . G 4 HOH A 98 998 145 HOH TIP . G 4 HOH A 99 999 147 HOH TIP . G 4 HOH A 100 1000 150 HOH TIP . G 4 HOH A 101 1001 153 HOH TIP . G 4 HOH A 102 1002 154 HOH TIP . G 4 HOH A 103 1003 156 HOH TIP . G 4 HOH A 104 1004 157 HOH TIP . G 4 HOH A 105 1005 159 HOH TIP . G 4 HOH A 106 1006 160 HOH TIP . G 4 HOH A 107 1007 161 HOH TIP . G 4 HOH A 108 1008 162 HOH TIP . G 4 HOH A 109 1009 163 HOH TIP . G 4 HOH A 110 1010 167 HOH TIP . G 4 HOH A 111 1011 169 HOH TIP . G 4 HOH A 112 1012 170 HOH TIP . G 4 HOH A 113 1013 172 HOH TIP . G 4 HOH A 114 1014 174 HOH TIP . G 4 HOH A 115 1015 176 HOH TIP . G 4 HOH A 116 1016 177 HOH TIP . G 4 HOH A 117 1017 178 HOH TIP . G 4 HOH A 118 1018 180 HOH TIP . G 4 HOH A 119 1019 181 HOH TIP . G 4 HOH A 120 1020 182 HOH TIP . G 4 HOH A 121 1021 189 HOH TIP . G 4 HOH A 122 1022 190 HOH TIP . G 4 HOH A 123 1023 191 HOH TIP . G 4 HOH A 124 1024 194 HOH TIP . G 4 HOH A 125 1025 196 HOH TIP . G 4 HOH A 126 1026 201 HOH TIP . G 4 HOH A 127 1027 203 HOH TIP . G 4 HOH A 128 1028 204 HOH TIP . G 4 HOH A 129 1029 206 HOH TIP . G 4 HOH A 130 1030 207 HOH TIP . G 4 HOH A 131 1031 209 HOH TIP . G 4 HOH A 132 1032 210 HOH TIP . G 4 HOH A 133 1033 211 HOH TIP . G 4 HOH A 134 1034 212 HOH TIP . G 4 HOH A 135 1035 215 HOH TIP . G 4 HOH A 136 1036 216 HOH TIP . G 4 HOH A 137 1037 218 HOH TIP . G 4 HOH A 138 1038 219 HOH TIP . G 4 HOH A 139 1039 221 HOH TIP . G 4 HOH A 140 1040 222 HOH TIP . G 4 HOH A 141 1041 225 HOH TIP . G 4 HOH A 142 1042 227 HOH TIP . G 4 HOH A 143 1043 229 HOH TIP . G 4 HOH A 144 1044 233 HOH TIP . G 4 HOH A 145 1045 235 HOH TIP . G 4 HOH A 146 1046 240 HOH TIP . G 4 HOH A 147 1047 241 HOH TIP . G 4 HOH A 148 1048 242 HOH TIP . G 4 HOH A 149 1049 243 HOH TIP . H 4 HOH B 1 901 1 HOH TIP . H 4 HOH B 2 902 4 HOH TIP . H 4 HOH B 3 903 19 HOH TIP . H 4 HOH B 4 904 21 HOH TIP . H 4 HOH B 5 905 24 HOH TIP . H 4 HOH B 6 906 29 HOH TIP . H 4 HOH B 7 907 35 HOH TIP . H 4 HOH B 8 908 38 HOH TIP . H 4 HOH B 9 909 53 HOH TIP . H 4 HOH B 10 910 54 HOH TIP . H 4 HOH B 11 911 57 HOH TIP . H 4 HOH B 12 912 63 HOH TIP . H 4 HOH B 13 913 64 HOH TIP . H 4 HOH B 14 914 71 HOH TIP . H 4 HOH B 15 915 72 HOH TIP . H 4 HOH B 16 916 74 HOH TIP . H 4 HOH B 17 917 77 HOH TIP . H 4 HOH B 18 918 79 HOH TIP . H 4 HOH B 19 919 85 HOH TIP . H 4 HOH B 20 920 87 HOH TIP . H 4 HOH B 21 921 91 HOH TIP . H 4 HOH B 22 922 94 HOH TIP . H 4 HOH B 23 923 95 HOH TIP . H 4 HOH B 24 924 98 HOH TIP . H 4 HOH B 25 925 99 HOH TIP . H 4 HOH B 26 926 100 HOH TIP . H 4 HOH B 27 927 101 HOH TIP . H 4 HOH B 28 928 102 HOH TIP . H 4 HOH B 29 929 103 HOH TIP . H 4 HOH B 30 930 104 HOH TIP . H 4 HOH B 31 931 107 HOH TIP . H 4 HOH B 32 932 109 HOH TIP . H 4 HOH B 33 933 113 HOH TIP . H 4 HOH B 34 934 118 HOH TIP . H 4 HOH B 35 935 119 HOH TIP . H 4 HOH B 36 936 121 HOH TIP . H 4 HOH B 37 937 123 HOH TIP . H 4 HOH B 38 938 124 HOH TIP . H 4 HOH B 39 939 126 HOH TIP . H 4 HOH B 40 940 128 HOH TIP . H 4 HOH B 41 941 130 HOH TIP . H 4 HOH B 42 942 132 HOH TIP . H 4 HOH B 43 943 135 HOH TIP . H 4 HOH B 44 944 139 HOH TIP . H 4 HOH B 45 945 140 HOH TIP . H 4 HOH B 46 946 141 HOH TIP . H 4 HOH B 47 947 144 HOH TIP . H 4 HOH B 48 948 146 HOH TIP . H 4 HOH B 49 949 148 HOH TIP . H 4 HOH B 50 950 149 HOH TIP . H 4 HOH B 51 951 151 HOH TIP . H 4 HOH B 52 952 152 HOH TIP . H 4 HOH B 53 953 155 HOH TIP . H 4 HOH B 54 954 158 HOH TIP . H 4 HOH B 55 955 164 HOH TIP . H 4 HOH B 56 956 165 HOH TIP . H 4 HOH B 57 957 166 HOH TIP . H 4 HOH B 58 958 168 HOH TIP . H 4 HOH B 59 959 171 HOH TIP . H 4 HOH B 60 960 173 HOH TIP . H 4 HOH B 61 961 175 HOH TIP . H 4 HOH B 62 962 179 HOH TIP . H 4 HOH B 63 963 183 HOH TIP . H 4 HOH B 64 964 184 HOH TIP . H 4 HOH B 65 965 185 HOH TIP . H 4 HOH B 66 966 186 HOH TIP . H 4 HOH B 67 967 187 HOH TIP . H 4 HOH B 68 968 188 HOH TIP . H 4 HOH B 69 969 192 HOH TIP . H 4 HOH B 70 970 193 HOH TIP . H 4 HOH B 71 971 195 HOH TIP . H 4 HOH B 72 972 197 HOH TIP . H 4 HOH B 73 973 198 HOH TIP . H 4 HOH B 74 974 199 HOH TIP . H 4 HOH B 75 975 200 HOH TIP . H 4 HOH B 76 976 202 HOH TIP . H 4 HOH B 77 977 205 HOH TIP . H 4 HOH B 78 978 208 HOH TIP . H 4 HOH B 79 979 213 HOH TIP . H 4 HOH B 80 980 214 HOH TIP . H 4 HOH B 81 981 217 HOH TIP . H 4 HOH B 82 982 220 HOH TIP . H 4 HOH B 83 983 223 HOH TIP . H 4 HOH B 84 984 224 HOH TIP . H 4 HOH B 85 985 226 HOH TIP . H 4 HOH B 86 986 228 HOH TIP . H 4 HOH B 87 987 230 HOH TIP . H 4 HOH B 88 988 231 HOH TIP . H 4 HOH B 89 989 232 HOH TIP . H 4 HOH B 90 990 236 HOH TIP . H 4 HOH B 91 991 237 HOH TIP . H 4 HOH B 92 992 238 HOH TIP . H 4 HOH B 93 993 239 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SHA . . . F 3 123.648 40.865 5.882 0.84 51.28 ? C1 SHA 801 B 1 HETATM 2 C C2 SHA . . . F 3 122.636 40 6.349 0.84 51.32 ? C2 SHA 801 B 1 HETATM 3 C C3 SHA . . . F 3 121.291 40.275 6.105 0.84 51.38 ? C3 SHA 801 B 1 HETATM 4 C C4 SHA . . . F 3 120.903 41.463 5.445 0.84 51.93 ? C4 SHA 801 B 1 HETATM 5 C C5 SHA . . . F 3 121.877 42.357 4.988 0.84 51.26 ? C5 SHA 801 B 1 HETATM 6 C C6 SHA . . . F 3 123.249 42.107 5.233 0.84 51.67 ? C6 SHA 801 B 1 HETATM 7 O O6 SHA . . . F 3 124.172 42.985 4.777 0.84 51.42 ? O6 SHA 801 B 1 HETATM 8 C C7 SHA . . . F 3 125.095 40.56 6.18 0.84 51.41 ? C7 SHA 801 B 1 HETATM 9 O O7 SHA . . . F 3 125.986 41.305 5.797 0.84 49.8 ? O7 SHA 801 B 1 HETATM 10 N N8 SHA . . . F 3 125.418 39.396 6.814 0.84 51.29 ? N8 SHA 801 B 1 HETATM 11 O O9 SHA . . . F 3 126.771 39.082 7.058 0.84 51.63 ? O9 SHA 801 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #