data_3VMM
#
_model_server_result.job_id            zD-OI0axojawUpVEK3b5GA 
_model_server_result.datetime_utc      '2024-11-12 20:28:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3vmm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    3VMM 
#
_exptl.entry_id    3VMM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3VMM 
_cell.length_a            130.787 
_cell.length_b            130.787 
_cell.length_c            147.742 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VMM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 111 A GLU 109 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? 
metalc ? metalc2 A O LEU 184 A LEU 182 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? 
metalc ? metalc3 A OE1 GLU 313 A GLU 311 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc4 A OE2 GLU 326 A GLU 324 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc5 A OE1 GLU 326 A GLU 324 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc6 B MG MG . A MG 501 1_555 D O1B ADP . A ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc7 B MG MG . A MG 501 1_555 D O1A ADP . A ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc8 B MG MG . A MG 501 1_555 E O5P P0D . A P0D 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc9 B MG MG . A MG 501 1_555 F O HOH . A HOH 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc10 C MG MG . A MG 502 1_555 D O3B ADP . A ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? 
metalc ? metalc11 C MG MG . A MG 502 1_555 E O3P P0D . A P0D 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? 
metalc ? metalc12 C MG MG . A MG 502 1_555 F O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3VMM 
_atom_sites.fract_transf_matrix[1][1]    0.007646 
_atom_sites.fract_transf_matrix[1][2]    0.004414 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008829 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006769 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 501 501 MG MG . 
C 2 MG A 1 502 502 MG MG . 
D 3 ADP A 1 503 503 ADP ADP . 
E 4 P0D A 1 504 504 P0D P0D . 
F 5 HOH A 1 601 1 HOH HOH . 
F 5 HOH A 2 602 2 HOH HOH . 
F 5 HOH A 3 603 3 HOH HOH . 
F 5 HOH A 4 604 4 HOH HOH . 
F 5 HOH A 5 605 5 HOH HOH . 
F 5 HOH A 6 606 6 HOH HOH . 
F 5 HOH A 7 607 7 HOH HOH . 
F 5 HOH A 8 608 8 HOH HOH . 
F 5 HOH A 9 609 9 HOH HOH . 
F 5 HOH A 10 610 10 HOH HOH . 
F 5 HOH A 11 611 11 HOH HOH . 
F 5 HOH A 12 612 12 HOH HOH . 
F 5 HOH A 13 613 13 HOH HOH . 
F 5 HOH A 14 614 16 HOH HOH . 
F 5 HOH A 15 615 17 HOH HOH . 
F 5 HOH A 16 616 18 HOH HOH . 
F 5 HOH A 17 617 20 HOH HOH . 
F 5 HOH A 18 618 21 HOH HOH . 
F 5 HOH A 19 619 23 HOH HOH . 
F 5 HOH A 20 620 27 HOH HOH . 
F 5 HOH A 21 621 28 HOH HOH . 
F 5 HOH A 22 622 30 HOH HOH . 
F 5 HOH A 23 623 31 HOH HOH . 
F 5 HOH A 24 624 34 HOH HOH . 
F 5 HOH A 25 625 35 HOH HOH . 
F 5 HOH A 26 626 36 HOH HOH . 
F 5 HOH A 27 627 37 HOH HOH . 
F 5 HOH A 28 628 38 HOH HOH . 
F 5 HOH A 29 629 39 HOH HOH . 
F 5 HOH A 30 630 41 HOH HOH . 
F 5 HOH A 31 631 43 HOH HOH . 
F 5 HOH A 32 632 44 HOH HOH . 
F 5 HOH A 33 633 48 HOH HOH . 
F 5 HOH A 34 634 49 HOH HOH . 
F 5 HOH A 35 635 50 HOH HOH . 
F 5 HOH A 36 636 52 HOH HOH . 
F 5 HOH A 37 637 53 HOH HOH . 
F 5 HOH A 38 638 55 HOH HOH . 
F 5 HOH A 39 639 56 HOH HOH . 
F 5 HOH A 40 640 57 HOH HOH . 
F 5 HOH A 41 641 59 HOH HOH . 
F 5 HOH A 42 642 60 HOH HOH . 
F 5 HOH A 43 643 62 HOH HOH . 
F 5 HOH A 44 644 63 HOH HOH . 
F 5 HOH A 45 645 64 HOH HOH . 
F 5 HOH A 46 646 65 HOH HOH . 
F 5 HOH A 47 647 67 HOH HOH . 
F 5 HOH A 48 648 68 HOH HOH . 
F 5 HOH A 49 649 69 HOH HOH . 
F 5 HOH A 50 650 70 HOH HOH . 
F 5 HOH A 51 651 71 HOH HOH . 
F 5 HOH A 52 652 73 HOH HOH . 
F 5 HOH A 53 653 75 HOH HOH . 
F 5 HOH A 54 654 76 HOH HOH . 
F 5 HOH A 55 655 77 HOH HOH . 
F 5 HOH A 56 656 78 HOH HOH . 
F 5 HOH A 57 657 79 HOH HOH . 
F 5 HOH A 58 658 82 HOH HOH . 
F 5 HOH A 59 659 87 HOH HOH . 
F 5 HOH A 60 660 88 HOH HOH . 
F 5 HOH A 61 661 89 HOH HOH . 
F 5 HOH A 62 662 90 HOH HOH . 
F 5 HOH A 63 663 91 HOH HOH . 
F 5 HOH A 64 664 95 HOH HOH . 
F 5 HOH A 65 665 99 HOH HOH . 
F 5 HOH A 66 666 103 HOH HOH . 
F 5 HOH A 67 667 104 HOH HOH . 
F 5 HOH A 68 668 105 HOH HOH . 
F 5 HOH A 69 669 107 HOH HOH . 
F 5 HOH A 70 670 108 HOH HOH . 
F 5 HOH A 71 671 109 HOH HOH . 
F 5 HOH A 72 672 110 HOH HOH . 
F 5 HOH A 73 673 114 HOH HOH . 
F 5 HOH A 74 674 115 HOH HOH . 
F 5 HOH A 75 675 116 HOH HOH . 
F 5 HOH A 76 676 117 HOH HOH . 
F 5 HOH A 77 677 119 HOH HOH . 
F 5 HOH A 78 678 121 HOH HOH . 
F 5 HOH A 79 679 122 HOH HOH . 
F 5 HOH A 80 680 124 HOH HOH . 
F 5 HOH A 81 681 127 HOH HOH . 
F 5 HOH A 82 682 128 HOH HOH . 
F 5 HOH A 83 683 131 HOH HOH . 
F 5 HOH A 84 684 132 HOH HOH . 
F 5 HOH A 85 685 133 HOH HOH . 
F 5 HOH A 86 686 138 HOH HOH . 
F 5 HOH A 87 687 139 HOH HOH . 
F 5 HOH A 88 688 141 HOH HOH . 
F 5 HOH A 89 689 143 HOH HOH . 
F 5 HOH A 90 690 145 HOH HOH . 
F 5 HOH A 91 691 146 HOH HOH . 
F 5 HOH A 92 692 147 HOH HOH . 
F 5 HOH A 93 693 148 HOH HOH . 
F 5 HOH A 94 694 149 HOH HOH . 
F 5 HOH A 95 695 150 HOH HOH . 
F 5 HOH A 96 696 153 HOH HOH . 
F 5 HOH A 97 697 154 HOH HOH . 
F 5 HOH A 98 698 155 HOH HOH . 
F 5 HOH A 99 699 156 HOH HOH . 
F 5 HOH A 100 700 157 HOH HOH . 
F 5 HOH A 101 701 158 HOH HOH . 
F 5 HOH A 102 702 159 HOH HOH . 
F 5 HOH A 103 703 160 HOH HOH . 
F 5 HOH A 104 704 161 HOH HOH . 
F 5 HOH A 105 705 163 HOH HOH . 
F 5 HOH A 106 706 164 HOH HOH . 
F 5 HOH A 107 707 165 HOH HOH . 
F 5 HOH A 108 708 166 HOH HOH . 
F 5 HOH A 109 709 167 HOH HOH . 
F 5 HOH A 110 710 168 HOH HOH . 
F 5 HOH A 111 711 169 HOH HOH . 
F 5 HOH A 112 712 170 HOH HOH . 
F 5 HOH A 113 713 171 HOH HOH . 
F 5 HOH A 114 714 172 HOH HOH . 
F 5 HOH A 115 715 173 HOH HOH . 
F 5 HOH A 116 716 174 HOH HOH . 
F 5 HOH A 117 717 175 HOH HOH . 
F 5 HOH A 118 718 176 HOH HOH . 
F 5 HOH A 119 719 177 HOH HOH . 
F 5 HOH A 120 720 178 HOH HOH . 
F 5 HOH A 121 721 179 HOH HOH . 
F 5 HOH A 122 722 180 HOH HOH . 
F 5 HOH A 123 723 181 HOH HOH . 
F 5 HOH A 124 724 182 HOH HOH . 
F 5 HOH A 125 725 183 HOH HOH . 
F 5 HOH A 126 726 184 HOH HOH . 
F 5 HOH A 127 727 185 HOH HOH . 
F 5 HOH A 128 728 186 HOH HOH . 
F 5 HOH A 129 729 187 HOH HOH . 
F 5 HOH A 130 730 189 HOH HOH . 
F 5 HOH A 131 731 190 HOH HOH . 
F 5 HOH A 132 732 192 HOH HOH . 
F 5 HOH A 133 733 193 HOH HOH . 
F 5 HOH A 134 734 194 HOH HOH . 
F 5 HOH A 135 735 195 HOH HOH . 
F 5 HOH A 136 736 196 HOH HOH . 
F 5 HOH A 137 737 197 HOH HOH . 
F 5 HOH A 138 738 198 HOH HOH . 
F 5 HOH A 139 739 199 HOH HOH . 
F 5 HOH A 140 740 200 HOH HOH . 
F 5 HOH A 141 741 201 HOH HOH . 
F 5 HOH A 142 742 202 HOH HOH . 
F 5 HOH A 143 743 203 HOH HOH . 
F 5 HOH A 144 744 204 HOH HOH . 
F 5 HOH A 145 745 205 HOH HOH . 
F 5 HOH A 146 746 206 HOH HOH . 
F 5 HOH A 147 747 207 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               2.027 
_atom_site.Cartn_y               -41.79 
_atom_site.Cartn_z               -6.412 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        47.7 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#