data_3VOH
#
_model_server_result.job_id            1xX5orwseXsLUeBO_ufYSg 
_model_server_result.datetime_utc      '2024-11-28 18:58:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3voh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1003}' 
#
_entry.id    3VOH 
#
_exptl.entry_id    3VOH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3VOH 
_cell.length_a            45.619 
_cell.length_b            72.14 
_cell.length_c            104.661 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3VOH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 BGC BGC C1 O1 . O4 HO4 . sing 
2 ? 3 2 1 BGC BGC C1 O1 . O4 HO4 . sing 
3 ? 3 3 2 BGC BGC C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B BGC 1 B 1 BGC B 1001 CBI 
2 n B BGC 2 B 2 BGC B 1001 CBI 
3 n C BGC 1 C 1 BGC B 1002 CTR 
3 n C BGC 2 C 2 BGC B 1002 CTR 
3 n C BGC 3 C 3 BGC B 1002 CTR 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 94 A CYS 165 1_555 A SG CYS 153 A CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf2 A SG CYS 284 A CYS 355 1_555 A SG CYS 331 A CYS 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
covale ? covale1 B O4 BGC . B BGC 1 1_555 B C1 BGC . B BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 sing 
covale ? covale2 C O4 BGC . C BGC 1 1_555 C C1 BGC . C BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 sing 
covale ? covale3 C O4 BGC . C BGC 2 1_555 C C1 BGC . C BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 sing 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                BGC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-glucose;D-glucose;glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 BGC sing 70 n n 
C2 C1 BGC sing 71 n n 
C2 O2 BGC sing 72 n n 
C2 H2 BGC sing 73 n n 
C3 C4 BGC sing 74 n n 
C3 O3 BGC sing 75 n n 
C3 H3 BGC sing 76 n n 
C4 C5 BGC sing 77 n n 
C4 O4 BGC sing 78 n n 
C4 H4 BGC sing 79 n n 
C5 C6 BGC sing 80 n n 
C5 O5 BGC sing 81 n n 
C5 H5 BGC sing 82 n n 
C6 O6 BGC sing 83 n n 
C6 H61 BGC sing 84 n n 
C6 H62 BGC sing 85 n n 
C1 O1 BGC sing 86 n n 
C1 O5 BGC sing 87 n n 
C1 H1 BGC sing 88 n n 
O1 HO1 BGC sing 89 n n 
O2 HO2 BGC sing 90 n n 
O3 HO3 BGC sing 91 n n 
O4 HO4 BGC sing 92 n n 
O6 HO6 BGC sing 93 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
BGC b-D-glucopyranose 'COMMON NAME' GMML 1 
BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3VOH 
_atom_sites.fract_transf_matrix[1][1]    0.021921 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013862 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009555 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 BGC A 1 1003 2001 BGC BGC . 
E 5 HOH A 1 1101 1 HOH HOH . 
E 5 HOH A 2 1102 2 HOH HOH . 
E 5 HOH A 3 1103 3 HOH HOH . 
E 5 HOH A 4 1104 4 HOH HOH . 
E 5 HOH A 5 1105 5 HOH HOH . 
E 5 HOH A 6 1106 6 HOH HOH . 
E 5 HOH A 7 1107 7 HOH HOH . 
E 5 HOH A 8 1108 8 HOH HOH . 
E 5 HOH A 9 1109 9 HOH HOH . 
E 5 HOH A 10 1110 10 HOH HOH . 
E 5 HOH A 11 1111 11 HOH HOH . 
E 5 HOH A 12 1112 12 HOH HOH . 
E 5 HOH A 13 1113 13 HOH HOH . 
E 5 HOH A 14 1114 14 HOH HOH . 
E 5 HOH A 15 1115 15 HOH HOH . 
E 5 HOH A 16 1116 16 HOH HOH . 
E 5 HOH A 17 1117 17 HOH HOH . 
E 5 HOH A 18 1118 18 HOH HOH . 
E 5 HOH A 19 1119 19 HOH HOH . 
E 5 HOH A 20 1120 20 HOH HOH . 
E 5 HOH A 21 1121 21 HOH HOH . 
E 5 HOH A 22 1122 22 HOH HOH . 
E 5 HOH A 23 1123 23 HOH HOH . 
E 5 HOH A 24 1124 24 HOH HOH . 
E 5 HOH A 25 1125 25 HOH HOH . 
E 5 HOH A 26 1126 26 HOH HOH . 
E 5 HOH A 27 1127 27 HOH HOH . 
E 5 HOH A 28 1128 28 HOH HOH . 
E 5 HOH A 29 1129 29 HOH HOH . 
E 5 HOH A 30 1130 30 HOH HOH . 
E 5 HOH A 31 1131 31 HOH HOH . 
E 5 HOH A 32 1132 32 HOH HOH . 
E 5 HOH A 33 1133 33 HOH HOH . 
E 5 HOH A 34 1134 34 HOH HOH . 
E 5 HOH A 35 1135 35 HOH HOH . 
E 5 HOH A 36 1136 36 HOH HOH . 
E 5 HOH A 37 1137 37 HOH HOH . 
E 5 HOH A 38 1138 38 HOH HOH . 
E 5 HOH A 39 1139 39 HOH HOH . 
E 5 HOH A 40 1140 40 HOH HOH . 
E 5 HOH A 41 1141 41 HOH HOH . 
E 5 HOH A 42 1142 42 HOH HOH . 
E 5 HOH A 43 1143 43 HOH HOH . 
E 5 HOH A 44 1144 44 HOH HOH . 
E 5 HOH A 45 1145 45 HOH HOH . 
E 5 HOH A 46 1146 46 HOH HOH . 
E 5 HOH A 47 1147 47 HOH HOH . 
E 5 HOH A 48 1148 48 HOH HOH . 
E 5 HOH A 49 1149 49 HOH HOH . 
E 5 HOH A 50 1150 50 HOH HOH . 
E 5 HOH A 51 1151 51 HOH HOH . 
E 5 HOH A 52 1152 52 HOH HOH . 
E 5 HOH A 53 1153 53 HOH HOH . 
E 5 HOH A 54 1154 54 HOH HOH . 
E 5 HOH A 55 1155 55 HOH HOH . 
E 5 HOH A 56 1156 56 HOH HOH . 
E 5 HOH A 57 1157 57 HOH HOH . 
E 5 HOH A 58 1158 58 HOH HOH . 
E 5 HOH A 59 1159 59 HOH HOH . 
E 5 HOH A 60 1160 60 HOH HOH . 
E 5 HOH A 61 1161 61 HOH HOH . 
E 5 HOH A 62 1162 62 HOH HOH . 
E 5 HOH A 63 1163 63 HOH HOH . 
E 5 HOH A 64 1164 64 HOH HOH . 
E 5 HOH A 65 1165 65 HOH HOH . 
E 5 HOH A 66 1166 66 HOH HOH . 
E 5 HOH A 67 1167 67 HOH HOH . 
E 5 HOH A 68 1168 68 HOH HOH . 
E 5 HOH A 69 1169 69 HOH HOH . 
E 5 HOH A 70 1170 70 HOH HOH . 
E 5 HOH A 71 1171 71 HOH HOH . 
E 5 HOH A 72 1172 72 HOH HOH . 
E 5 HOH A 73 1173 73 HOH HOH . 
E 5 HOH A 74 1174 74 HOH HOH . 
E 5 HOH A 75 1175 75 HOH HOH . 
E 5 HOH A 76 1176 76 HOH HOH . 
E 5 HOH A 77 1177 77 HOH HOH . 
E 5 HOH A 78 1178 78 HOH HOH . 
E 5 HOH A 79 1179 79 HOH HOH . 
E 5 HOH A 80 1180 80 HOH HOH . 
E 5 HOH A 81 1181 81 HOH HOH . 
E 5 HOH A 82 1182 82 HOH HOH . 
E 5 HOH A 83 1183 83 HOH HOH . 
E 5 HOH A 84 1184 84 HOH HOH . 
E 5 HOH A 85 1185 85 HOH HOH . 
E 5 HOH A 86 1186 86 HOH HOH . 
E 5 HOH A 87 1187 87 HOH HOH . 
E 5 HOH A 88 1188 88 HOH HOH . 
E 5 HOH A 89 1189 89 HOH HOH . 
E 5 HOH A 90 1190 90 HOH HOH . 
E 5 HOH A 91 1191 91 HOH HOH . 
E 5 HOH A 92 1192 92 HOH HOH . 
E 5 HOH A 93 1193 93 HOH HOH . 
E 5 HOH A 94 1194 94 HOH HOH . 
E 5 HOH A 95 1195 95 HOH HOH . 
E 5 HOH A 96 1196 96 HOH HOH . 
E 5 HOH A 97 1197 97 HOH HOH . 
E 5 HOH A 98 1198 98 HOH HOH . 
E 5 HOH A 99 1199 99 HOH HOH . 
E 5 HOH A 100 1200 100 HOH HOH . 
E 5 HOH A 101 1201 101 HOH HOH . 
E 5 HOH A 102 1202 102 HOH HOH . 
E 5 HOH A 103 1203 103 HOH HOH . 
E 5 HOH A 104 1204 104 HOH HOH . 
E 5 HOH A 105 1205 105 HOH HOH . 
E 5 HOH A 106 1206 106 HOH HOH . 
E 5 HOH A 107 1207 107 HOH HOH . 
E 5 HOH A 108 1208 108 HOH HOH . 
E 5 HOH A 109 1209 109 HOH HOH . 
E 5 HOH A 110 1210 110 HOH HOH . 
E 5 HOH A 111 1211 111 HOH HOH . 
E 5 HOH A 112 1212 112 HOH HOH . 
E 5 HOH A 113 1213 113 HOH HOH . 
E 5 HOH A 114 1214 114 HOH HOH . 
E 5 HOH A 115 1215 115 HOH HOH . 
E 5 HOH A 116 1216 116 HOH HOH . 
E 5 HOH A 117 1217 117 HOH HOH . 
E 5 HOH A 118 1218 118 HOH HOH . 
E 5 HOH A 119 1219 119 HOH HOH . 
E 5 HOH A 120 1220 120 HOH HOH . 
E 5 HOH A 121 1221 121 HOH HOH . 
E 5 HOH A 122 1222 122 HOH HOH . 
E 5 HOH A 123 1223 123 HOH HOH . 
E 5 HOH A 124 1224 124 HOH HOH . 
E 5 HOH A 125 1225 125 HOH HOH . 
E 5 HOH A 126 1226 126 HOH HOH . 
E 5 HOH A 127 1227 127 HOH HOH . 
E 5 HOH A 128 1228 128 HOH HOH . 
E 5 HOH A 129 1229 129 HOH HOH . 
E 5 HOH A 130 1230 130 HOH HOH . 
E 5 HOH A 131 1231 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 BGC . . . D 4 2.957 10.453 -34.916 1 62.05 ? C2 BGC 1003 A 1 
HETATM 2 C C3 BGC . . . D 4 1.774 11.42 -35.005 1 61.82 ? C3 BGC 1003 A 1 
HETATM 3 C C4 BGC . . . D 4 0.531 10.6 -35.377 1 62.15 ? C4 BGC 1003 A 1 
HETATM 4 C C5 BGC . . . D 4 0.278 9.637 -34.216 1 61.84 ? C5 BGC 1003 A 1 
HETATM 5 C C6 BGC . . . D 4 -1.083 8.956 -34.314 1 61.97 ? C6 BGC 1003 A 1 
HETATM 6 C C1 BGC . . . D 4 2.649 9.265 -33.982 1 62.18 ? C1 BGC 1003 A 1 
HETATM 7 O O1 BGC . . . D 4 3.656 8.265 -34.172 1 61.42 ? O1 BGC 1003 A 1 
HETATM 8 O O2 BGC . . . D 4 4.135 11.146 -34.46 1 62.01 ? O2 BGC 1003 A 1 
HETATM 9 O O3 BGC . . . D 4 2.05 12.473 -35.939 1 61.6 ? O3 BGC 1003 A 1 
HETATM 10 O O4 BGC . . . D 4 -0.63 11.399 -35.675 1 62.18 ? O4 BGC 1003 A 1 
HETATM 11 O O5 BGC . . . D 4 1.348 8.679 -34.201 1 62.03 ? O5 BGC 1003 A 1 
HETATM 12 O O6 BGC . . . D 4 -2.063 9.767 -33.663 1 61.24 ? O6 BGC 1003 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           64 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           374 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           12 
#