data_3VOB # _model_server_result.job_id K0rijRqnAMHOVizW-13lww _model_server_result.datetime_utc '2024-11-05 04:35:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3vob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 3VOB # _exptl.entry_id 3VOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.747 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.95 _cell.angle_gamma 90 _cell.entry_id 3VOB _cell.length_a 72.095 _cell.length_b 50.507 _cell.length_c 88.288 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3VOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 192 A LEU 200 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc2 A O VAL 195 A VAL 203 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc3 A OD1 ASN 200 A ASN 208 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc4 A O LEU 201 A LEU 209 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc5 B CA CA . A CA 401 1_555 D O 9PC . A 9PC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.116 ? metalc ? metalc6 B CA CA . A CA 401 1_555 E O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? # _chem_comp.formula 'C14 H8 Cl F2 N3 O2 S' _chem_comp.formula_weight 355.747 _chem_comp.id 9PC _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PC190723 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C 9PC doub 1 n n C C1 9PC sing 2 n n C N 9PC sing 3 n n F C2 9PC sing 4 n n C1 C2 9PC doub 5 n y C1 C13 9PC sing 6 n y C2 C3 9PC sing 7 n y F1 C13 9PC sing 8 n n C13 C5 9PC doub 9 n y C3 C4 9PC doub 10 n y S C9 9PC sing 11 n y S C7 9PC sing 12 n y C5 C4 9PC sing 13 n y C5 O1 9PC sing 14 n n N2 C9 9PC doub 15 n y N2 C10 9PC sing 16 n y C6 O1 9PC sing 17 n n C6 C7 9PC sing 18 n n C9 C8 9PC sing 19 n y C7 N1 9PC doub 20 n y C10 C11 9PC doub 21 n y C8 N1 9PC sing 22 n y C8 C12 9PC doub 23 n y C11 C12 9PC sing 24 n y C11 CL 9PC sing 25 n n C12 H1 9PC sing 26 n n N H2 9PC sing 27 n n N H3 9PC sing 28 n n C3 H4 9PC sing 29 n n C4 H5 9PC sing 30 n n C6 H6 9PC sing 31 n n C6 H7 9PC sing 32 n n C10 H8 9PC sing 33 n n # _atom_sites.entry_id 3VOB _atom_sites.fract_transf_matrix[1][1] 0.013871 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005311 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 401 1 CA CA . C 3 GDP A 1 402 1 GDP GDP . D 4 9PC A 1 403 1 9PC PC1 . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 2 HOH HOH . E 5 HOH A 3 503 3 HOH HOH . E 5 HOH A 4 504 4 HOH HOH . E 5 HOH A 5 505 5 HOH HOH . E 5 HOH A 6 506 6 HOH HOH . E 5 HOH A 7 507 7 HOH HOH . E 5 HOH A 8 508 8 HOH HOH . E 5 HOH A 9 509 9 HOH HOH . E 5 HOH A 10 510 10 HOH HOH . E 5 HOH A 11 511 11 HOH HOH . E 5 HOH A 12 512 12 HOH HOH . E 5 HOH A 13 513 13 HOH HOH . E 5 HOH A 14 514 14 HOH HOH . E 5 HOH A 15 515 15 HOH HOH . E 5 HOH A 16 516 16 HOH HOH . E 5 HOH A 17 517 17 HOH HOH . E 5 HOH A 18 518 18 HOH HOH . E 5 HOH A 19 519 19 HOH HOH . E 5 HOH A 20 520 20 HOH HOH . E 5 HOH A 21 521 21 HOH HOH . E 5 HOH A 22 522 22 HOH HOH . E 5 HOH A 23 523 23 HOH HOH . E 5 HOH A 24 524 24 HOH HOH . E 5 HOH A 25 525 25 HOH HOH . E 5 HOH A 26 526 26 HOH HOH . E 5 HOH A 27 527 27 HOH HOH . E 5 HOH A 28 528 28 HOH HOH . E 5 HOH A 29 529 29 HOH HOH . E 5 HOH A 30 530 30 HOH HOH . E 5 HOH A 31 531 31 HOH HOH . E 5 HOH A 32 532 32 HOH HOH . E 5 HOH A 33 533 33 HOH HOH . E 5 HOH A 34 534 34 HOH HOH . E 5 HOH A 35 535 35 HOH HOH . E 5 HOH A 36 536 36 HOH HOH . E 5 HOH A 37 537 37 HOH HOH . E 5 HOH A 38 538 38 HOH HOH . E 5 HOH A 39 539 39 HOH HOH . E 5 HOH A 40 540 40 HOH HOH . E 5 HOH A 41 541 41 HOH HOH . E 5 HOH A 42 542 42 HOH HOH . E 5 HOH A 43 543 43 HOH HOH . E 5 HOH A 44 544 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 9PC . . . D 4 -2.349 6.116 23.566 1 23.62 ? C11 9PC 403 A 1 HETATM 2 C C12 9PC . . . D 4 -2.58 7.461 23.742 1 26.01 ? C12 9PC 403 A 1 HETATM 3 N N 9PC . . . D 4 5.629 15.213 21.186 1 26.2 ? N 9PC 403 A 1 HETATM 4 C C13 9PC . . . D 4 2.829 13.524 21.399 1 26.46 ? C13 9PC 403 A 1 HETATM 5 C C1 9PC . . . D 4 3.215 14.89 20.983 1 30.73 ? C1 9PC 403 A 1 HETATM 6 C C2 9PC . . . D 4 2.207 15.962 21.212 1 31.23 ? C2 9PC 403 A 1 HETATM 7 C C3 9PC . . . D 4 0.976 15.662 21.797 1 29.22 ? C3 9PC 403 A 1 HETATM 8 F F1 9PC . . . D 4 3.665 12.5 21.22 1 29.27 ? F1 9PC 403 A 1 HETATM 9 C C 9PC . . . D 4 4.571 15.166 20.366 1 31.78 ? C 9PC 403 A 1 HETATM 10 O O 9PC . . . D 4 4.677 15.336 19.15 1 29.61 ? O 9PC 403 A 1 HETATM 11 C C5 9PC . . . D 4 1.498 13.304 22.016 1 28.41 ? C5 9PC 403 A 1 HETATM 12 C C4 9PC . . . D 4 0.619 14.372 22.187 1 28.2 ? C4 9PC 403 A 1 HETATM 13 F F 9PC . . . D 4 2.476 17.232 20.871 1 31.66 ? F 9PC 403 A 1 HETATM 14 O O1 9PC . . . D 4 1.12 12.044 22.402 1 31.56 ? O1 9PC 403 A 1 HETATM 15 C C6 9PC . . . D 4 -0.281 11.77 22.443 1 32.53 ? C6 9PC 403 A 1 HETATM 16 C C7 9PC . . . D 4 -0.606 10.299 22.6 1 34.55 ? C7 9PC 403 A 1 HETATM 17 S S 9PC . . . D 4 0.462 9.097 21.906 1 35.9 ? S 9PC 403 A 1 HETATM 18 C C9 9PC . . . D 4 -0.513 7.852 22.474 1 28.15 ? C9 9PC 403 A 1 HETATM 19 N N2 9PC . . . D 4 -0.326 6.522 22.332 1 29.07 ? N2 9PC 403 A 1 HETATM 20 C C10 9PC . . . D 4 -1.228 5.665 22.866 1 28.23 ? C10 9PC 403 A 1 HETATM 21 CL CL 9PC . . . D 4 -3.54 4.995 24.281 1 26.93 ? CL 9PC 403 A 1 HETATM 22 C C8 9PC . . . D 4 -1.686 8.363 23.211 1 29.3 ? C8 9PC 403 A 1 HETATM 23 N N1 9PC . . . D 4 -1.658 9.728 23.251 1 35.63 ? N1 9PC 403 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #